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Spg005371 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg005371
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionMADS-box domain-containing protein
Genome locationscaffold5:5460792..5461139
RNA-Seq ExpressionSpg005371
SyntenySpg005371
Gene Ontology termsGO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR002100 - Transcription factor, MADS-box
IPR033897 - MADS SRF-like
IPR036879 - Transcription factor, MADS-box superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596626.1 Agamous-like MADS-box protein AGL80, partial [Cucurbita argyrosperma subsp. sororia]5.5e-5397.32Show/hide
Query:  MTRKKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDDHPVIWPSLSAAQHLYRRFHSLPEVERQKKLTNQETYLKERTAKAQDL
        MTRKKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDD+PVIWPSLSAAQHLYRRFHSLPEVERQKK+TNQETYLKERTAKAQDL
Subjt:  MTRKKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDDHPVIWPSLSAAQHLYRRFHSLPEVERQKKLTNQETYLKERTAKAQDL

Query:  LKKHIKKNQELE
        LKKH+KKNQELE
Subjt:  LKKHIKKNQELE

KAG7028164.1 Agamous-like MADS-box protein AGL80, partial [Cucurbita argyrosperma subsp. argyrosperma]5.5e-5397.32Show/hide
Query:  MTRKKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDDHPVIWPSLSAAQHLYRRFHSLPEVERQKKLTNQETYLKERTAKAQDL
        MTRKKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDD+PVIWPSLSAAQHLYRRFHSLPEVERQKK+TNQETYLKERTAKAQDL
Subjt:  MTRKKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDDHPVIWPSLSAAQHLYRRFHSLPEVERQKKLTNQETYLKERTAKAQDL

Query:  LKKHIKKNQELE
        LKKH+KKNQELE
Subjt:  LKKHIKKNQELE

XP_022936706.1 MADS-box transcription factor PHERES 1-like [Cucurbita moschata]5.5e-5397.32Show/hide
Query:  MTRKKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDDHPVIWPSLSAAQHLYRRFHSLPEVERQKKLTNQETYLKERTAKAQDL
        MTRKKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDD+PVIWPSLSAAQHLYRRFHSLPEVERQKK+TNQETYLKERTAKAQDL
Subjt:  MTRKKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDDHPVIWPSLSAAQHLYRRFHSLPEVERQKKLTNQETYLKERTAKAQDL

Query:  LKKHIKKNQELE
        LKKH+KKNQELE
Subjt:  LKKHIKKNQELE

XP_023005873.1 uncharacterized protein LOC111498747 [Cucurbita maxima]5.5e-5397.32Show/hide
Query:  MTRKKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDDHPVIWPSLSAAQHLYRRFHSLPEVERQKKLTNQETYLKERTAKAQDL
        MTRKKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDD+PVIWPSLSAAQHLYRRFHSLPEVERQKK+TNQETYLKERTAKAQDL
Subjt:  MTRKKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDDHPVIWPSLSAAQHLYRRFHSLPEVERQKKLTNQETYLKERTAKAQDL

Query:  LKKHIKKNQELE
        LKKH+KKNQELE
Subjt:  LKKHIKKNQELE

XP_023539789.1 uncharacterized protein LOC111800368 [Cucurbita pepo subsp. pepo]5.5e-5397.32Show/hide
Query:  MTRKKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDDHPVIWPSLSAAQHLYRRFHSLPEVERQKKLTNQETYLKERTAKAQDL
        MTRKKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDD+PVIWPSLSAAQHLYRRFHSLPEVERQKK+TNQETYLKERTAKAQDL
Subjt:  MTRKKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDDHPVIWPSLSAAQHLYRRFHSLPEVERQKKLTNQETYLKERTAKAQDL

Query:  LKKHIKKNQELE
        LKKH+KKNQELE
Subjt:  LKKHIKKNQELE

TrEMBL top hitse value%identityAlignment
A0A0A0LB39 MADS-box domain-containing protein1.1e-5194.64Show/hide
Query:  MTRKKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDDHPVIWPSLSAAQHLYRRFHSLPEVERQKKLTNQETYLKERTAKAQDL
        MTRKKVKLVWIASDNARKASFKKRRLGL+KKVSELTTLCGVYAFAVV GPD+DHPVIWPSLSAAQHLYRRFHSLPEVERQKK+TNQETYLKERT K QDL
Subjt:  MTRKKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDDHPVIWPSLSAAQHLYRRFHSLPEVERQKKLTNQETYLKERTAKAQDL

Query:  LKKHIKKNQELE
        LKKHIKKNQELE
Subjt:  LKKHIKKNQELE

A0A1S3B6W2 uncharacterized protein LOC1034866911.5e-5193.75Show/hide
Query:  MTRKKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDDHPVIWPSLSAAQHLYRRFHSLPEVERQKKLTNQETYLKERTAKAQDL
        MTRKKVKLVWIASDNARKASFKKRRLGL+KKVSELTTLCGVYAFAV+ GPD+DHPVIWPSLSAAQHLYRRFHSLPEVERQKK+TNQETYLKERT K QDL
Subjt:  MTRKKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDDHPVIWPSLSAAQHLYRRFHSLPEVERQKKLTNQETYLKERTAKAQDL

Query:  LKKHIKKNQELE
        LKKHIKKNQELE
Subjt:  LKKHIKKNQELE

A0A6J1DC53 uncharacterized protein LOC1110193632.8e-5093.75Show/hide
Query:  MTRKKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDDHPVIWPSLSAAQHLYRRFHSLPEVERQKKLTNQETYLKERTAKAQDL
        MTRKKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVV+GPDDDHPVIWPS SAAQ LYRRF SLPEVERQKK+TNQETYLKERTAKAQD 
Subjt:  MTRKKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDDHPVIWPSLSAAQHLYRRFHSLPEVERQKKLTNQETYLKERTAKAQDL

Query:  LKKHIKKNQELE
        LKKHIKKNQ+LE
Subjt:  LKKHIKKNQELE

A0A6J1F887 MADS-box transcription factor PHERES 1-like2.7e-5397.32Show/hide
Query:  MTRKKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDDHPVIWPSLSAAQHLYRRFHSLPEVERQKKLTNQETYLKERTAKAQDL
        MTRKKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDD+PVIWPSLSAAQHLYRRFHSLPEVERQKK+TNQETYLKERTAKAQDL
Subjt:  MTRKKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDDHPVIWPSLSAAQHLYRRFHSLPEVERQKKLTNQETYLKERTAKAQDL

Query:  LKKHIKKNQELE
        LKKH+KKNQELE
Subjt:  LKKHIKKNQELE

A0A6J1L3D4 uncharacterized protein LOC1114987472.7e-5397.32Show/hide
Query:  MTRKKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDDHPVIWPSLSAAQHLYRRFHSLPEVERQKKLTNQETYLKERTAKAQDL
        MTRKKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDD+PVIWPSLSAAQHLYRRFHSLPEVERQKK+TNQETYLKERTAKAQDL
Subjt:  MTRKKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDDHPVIWPSLSAAQHLYRRFHSLPEVERQKKLTNQETYLKERTAKAQDL

Query:  LKKHIKKNQELE
        LKKH+KKNQELE
Subjt:  LKKHIKKNQELE

SwissProt top hitse value%identityAlignment
Q7XJK5 Agamous-like MADS-box protein AGL904.6e-1844.95Show/hide
Query:  KKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDDHPVIWPSLSAAQHLYRRFHSLPEVERQKKLTNQETYLKERTAKAQDLLKK
        KKVKL  IA++ +RK SF KR+ G+ KK+ EL+TLCGV A A++Y P    P  WPS   A+ +  +F  +P   R +K+ +QET+L ER  KA++ LK 
Subjt:  KKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDDHPVIWPSLSAAQHLYRRFHSLPEVERQKKLTNQETYLKERTAKAQDLLKK

Query:  HIKKNQELE
           +N+EL+
Subjt:  HIKKNQELE

Q7XJK6 Agamous-like MADS-box protein AGL367.1e-1947.71Show/hide
Query:  KKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDDHPVIWPSLSAAQHLYRRFHSLPEVERQKKLTNQETYLKERTAKAQDLLKK
        KKVKL  IA++ +RK SF KR+ G+ KK+ EL+TLCGV A A++Y P    P  WPS   A+ +  RF  +P   R KK+ +QETYL ER  KA++ LK 
Subjt:  KKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDDHPVIWPSLSAAQHLYRRFHSLPEVERQKKLTNQETYLKERTAKAQDLLKK

Query:  HIKKNQELE
           +N+EL+
Subjt:  HIKKNQELE

Q7XJK8 MADS-box transcription factor PHERES 21.6e-1541.58Show/hide
Query:  RKKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDDHPVIWPSLSAAQHLYRRFHSLPEVERQKKLTNQETYLKERTAKAQDLLK
        ++K+KL  I +  +RK +F KR+ G+ KK++EL TLCGV A AVVY P +  P  WPS    + +  +F  L  ++R KK+ +QET++ +R AK ++ L+
Subjt:  RKKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDDHPVIWPSLSAAQHLYRRFHSLPEVERQKKLTNQETYLKERTAKAQDLLK

Query:  K
        K
Subjt:  K

Q9C6V4 Agamous-like MADS-box protein AGL924.7e-1539.09Show/hide
Query:  RKKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDDHPVIWPSLSAAQHLYRRFHSLPEVERQKKLTNQETYLKERTAKAQDLLK
        R K KLV I   + R+A+F+KR  G+ KK+ ELTTLC + A AV+Y P  ++P +WPS    Q +   F   P  ER K + + ET+L+++  K Q+ L+
Subjt:  RKKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDDHPVIWPSLSAAQHLYRRFHSLPEVERQKKLTNQETYLKERTAKAQDLLK

Query:  KHIKKNQELE
           ++N+E +
Subjt:  KHIKKNQELE

Q9FJK3 Agamous-like MADS-box protein AGL808.3e-2852.63Show/hide
Query:  MTRKKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDDHPVIWPSLSAAQHLYRRFHSLPEVERQKKLTNQETYLKERTAKAQDL
        MTRKKVKL +I++D++RKA+FKKR+ GLMKKV EL+TLCG+ A A++Y P D +P +WPS S  Q +   F +LPE+++ KK+ +QE +LK+R AKA + 
Subjt:  MTRKKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDDHPVIWPSLSAAQHLYRRFHSLPEVERQKKLTNQETYLKERTAKAQDL

Query:  LKKHIKKNQELEST
        L++  K ++ELE T
Subjt:  LKKHIKKNQELEST

Arabidopsis top hitse value%identityAlignment
AT2G40210.1 AGAMOUS-like 486.8e-2551.82Show/hide
Query:  MTRKKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDDHPVIWPSLSAAQHLYRRFHSLPEVERQKKLTNQETYLKERTAKAQDL
        MTRKKVKLVWI +D +R  S +K R+GL+KKV ELT LC V A  +++ PD   P++WPS  A   L   F +LP+  ++KK +N E+YLKE+T K Q+ 
Subjt:  MTRKKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDDHPVIWPSLSAAQHLYRRFHSLPEVERQKKLTNQETYLKERTAKAQDL

Query:  LKKHIKKNQE
        LKK  KKN+E
Subjt:  LKKHIKKNQE

AT5G26630.1 MADS-box transcription factor family protein4.1e-2246.43Show/hide
Query:  MTRKKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDDHPVIWPSLSAAQHLYRRFHSLPEVERQKKLTNQETYLKERTAKAQDL
        MTR+KVK+ +I ++ ARK++FKKR+ GL+KK  EL  LCGV  FAVV  P + +P +WPS  AA  +  ++ ++  +++ KK+ NQET+L++R  KA + 
Subjt:  MTRKKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDDHPVIWPSLSAAQHLYRRFHSLPEVERQKKLTNQETYLKERTAKAQDL

Query:  LKKHIKKNQELE
         KK  K+N+ELE
Subjt:  LKKHIKKNQELE

AT5G26650.1 AGAMOUS-like 365.0e-2047.71Show/hide
Query:  KKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDDHPVIWPSLSAAQHLYRRFHSLPEVERQKKLTNQETYLKERTAKAQDLLKK
        KKVKL  IA++ +RK SF KR+ G+ KK+ EL+TLCGV A A++Y P    P  WPS   A+ +  RF  +P   R KK+ +QETYL ER  KA++ LK 
Subjt:  KKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDDHPVIWPSLSAAQHLYRRFHSLPEVERQKKLTNQETYLKERTAKAQDLLKK

Query:  HIKKNQELE
           +N+EL+
Subjt:  HIKKNQELE

AT5G27960.1 AGAMOUS-like 903.3e-1944.95Show/hide
Query:  KKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDDHPVIWPSLSAAQHLYRRFHSLPEVERQKKLTNQETYLKERTAKAQDLLKK
        KKVKL  IA++ +RK SF KR+ G+ KK+ EL+TLCGV A A++Y P    P  WPS   A+ +  +F  +P   R +K+ +QET+L ER  KA++ LK 
Subjt:  KKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDDHPVIWPSLSAAQHLYRRFHSLPEVERQKKLTNQETYLKERTAKAQDLLKK

Query:  HIKKNQELE
           +N+EL+
Subjt:  HIKKNQELE

AT5G48670.1 AGAMOUS-like 805.9e-2952.63Show/hide
Query:  MTRKKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDDHPVIWPSLSAAQHLYRRFHSLPEVERQKKLTNQETYLKERTAKAQDL
        MTRKKVKL +I++D++RKA+FKKR+ GLMKKV EL+TLCG+ A A++Y P D +P +WPS S  Q +   F +LPE+++ KK+ +QE +LK+R AKA + 
Subjt:  MTRKKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDDHPVIWPSLSAAQHLYRRFHSLPEVERQKKLTNQETYLKERTAKAQDL

Query:  LKKHIKKNQELEST
        L++  K ++ELE T
Subjt:  LKKHIKKNQELEST


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGAGGAAGAAGGTGAAGCTCGTATGGATTGCAAGCGACAATGCAAGAAAAGCCAGTTTCAAGAAGCGAAGGCTCGGATTAATGAAGAAAGTGAGCGAACTCACCAC
TCTCTGCGGCGTTTACGCCTTCGCCGTCGTCTACGGCCCCGACGACGACCATCCGGTCATCTGGCCGTCCCTCTCCGCCGCTCAACACCTCTACAGACGCTTCCACAGCC
TGCCGGAGGTCGAACGCCAGAAGAAACTGACGAACCAAGAGACCTATCTCAAGGAACGCACCGCCAAGGCACAGGACCTGTTGAAGAAGCACATCAAGAAGAATCAGGAA
CTCGAATCGACCTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGACGAGGAAGAAGGTGAAGCTCGTATGGATTGCAAGCGACAATGCAAGAAAAGCCAGTTTCAAGAAGCGAAGGCTCGGATTAATGAAGAAAGTGAGCGAACTCACCAC
TCTCTGCGGCGTTTACGCCTTCGCCGTCGTCTACGGCCCCGACGACGACCATCCGGTCATCTGGCCGTCCCTCTCCGCCGCTCAACACCTCTACAGACGCTTCCACAGCC
TGCCGGAGGTCGAACGCCAGAAGAAACTGACGAACCAAGAGACCTATCTCAAGGAACGCACCGCCAAGGCACAGGACCTGTTGAAGAAGCACATCAAGAAGAATCAGGAA
CTCGAATCGACCTTCTGA
Protein sequenceShow/hide protein sequence
MTRKKVKLVWIASDNARKASFKKRRLGLMKKVSELTTLCGVYAFAVVYGPDDDHPVIWPSLSAAQHLYRRFHSLPEVERQKKLTNQETYLKERTAKAQDLLKKHIKKNQE
LESTF