CuGenDBv2

Gene ID	Spg005395
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Cell division cycle 20.2, cofactor of APC complex
Genome location	scaffold6:34701007..34707659
RNA-Seq Expression	Spg005395
Synteny	Spg005395
Gene Ontology terms	GO:0051301 - cell division (biological process) GO:1904668 - positive regulation of ubiquitin protein ligase activity (biological process) GO:1905786 - positive regulation of anaphase-promoting complex-dependent catabolic process (biological process) GO:0005680 - anaphase-promoting complex (cellular component) GO:0005515 - protein binding (molecular function) GO:0010997 - anaphase-promoting complex binding (molecular function) GO:1990757 - ubiquitin ligase activator activity (molecular function)
InterPro domains	IPR001680 - WD40 repeat IPR015943 - WD40/YVTN repeat-like-containing domain superfamily IPR033010 - The WD repeat Cdc20/Fizzy family IPR036322 - WD40-repeat-containing domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6605663.1 Cell division cycle 20.1, cofactor of APC complex, partial [Cucurbita argyrosperma subsp. sororia]

4.2e-41

90.91

Show/hide

Query:  HDNVLHVWDKSMASSNSVTQWLHRLEEHTSAVKALAWCPFQGNLLATGGGAGDRTIKFWNTHTGACLNSVDTGSQVCALLWNKNEKEL
        +DNVLH+WD+SMASSNS TQWLHRLE+HTSAVKALAWCPFQ NLLATGGGA DRTIKFWNTHTGACLNSVDTGSQVCALLWNKNE+EL
Subjt:  HDNVLHVWDKSMASSNSVTQWLHRLEEHTSAVKALAWCPFQGNLLATGGGAGDRTIKFWNTHTGACLNSVDTGSQVCALLWNKNEKEL

TXG47997.1 hypothetical protein EZV62_027291 [Acer yangbiense]

1.5e-41

90.91

Show/hide

Query:  HDNVLHVWDKSMASSNSVTQWLHRLEEHTSAVKALAWCPFQGNLLATGGGAGDRTIKFWNTHTGACLNSVDTGSQVCALLWNKNEKEL
        +DN+LH+WD+SMASSNS TQWLHRLEEHTSAVKALAWCPFQGNLLATGGG GDR IKFWNTHTGACLNS+DTGSQVCALLWNKNEKEL
Subjt:  HDNVLHVWDKSMASSNSVTQWLHRLEEHTSAVKALAWCPFQGNLLATGGGAGDRTIKFWNTHTGACLNSVDTGSQVCALLWNKNEKEL

XP_004149610.1 cell division cycle 20.2, cofactor of APC complex [Cucumis sativus]

1.7e-42

93.18

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Query:  HDNVLHVWDKSMASSNSVTQWLHRLEEHTSAVKALAWCPFQGNLLATGGGAGDRTIKFWNTHTGACLNSVDTGSQVCALLWNKNEKEL
        +DNVLH+WD+SMASSNS TQWLHRLE+HTSAVKALAWCPFQGNLLATGGGAGDRTIKFWNTHTGACLNSVDTGSQVCALLWNKNE+EL
Subjt:  HDNVLHVWDKSMASSNSVTQWLHRLEEHTSAVKALAWCPFQGNLLATGGGAGDRTIKFWNTHTGACLNSVDTGSQVCALLWNKNEKEL

XP_008461771.1 PREDICTED: cell division cycle 20.2, cofactor of APC complex-like [Cucumis melo]

2.9e-42

93.18

Show/hide

Query:  HDNVLHVWDKSMASSNSVTQWLHRLEEHTSAVKALAWCPFQGNLLATGGGAGDRTIKFWNTHTGACLNSVDTGSQVCALLWNKNEKEL
        +DNVLH+WD+SMASSNS TQWLHRLEEHTSAVKALAWCPFQGNLLATGGGAGDR IKFWNTHTGACLNSVDTGSQVCALLWNKNE+EL
Subjt:  HDNVLHVWDKSMASSNSVTQWLHRLEEHTSAVKALAWCPFQGNLLATGGGAGDRTIKFWNTHTGACLNSVDTGSQVCALLWNKNEKEL

XP_030533075.1 cell division cycle 20.2, cofactor of APC complex-like [Rhodamnia argentea]

2.5e-41

90.91

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Query:  HDNVLHVWDKSMASSNSVTQWLHRLEEHTSAVKALAWCPFQGNLLATGGGAGDRTIKFWNTHTGACLNSVDTGSQVCALLWNKNEKEL
        +DNVLH+WDKSMASSNS TQWLHRLEEHT+AVKALAWCPFQGNLLA+GGG GDRTIKFWNTHTGACLNS+DTGSQVCALLWNKNE+EL
Subjt:  HDNVLHVWDKSMASSNSVTQWLHRLEEHTSAVKALAWCPFQGNLLATGGGAGDRTIKFWNTHTGACLNSVDTGSQVCALLWNKNEKEL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LCG1 WD_REPEATS_REGION domain-containing protein

8.3e-43

93.18

Show/hide

Query:  HDNVLHVWDKSMASSNSVTQWLHRLEEHTSAVKALAWCPFQGNLLATGGGAGDRTIKFWNTHTGACLNSVDTGSQVCALLWNKNEKEL
        +DNVLH+WD+SMASSNS TQWLHRLE+HTSAVKALAWCPFQGNLLATGGGAGDRTIKFWNTHTGACLNSVDTGSQVCALLWNKNE+EL
Subjt:  HDNVLHVWDKSMASSNSVTQWLHRLEEHTSAVKALAWCPFQGNLLATGGGAGDRTIKFWNTHTGACLNSVDTGSQVCALLWNKNEKEL

A0A1S3CFY1 cell division cycle 20.2, cofactor of APC complex-like

1.4e-42

93.18

Show/hide

Query:  HDNVLHVWDKSMASSNSVTQWLHRLEEHTSAVKALAWCPFQGNLLATGGGAGDRTIKFWNTHTGACLNSVDTGSQVCALLWNKNEKEL
        +DNVLH+WD+SMASSNS TQWLHRLEEHTSAVKALAWCPFQGNLLATGGGAGDR IKFWNTHTGACLNSVDTGSQVCALLWNKNE+EL
Subjt:  HDNVLHVWDKSMASSNSVTQWLHRLEEHTSAVKALAWCPFQGNLLATGGGAGDRTIKFWNTHTGACLNSVDTGSQVCALLWNKNEKEL

A0A5C7GU38 WD_REPEATS_REGION domain-containing protein

7.1e-42

90.91

Show/hide

Query:  HDNVLHVWDKSMASSNSVTQWLHRLEEHTSAVKALAWCPFQGNLLATGGGAGDRTIKFWNTHTGACLNSVDTGSQVCALLWNKNEKEL
        +DN+LH+WD+SMASSNS TQWLHRLEEHTSAVKALAWCPFQGNLLATGGG GDR IKFWNTHTGACLNS+DTGSQVCALLWNKNEKEL
Subjt:  HDNVLHVWDKSMASSNSVTQWLHRLEEHTSAVKALAWCPFQGNLLATGGGAGDRTIKFWNTHTGACLNSVDTGSQVCALLWNKNEKEL

A0A5D3CHD8 Cell division cycle 20.2, cofactor of APC complex-like

1.4e-42

93.18

Show/hide

Query:  HDNVLHVWDKSMASSNSVTQWLHRLEEHTSAVKALAWCPFQGNLLATGGGAGDRTIKFWNTHTGACLNSVDTGSQVCALLWNKNEKEL
        +DNVLH+WD+SMASSNS TQWLHRLEEHTSAVKALAWCPFQGNLLATGGGAGDR IKFWNTHTGACLNSVDTGSQVCALLWNKNE+EL
Subjt:  HDNVLHVWDKSMASSNSVTQWLHRLEEHTSAVKALAWCPFQGNLLATGGGAGDRTIKFWNTHTGACLNSVDTGSQVCALLWNKNEKEL

A0A6J1JY99 cell division cycle 20.2, cofactor of APC complex-like

2.1e-41

90.91

Show/hide

Query:  HDNVLHVWDKSMASSNSVTQWLHRLEEHTSAVKALAWCPFQGNLLATGGGAGDRTIKFWNTHTGACLNSVDTGSQVCALLWNKNEKEL
        +DNVLH+WD+SMASSNS TQWLHRLE+HTSAVKALAWCPFQ NLLATGGGA DRTIKFWNTHTGACLNSVDTGSQVCALLWNKNE+EL
Subjt:  HDNVLHVWDKSMASSNSVTQWLHRLEEHTSAVKALAWCPFQGNLLATGGGAGDRTIKFWNTHTGACLNSVDTGSQVCALLWNKNEKEL

SwissProt top hits

e value

%identity

Alignment

F4K5R6 Cell division cycle 20.6, cofactor of APC complex

8.6e-37

Show/hide

Query:  HDNVLHVWDKSMASSNSVTQWLHRLEEHTSAVKALAWCPFQGNLLATGGGAGDRTIKFWNTHTGACLNSVDTGSQVCALLWNKNEKEL
        +DNV+H+WD+S+ASSN   QWLHR EEHT+AV+ALAWCPFQ +LLATGGG GD  I FWNTHTGACLNSV+TGSQVC+LLW+K+E+EL
Subjt:  HDNVLHVWDKSMASSNSVTQWLHRLEEHTSAVKALAWCPFQGNLLATGGGAGDRTIKFWNTHTGACLNSVDTGSQVCALLWNKNEKEL

Q3E906 Cell division cycle 20.5, cofactor of APC complex

7.3e-36

75.28

Show/hide

Query:  HDNVLHVWD-KSMASSNSVTQWLHRLEEHTSAVKALAWCPFQGNLLATGGGAGDRTIKFWNTHTGACLNSVDTGSQVCALLWNKNEKEL
        +DNV+H+WD +S+ASSN   QWLHR EEHT+AV+ALAWCPFQ +LLATGGG GD  IKFWNTHTGACLNSV+TGSQVC+LLW+K+E+EL
Subjt:  HDNVLHVWD-KSMASSNSVTQWLHRLEEHTSAVKALAWCPFQGNLLATGGGAGDRTIKFWNTHTGACLNSVDTGSQVCALLWNKNEKEL

Q4PSE4 Cell division cycle 20.4, cofactor of APC complex

2.5e-36

73.86

Show/hide

Query:  HDNVLHVWDKSMASSNSVTQWLHRLEEHTSAVKALAWCPFQGNLLATGGGAGDRTIKFWNTHTGACLNSVDTGSQVCALLWNKNEKEL
        +DNV+H+WD+S+ASS    QWLHR EEHT+AV+ALAWCPFQ +LLATGGG GD  IKFWNTHTGACLNSV+TGSQVC+LLW+++E+EL
Subjt:  HDNVLHVWDKSMASSNSVTQWLHRLEEHTSAVKALAWCPFQGNLLATGGGAGDRTIKFWNTHTGACLNSVDTGSQVCALLWNKNEKEL

Q9S7I8 Cell division cycle 20.2, cofactor of APC complex

8.0e-43

87.5

Show/hide

Query:  HDNVLHVWDKSMASSNSVTQWLHRLEEHTSAVKALAWCPFQGNLLATGGGAGDRTIKFWNTHTGACLNSVDTGSQVCALLWNKNEKEL
        +DNV+H+WD+S+ASSNS TQWLHRLEEHTSAVKALAWCPFQ NLLATGGG GDRTIKFWNTHTGACLNSVDTGSQVC+LLW+KNE+EL
Subjt:  HDNVLHVWDKSMASSNSVTQWLHRLEEHTSAVKALAWCPFQGNLLATGGGAGDRTIKFWNTHTGACLNSVDTGSQVCALLWNKNEKEL

Q9SZA4 Cell division cycle 20.1, cofactor of APC complex

8.0e-43

87.5

Show/hide

Query:  HDNVLHVWDKSMASSNSVTQWLHRLEEHTSAVKALAWCPFQGNLLATGGGAGDRTIKFWNTHTGACLNSVDTGSQVCALLWNKNEKEL
        +DNV+H+WD+S+ASSNS TQWLHRLEEHTSAVKALAWCPFQ NLLATGGG GDRTIKFWNTHTGACLNSVDTGSQVC+LLW+KNE+EL
Subjt:  HDNVLHVWDKSMASSNSVTQWLHRLEEHTSAVKALAWCPFQGNLLATGGGAGDRTIKFWNTHTGACLNSVDTGSQVCALLWNKNEKEL

Arabidopsis top hits

e value

%identity

Alignment

AT4G33260.1 Transducin family protein / WD-40 repeat family protein

5.7e-44

87.5

Show/hide

Query:  HDNVLHVWDKSMASSNSVTQWLHRLEEHTSAVKALAWCPFQGNLLATGGGAGDRTIKFWNTHTGACLNSVDTGSQVCALLWNKNEKEL
        +DNV+H+WD+S+ASSNS TQWLHRLEEHTSAVKALAWCPFQ NLLATGGG GDRTIKFWNTHTGACLNSVDTGSQVC+LLW+KNE+EL
Subjt:  HDNVLHVWDKSMASSNSVTQWLHRLEEHTSAVKALAWCPFQGNLLATGGGAGDRTIKFWNTHTGACLNSVDTGSQVCALLWNKNEKEL

AT4G33260.2 Transducin family protein / WD-40 repeat family protein

5.7e-44

87.5

Show/hide

Query:  HDNVLHVWDKSMASSNSVTQWLHRLEEHTSAVKALAWCPFQGNLLATGGGAGDRTIKFWNTHTGACLNSVDTGSQVCALLWNKNEKEL
        +DNV+H+WD+S+ASSNS TQWLHRLEEHTSAVKALAWCPFQ NLLATGGG GDRTIKFWNTHTGACLNSVDTGSQVC+LLW+KNE+EL
Subjt:  HDNVLHVWDKSMASSNSVTQWLHRLEEHTSAVKALAWCPFQGNLLATGGGAGDRTIKFWNTHTGACLNSVDTGSQVCALLWNKNEKEL

AT4G33270.1 Transducin family protein / WD-40 repeat family protein

5.7e-44

87.5

Show/hide

Query:  HDNVLHVWDKSMASSNSVTQWLHRLEEHTSAVKALAWCPFQGNLLATGGGAGDRTIKFWNTHTGACLNSVDTGSQVCALLWNKNEKEL
        +DNV+H+WD+S+ASSNS TQWLHRLEEHTSAVKALAWCPFQ NLLATGGG GDRTIKFWNTHTGACLNSVDTGSQVC+LLW+KNE+EL
Subjt:  HDNVLHVWDKSMASSNSVTQWLHRLEEHTSAVKALAWCPFQGNLLATGGGAGDRTIKFWNTHTGACLNSVDTGSQVCALLWNKNEKEL

AT5G26900.1 Transducin family protein / WD-40 repeat family protein

1.8e-37

73.86

Show/hide

Query:  HDNVLHVWDKSMASSNSVTQWLHRLEEHTSAVKALAWCPFQGNLLATGGGAGDRTIKFWNTHTGACLNSVDTGSQVCALLWNKNEKEL
        +DNV+H+WD+S+ASS    QWLHR EEHT+AV+ALAWCPFQ +LLATGGG GD  IKFWNTHTGACLNSV+TGSQVC+LLW+++E+EL
Subjt:  HDNVLHVWDKSMASSNSVTQWLHRLEEHTSAVKALAWCPFQGNLLATGGGAGDRTIKFWNTHTGACLNSVDTGSQVCALLWNKNEKEL

AT5G27945.1 Transducin/WD40 repeat-like superfamily protein

6.1e-38

Show/hide

Query:  HDNVLHVWDKSMASSNSVTQWLHRLEEHTSAVKALAWCPFQGNLLATGGGAGDRTIKFWNTHTGACLNSVDTGSQVCALLWNKNEKEL
        +DNV+H+WD+S+ASSN   QWLHR EEHT+AV+ALAWCPFQ +LLATGGG GD  I FWNTHTGACLNSV+TGSQVC+LLW+K+E+EL
Subjt:  HDNVLHVWDKSMASSNSVTQWLHRLEEHTSAVKALAWCPFQGNLLATGGGAGDRTIKFWNTHTGACLNSVDTGSQVCALLWNKNEKEL

Sequences

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CDS sequence

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ATGGTCAAGGGTCGGTGTGATGAGTCTAGAAAGCAAGTATTGGACGCTTGGGGAAGGTCCAATAAGTTTAAATCATCGGTGCACCTCGGGTACAAATGGCCAAGGGGCGA
CGTACAGTTTGAGGCCTTGGGTACAAATGGTCAAGGTTCGAATGCCGTGCTCCGTAGAGAGCATTGTGGCCCTAGGTACAAATGGTCAGGGACAGTGCGACTCGAAGGCA
AGTGTGAGCTGCTTACCAGTATCACGGTTGTACTGATACCCCCACTCTTTTCTTCCCCCAACATTTTAGAGGTTGCAAGTTTGGACGATGAGCTAGACCATGGTGAGCCT
CGCGCCGCCGCCGTTGGTCGCAGCACTGAGCCCCGTCGCAGCAACGCCGTCCCTTCGCCGCCTCTCTCCCTCTCTGTTCGTGTGATTTCGACTAAGGAAGCTCGTGGTTT
CGTGTCCGTCCAGCAGCGGAGTTTCCGTTTTCTCGCATTTTTGTCTCTGTCCAGCATCGTTTTCGAGCGTTTTCGGCGTCGTTTGGTGATTTCGAGTCGTAAAAGTGTTC
GATTGAGTTCGAATCACTTAAAGCTTGAATACCCATTGCCCAAGGATCGTTCTAGTGCGTTGTTCGAGGTTATTGTAACCCGTCTTGCGTGGAAACGGGTTCGTTGGGCA
AGGAGCTTATCTAAATCTCTTGAGCAGTTTAAGGAGTTCTTAGGAGTGCTCGTAAGCTTTTCGTTGCGTTGCATGGCGCGGAATTCATGTGCATTGGTGCGTGGCATGAC
GCGTAAATCATGTGCTAAGAAAGCGAGCATGGCGCGGAATCCATGTGGGTTGCATAGCATGTCGTGTGTTTACATGAGCCATTCTTTTGAGTTAACAAGAGTTTTGTTGA
TGAGTTATCGTTTTGTGGAGCATGATTATGTGTTGGCGGATATTATGAGCCCGGTGGTGCTGACGAGGAGACACACGAGGAGTGACTCCACTGGCCTAGGCATTTTTTTA
GTTGTGAATGCGAGTGTCGTTGCTGCCTCTCTCCCATTCACTGTTGGCGCTGCTGTCGTCTTTCTTACGCTTGTGCCACCACCACCTTTGTCTTTCTTTCTTTCGTGCCG
TCGAAGCCTCCCTACTAGTGGTTTTGCACTGATTTTCTACTCCCCTCTTGTTCCTGGAGTGGCATCTGTCCCAGAAGATGCCATTGATCTGTCCCATGACAATGTCCTCC
ACGTCTGGGACAAATCAATGGCATCTTCAAACTCAGTGACCCAGTGGCTTCACAGGCTTGAGGAGCATACTTCTGCAGTCAAGGCTCTTGCATGGTGTCCATTCCAAGGT
AACTTGCTCGCAACAGGTGGAGGTGCTGGAGATCGCACCATAAAGTTTTGGAACACCCACACTGGCGCATGTTTGAATTCTGTCGATACTGGTTCTCAAGTCTGTGCTCT
ATTGTGGAACAAGAATGAGAAAGAGCTAAGCAGGAGAACTAAGCAGCTCTCTCTCATTCTTGTTCCACAATAG

mRNA sequence

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Protein sequence

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MVKGRCDESRKQVLDAWGRSNKFKSSVHLGYKWPRGDVQFEALGTNGQGSNAVLRREHCGPRYKWSGTVRLEGKCELLTSITVVLIPPLFSSPNILEVASLDDELDHGEP
RAAAVGRSTEPRRSNAVPSPPLSLSVRVISTKEARGFVSVQQRSFRFLAFLSLSSIVFERFRRRLVISSRKSVRLSSNHLKLEYPLPKDRSSALFEVIVTRLAWKRVRWA
RSLSKSLEQFKEFLGVLVSFSLRCMARNSCALVRGMTRKSCAKKASMARNPCGLHSMSCVYMSHSFELTRVLLMSYRFVEHDYVLADIMSPVVLTRRHTRSDSTGLGIFL
VVNASVVAASLPFTVGAAVVFLTLVPPPPLSFFLSCRRSLPTSGFALIFYSPLVPGVASVPEDAIDLSHDNVLHVWDKSMASSNSVTQWLHRLEEHTSAVKALAWCPFQG
NLLATGGGAGDRTIKFWNTHTGACLNSVDTGSQVCALLWNKNEKELSRRTKQLSLILVPQ

Spg005395 (gene) of Sponge gourd (cylindrica) v1 genome