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Spg005442 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg005442
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionkeratin, type II cytoskeletal 3 isoform X2
Genome locationscaffold7:27398340..27406318
RNA-Seq ExpressionSpg005442
SyntenySpg005442
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6592270.1 hypothetical protein SDJN03_14616, partial [Cucurbita argyrosperma subsp. sororia]1.2e-2091.38Show/hide
Query:  ARLGPGIPGLQLGFGFGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDLLHGHQSIFPQ
        A  GPGIPGLQLGFG GAGCGVGLGFGYG GRGIAQDDKRRYSNVGDLL+GHQSIFPQ
Subjt:  ARLGPGIPGLQLGFGFGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDLLHGHQSIFPQ
XP_023521208.1 ATP-dependent RNA helicase glh-2 isoform X1 [Cucurbita pepo subsp. pepo]1.2e-2089.83Show/hide
Query:  ARLGPGIPGLQLGFGFGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDLLHGHQSIFPQR
        A  GPGIPGLQLGFG GAGCGVGLGFGYG GRGIAQDDKRRYSNVGDLL+GHQSIFP R
Subjt:  ARLGPGIPGLQLGFGFGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDLLHGHQSIFPQR
XP_023521209.1 fibroin heavy chain isoform X2 [Cucurbita pepo subsp. pepo]1.2e-2091.38Show/hide
Query:  ARLGPGIPGLQLGFGFGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDLLHGHQSIFPQ
        A  GPGIPGLQLGFG GAGCGVGLGFGYG GRGIAQDDKRRYSNVGDLL+GHQSIFPQ
Subjt:  ARLGPGIPGLQLGFGFGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDLLHGHQSIFPQ
XP_038889093.1 ctenidin-1 isoform X1 [Benincasa hispida]3.7e-2293.22Show/hide
Query:  ARLGPGIPGLQLGFGFGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDLLHGHQSIFPQR
        A  GPGIPGLQLGFG GAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDLLHGHQSIFPQ+
Subjt:  ARLGPGIPGLQLGFGFGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDLLHGHQSIFPQR
XP_038889094.1 glycine-rich cell wall structural protein 1 isoform X2 [Benincasa hispida]6.3e-2294.83Show/hide
Query:  ARLGPGIPGLQLGFGFGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDLLHGHQSIFPQ
        A  GPGIPGLQLGFG GAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDLLHGHQSIFPQ
Subjt:  ARLGPGIPGLQLGFGFGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDLLHGHQSIFPQ
TrEMBL top hitse value%identityAlignment
A0A1S4E347 glycine-rich cell wall structural protein 11.7e-2088.14Show/hide
Query:  ARLGPGIPGLQLGFGFGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDLLHGHQSIFPQR
        A  GPGIPGLQLGFG GAGCGVGLGFGYGVGRGIAQDDKRRYSNVGD+L GHQSIFP +
Subjt:  ARLGPGIPGLQLGFGFGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDLLHGHQSIFPQR
A0A6J1EY31 keratin, type II cytoskeletal 2 epidermal isoform X14.9e-2088.14Show/hide
Query:  ARLGPGIPGLQLGFGFGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDLLHGHQSIFPQR
        A  GPGIPGLQLGFG GAGCGVGLGFGYG GRGIAQDDKRRYSNVGDLL+G QSIFP R
Subjt:  ARLGPGIPGLQLGFGFGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDLLHGHQSIFPQR
A0A6J1F360 keratin, type II cytoskeletal 2 epidermal isoform X24.9e-2089.66Show/hide
Query:  ARLGPGIPGLQLGFGFGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDLLHGHQSIFPQ
        A  GPGIPGLQLGFG GAGCGVGLGFGYG GRGIAQDDKRRYSNVGDLL+G QSIFPQ
Subjt:  ARLGPGIPGLQLGFGFGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDLLHGHQSIFPQ
A0A6J1IA95 keratin, type II cytoskeletal 3 isoform X24.9e-2089.66Show/hide
Query:  ARLGPGIPGLQLGFGFGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDLLHGHQSIFPQ
        A  GPGIPGLQLGFG GAGCGVGLGFGYG GRGIAQDDKRRYSNVGDLL+G QSIFPQ
Subjt:  ARLGPGIPGLQLGFGFGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDLLHGHQSIFPQ
A0A6J1ICW2 keratin, type II cytoskeletal 3 isoform X14.9e-2088.14Show/hide
Query:  ARLGPGIPGLQLGFGFGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDLLHGHQSIFPQR
        A  GPGIPGLQLGFG GAGCGVGLGFGYG GRGIAQDDKRRYSNVGDLL+G QSIFP R
Subjt:  ARLGPGIPGLQLGFGFGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDLLHGHQSIFPQR
SwissProt top hitse value%identityAlignment
B8AEH3 DNA replication licensing factor MCM55.1e-0678.12Show/hide
Query:  QDNIDLQTKILAIFDLIFIVKDIRMYSQDKDV
        QDNIDLQT IL+ FDLIFIVKD+RMY QDK +
Subjt:  QDNIDLQTKILAIFDLIFIVKDIRMYSQDKDV
O80786 DNA replication licensing factor MCM51.0e-0661.22Show/hide
Query:  QDNIDLQTKILAIFDLIFIVKDIRMYSQDKDVLLLITPFVIRITSDYSK
        QDNIDLQT IL+ FDLIFIVKDIR YSQDK+    I   +IR+ +  +K
Subjt:  QDNIDLQTKILAIFDLIFIVKDIRMYSQDKDVLLLITPFVIRITSDYSK
Q6KAJ4 DNA replication licensing factor MCM55.1e-0678.12Show/hide
Query:  QDNIDLQTKILAIFDLIFIVKDIRMYSQDKDV
        QDNIDLQT IL+ FDLIFIVKD+RMY QDK +
Subjt:  QDNIDLQTKILAIFDLIFIVKDIRMYSQDKDV
Arabidopsis top hitse value%identityAlignment
AT2G07690.1 Minichromosome maintenance (MCM2/3/5) family protein7.3e-0861.22Show/hide
Query:  QDNIDLQTKILAIFDLIFIVKDIRMYSQDKDVLLLITPFVIRITSDYSK
        QDNIDLQT IL+ FDLIFIVKDIR YSQDK+    I   +IR+ +  +K
Subjt:  QDNIDLQTKILAIFDLIFIVKDIRMYSQDKDVLLLITPFVIRITSDYSK
AT2G07690.2 Minichromosome maintenance (MCM2/3/5) family protein7.3e-0861.22Show/hide
Query:  QDNIDLQTKILAIFDLIFIVKDIRMYSQDKDVLLLITPFVIRITSDYSK
        QDNIDLQT IL+ FDLIFIVKDIR YSQDK+    I   +IR+ +  +K
Subjt:  QDNIDLQTKILAIFDLIFIVKDIRMYSQDKDVLLLITPFVIRITSDYSK
AT4G10330.1 glycine-rich protein1.3e-1274.42Show/hide
Query:  GPGIPGLQLGFGFGAGCGVGLGFGYGVGRGIAQDDKRRYSNVG
        GPG+PGLQ G GFGAGCG+G+GFGYGVGRG A D  R Y NVG
Subjt:  GPGIPGLQLGFGFGAGCGVGLGFGYGVGRGIAQDDKRRYSNVG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTATCATGCCAACATTATATGGCTTTGCATGTTCTAGTTGTCATCAATACGTTAGTATCTGTCAATTTTGATCGGAGTGAAAGTGAATATTTTGTGCAAAAAGAAAA
GTGGCTTGGTGGAGTTCTTTTGGTGGTTTCTTCACGCTTGGTTTTTCTTTTGGCTCAAAGTGGTAGTTTTCTTTTTGGTTTGCTGGAGCTTTTGGAGAGGCTGGCTAGTT
TTGTTGTTTGTGCTAGATTAGGTCCAGGAATTCCTGGCTTACAACTTGGCTTTGGTTTTGGTGCTGGATGTGGAGTTGGCTTAGGATTTGGTTATGGTGTTGGCAGGGGC
ATTGCCCAAGATGACAAACGAAGATACTCCAACGTTGGGGATCTATTACATGGTCATCAAAGTATTTTTCCTCAGAGGTTTCAAGAAAGTACATTTACTTGGAGAGGATC
ATTTTCAGTTGAGCTTTTGAAAAAGTTGAAAGCACATTTTTGGCCCACTGGTCTGAAGAAGGTGTGCTTATGGAATAGATTGCGACAGGATAACATTGATTTGCAGACAA
AAATTCTCGCCATATTTGATTTAATTTTCATCGTGAAAGATATAAGGATGTACAGTCAAGATAAGGACGTATTATTATTAATTACTCCCTTTGTAATTAGAATAACGAGT
GATTATAGCAAGCCACATTTGCTAATGCAACCTTGGGTGAAAGTAGAGCTTTTAAAGAAGAGAATTGGCTCAACAGGTGTTAGAAAATTTTGGGTTAGCCATATGTATGT
TGTTATGCTGTCGAAATTTTTGGAGTATCCGATTAGAATTAGGATAAAGGCTTTAGTAATGTCACTAGAAGGTAAAACACAAGTGGAGCCTTGGAGCACAAGAGGAGGCT
TGGAGTTCGATTTAACTTGGGATAAATCGGTGAAGCATGTACGATGTGATGAGGATTACTACAAATCGGGTGATGCTGAGGAGGAGGTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTATCATGCCAACATTATATGGCTTTGCATGTTCTAGTTGTCATCAATACGTTAGTATCTGTCAATTTTGATCGGAGTGAAAGTGAATATTTTGTGCAAAAAGAAAA
GTGGCTTGGTGGAGTTCTTTTGGTGGTTTCTTCACGCTTGGTTTTTCTTTTGGCTCAAAGTGGTAGTTTTCTTTTTGGTTTGCTGGAGCTTTTGGAGAGGCTGGCTAGTT
TTGTTGTTTGTGCTAGATTAGGTCCAGGAATTCCTGGCTTACAACTTGGCTTTGGTTTTGGTGCTGGATGTGGAGTTGGCTTAGGATTTGGTTATGGTGTTGGCAGGGGC
ATTGCCCAAGATGACAAACGAAGATACTCCAACGTTGGGGATCTATTACATGGTCATCAAAGTATTTTTCCTCAGAGGTTTCAAGAAAGTACATTTACTTGGAGAGGATC
ATTTTCAGTTGAGCTTTTGAAAAAGTTGAAAGCACATTTTTGGCCCACTGGTCTGAAGAAGGTGTGCTTATGGAATAGATTGCGACAGGATAACATTGATTTGCAGACAA
AAATTCTCGCCATATTTGATTTAATTTTCATCGTGAAAGATATAAGGATGTACAGTCAAGATAAGGACGTATTATTATTAATTACTCCCTTTGTAATTAGAATAACGAGT
GATTATAGCAAGCCACATTTGCTAATGCAACCTTGGGTGAAAGTAGAGCTTTTAAAGAAGAGAATTGGCTCAACAGGTGTTAGAAAATTTTGGGTTAGCCATATGTATGT
TGTTATGCTGTCGAAATTTTTGGAGTATCCGATTAGAATTAGGATAAAGGCTTTAGTAATGTCACTAGAAGGTAAAACACAAGTGGAGCCTTGGAGCACAAGAGGAGGCT
TGGAGTTCGATTTAACTTGGGATAAATCGGTGAAGCATGTACGATGTGATGAGGATTACTACAAATCGGGTGATGCTGAGGAGGAGGTCTGA
Protein sequenceShow/hide protein sequence
MLSCQHYMALHVLVVINTLVSVNFDRSESEYFVQKEKWLGGVLLVVSSRLVFLLAQSGSFLFGLLELLERLASFVVCARLGPGIPGLQLGFGFGAGCGVGLGFGYGVGRG
IAQDDKRRYSNVGDLLHGHQSIFPQRFQESTFTWRGSFSVELLKKLKAHFWPTGLKKVCLWNRLRQDNIDLQTKILAIFDLIFIVKDIRMYSQDKDVLLLITPFVIRITS
DYSKPHLLMQPWVKVELLKKRIGSTGVRKFWVSHMYVVMLSKFLEYPIRIRIKALVMSLEGKTQVEPWSTRGGLEFDLTWDKSVKHVRCDEDYYKSGDAEEEV