; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg005447 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg005447
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionHTH myb-type domain-containing protein
Genome locationscaffold7:26533728..26535867
RNA-Seq ExpressionSpg005447
SyntenySpg005447
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR006447 - Myb domain, plants
IPR044848 - PHR1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601716.1 putative Myb family transcription factor, partial [Cucurbita argyrosperma subsp. sororia]2.7e-1244.14Show/hide
Query:  ATPKLVLQLMDVKGLSISHVKSHLQMYRSMRGDFIGRHAERSRKPSFEEENLKVLHSSMRLSKESKSEGVGSTQRSRRRSCWKREEKMEERRQGIIYETE
        ATPKL+L+LMDVKG+SISHVKSHLQMYRSMRG+ + RH E                           +G G     R+RS   +E   +       Y+  
Subjt:  ATPKLVLQLMDVKGLSISHVKSHLQMYRSMRGDFIGRHAERSRKPSFEEENLKVLHSSMRLSKESKSEGVGSTQRSRRRSCWKREEKMEERRQGIIYETE

Query:  RVSLSDPYAYDYDVKANAMPNDHIHTTNMDHPASASPFSLSLSQV
              PYAY Y+V+ N MPN HI TTNM H  + SPFSL LSQ+
Subjt:  RVSLSDPYAYDYDVKANAMPNDHIHTTNMDHPASASPFSLSLSQV

KAG7032464.1 putative Myb family transcription factor [Cucurbita argyrosperma subsp. argyrosperma]2.7e-1244.14Show/hide
Query:  ATPKLVLQLMDVKGLSISHVKSHLQMYRSMRGDFIGRHAERSRKPSFEEENLKVLHSSMRLSKESKSEGVGSTQRSRRRSCWKREEKMEERRQGIIYETE
        ATPKL+L+LMDVKG+SISHVKSHLQMYRSMRG+ + RH E                           +G G     R+RS   +E   +       Y+  
Subjt:  ATPKLVLQLMDVKGLSISHVKSHLQMYRSMRGDFIGRHAERSRKPSFEEENLKVLHSSMRLSKESKSEGVGSTQRSRRRSCWKREEKMEERRQGIIYETE

Query:  RVSLSDPYAYDYDVKANAMPNDHIHTTNMDHPASASPFSLSLSQV
              PYAY Y+V+ N MPN HI TTNM H  + SPFSL LSQ+
Subjt:  RVSLSDPYAYDYDVKANAMPNDHIHTTNMDHPASASPFSLSLSQV

XP_022929947.1 myb family transcription factor PHL6-like [Cucurbita moschata]1.6e-1244.14Show/hide
Query:  ATPKLVLQLMDVKGLSISHVKSHLQMYRSMRGDFIGRHAERSRKPSFEEENLKVLHSSMRLSKESKSEGVGSTQRSRRRSCWKREEKMEERRQGIIYETE
        ATPKL+LQLMDVKG+S+SHVKSHLQMYRSMRG+ + RH E                           +G G     R+RS   +E   +       Y+  
Subjt:  ATPKLVLQLMDVKGLSISHVKSHLQMYRSMRGDFIGRHAERSRKPSFEEENLKVLHSSMRLSKESKSEGVGSTQRSRRRSCWKREEKMEERRQGIIYETE

Query:  RVSLSDPYAYDYDVKANAMPNDHIHTTNMDHPASASPFSLSLSQV
              PYAY Y+V+ N MPN HI TTNM H  + SPFSL LSQ+
Subjt:  RVSLSDPYAYDYDVKANAMPNDHIHTTNMDHPASASPFSLSLSQV

XP_023516803.1 putative Myb family transcription factor At1g14600 [Cucurbita pepo subsp. pepo]7.0e-1345.52Show/hide
Query:  ATPKLVLQLMDVKGLSISHVKSHLQMYRSMRGDFIGRHAERSRKPSFEEENLKVLHSSMRLSKESKSEGVGSTQRSRRRSCWKREEKMEERRQGIIYETE
        ATPKL+LQLMDVKG+SISHVKSHLQMYRSMRG+ + RH E                           +G G     R+RS   +E   +       Y+  
Subjt:  ATPKLVLQLMDVKGLSISHVKSHLQMYRSMRGDFIGRHAERSRKPSFEEENLKVLHSSMRLSKESKSEGVGSTQRSRRRSCWKREEKMEERRQGIIYETE

Query:  RVSLSDPYAYDYDVKANAMPNDHIHTTNMDHPASASPFSLSLSQV
              PYAY Y+V  + MPN HI TTNM H AS+SPFSL LSQ+
Subjt:  RVSLSDPYAYDYDVKANAMPNDHIHTTNMDHPASASPFSLSLSQV

XP_034198702.1 putative Myb family transcription factor At1g14600 isoform X2 [Prunus dulcis]5.9e-1240.35Show/hide
Query:  ATPKLVLQLMDVKGLSISHVKSHLQMYRSMRGDFIGRHAERS----RKPSFEEE--------NLKVLHSSMRLSKESKSEGVGSTQRSRRRSCWKREEKM
        ATPKLVLQLMDVKGL+ISHVKSHLQMYRSMRGD   R  +RS    RK  FEE         N    + S +  +ES S+ + ST R  +R+  +    +
Subjt:  ATPKLVLQLMDVKGLSISHVKSHLQMYRSMRGDFIGRHAERS----RKPSFEEE--------NLKVLHSSMRLSKESKSEGVGSTQRSRRRSCWKREEKM

Query:  EERRQGIIYETERVSLSDPYAYDYDVKANA----------------MPNDHIHTTNMDHPASASPFSLSLS
         E  Q    +    ++S+PY++D +V A A                +P  H+H  N +HP  +S FSL  S
Subjt:  EERRQGIIYETERVSLSDPYAYDYDVKANA----------------MPNDHIHTTNMDHPASASPFSLSLS

TrEMBL top hitse value%identityAlignment
A0A251R793 HTH myb-type domain-containing protein2.9e-1240.35Show/hide
Query:  ATPKLVLQLMDVKGLSISHVKSHLQMYRSMRGDFIGRHAERS----RKPSFEEE--------NLKVLHSSMRLSKESKSEGVGSTQRSRRRSCWKREEKM
        ATPKLVLQLMDVKGL+ISHVKSHLQMYRSMRGD   R  +RS    RK  FEE         N    + S +  +ES S+ + ST R  +R+  +    +
Subjt:  ATPKLVLQLMDVKGLSISHVKSHLQMYRSMRGDFIGRHAERS----RKPSFEEE--------NLKVLHSSMRLSKESKSEGVGSTQRSRRRSCWKREEKM

Query:  EERRQGIIYETERVSLSDPYAYDYDVKANA----------------MPNDHIHTTNMDHPASASPFSLSLS
         E  Q    +    ++S+PY++D +V A A                +P  H+H  N +HP  +S FSL  S
Subjt:  EERRQGIIYETERVSLSDPYAYDYDVKANA----------------MPNDHIHTTNMDHPASASPFSLSLS

A0A4Y1QS29 Homeodomain-like superfamily protein2.9e-1240.35Show/hide
Query:  ATPKLVLQLMDVKGLSISHVKSHLQMYRSMRGDFIGRHAERS----RKPSFEEE--------NLKVLHSSMRLSKESKSEGVGSTQRSRRRSCWKREEKM
        ATPKLVLQLMDVKGL+ISHVKSHLQMYRSMRGD   R  +RS    RK  FEE         N    + S +  +ES S+ + ST R  +R+  +    +
Subjt:  ATPKLVLQLMDVKGLSISHVKSHLQMYRSMRGDFIGRHAERS----RKPSFEEE--------NLKVLHSSMRLSKESKSEGVGSTQRSRRRSCWKREEKM

Query:  EERRQGIIYETERVSLSDPYAYDYDVKANA----------------MPNDHIHTTNMDHPASASPFSLSLS
         E  Q    +    ++S+PY++D +V A A                +P  H+H  N +HP  +S FSL  S
Subjt:  EERRQGIIYETERVSLSDPYAYDYDVKANA----------------MPNDHIHTTNMDHPASASPFSLSLS

A0A6J1EP17 myb family transcription factor PHL6-like7.6e-1344.14Show/hide
Query:  ATPKLVLQLMDVKGLSISHVKSHLQMYRSMRGDFIGRHAERSRKPSFEEENLKVLHSSMRLSKESKSEGVGSTQRSRRRSCWKREEKMEERRQGIIYETE
        ATPKL+LQLMDVKG+S+SHVKSHLQMYRSMRG+ + RH E                           +G G     R+RS   +E   +       Y+  
Subjt:  ATPKLVLQLMDVKGLSISHVKSHLQMYRSMRGDFIGRHAERSRKPSFEEENLKVLHSSMRLSKESKSEGVGSTQRSRRRSCWKREEKMEERRQGIIYETE

Query:  RVSLSDPYAYDYDVKANAMPNDHIHTTNMDHPASASPFSLSLSQV
              PYAY Y+V+ N MPN HI TTNM H  + SPFSL LSQ+
Subjt:  RVSLSDPYAYDYDVKANAMPNDHIHTTNMDHPASASPFSLSLSQV

A0A6J1JLZ1 putative Myb family transcription factor At1g146003.8e-1245.52Show/hide
Query:  ATPKLVLQLMDVKGLSISHVKSHLQMYRSMRGDFIGRHAERSRKPSFEEENLKVLHSSMRLSKESKSEGVGSTQRSRRRSCWKREEKMEERRQGIIYETE
        ATPKL+LQLMDVKG+SISHVKSHLQMYRSMRG+ + RHAE                      K    EG+      R+RS   +E   +       Y+  
Subjt:  ATPKLVLQLMDVKGLSISHVKSHLQMYRSMRGDFIGRHAERSRKPSFEEENLKVLHSSMRLSKESKSEGVGSTQRSRRRSCWKREEKMEERRQGIIYETE

Query:  RVSLSDPYAYDYDVKANAMPNDHIHTTNMDHPASASPFSLSLSQV
              PYAY Y+V  + MPN HI TTNM H  + SPFSL LSQ+
Subjt:  RVSLSDPYAYDYDVKANAMPNDHIHTTNMDHPASASPFSLSLSQV

A0A6P5T2B3 putative Myb family transcription factor At1g14600 isoform X28.4e-1240.35Show/hide
Query:  ATPKLVLQLMDVKGLSISHVKSHLQMYRSMRGDFIGRHAERS----RKPSFEEE--------NLKVLHSSMRLSKESKSEGVGSTQRSRRRSCWKREEKM
        ATPKLVLQLMDVKGL+ISHVKSHLQMYRSMR D   R  +RS    RK SFEE         N    + S +  +ES S+ + ST R  +R+  +    +
Subjt:  ATPKLVLQLMDVKGLSISHVKSHLQMYRSMRGDFIGRHAERS----RKPSFEEE--------NLKVLHSSMRLSKESKSEGVGSTQRSRRRSCWKREEKM

Query:  EERRQGIIYETERVSLSDPYAYDYDVKANA----------------MPNDHIHTTNMDHPASASPFSLSLS
         E  Q    +    ++S+PY+ D +V A A                +P  H+H  N++HP   S FSL  S
Subjt:  EERRQGIIYETERVSLSDPYAYDYDVKANA----------------MPNDHIHTTNMDHPASASPFSLSLS

SwissProt top hitse value%identityAlignment
A0A0P0X0C0 Myb family transcription factor MPH16.6e-0682.76Show/hide
Query:  ATPKLVLQLMDVKGLSISHVKSHLQMYRS
        ATPK +LQLM VKG+SISH+KSHLQMYRS
Subjt:  ATPKLVLQLMDVKGLSISHVKSHLQMYRS

A3AWH5 Myb family transcription factor MOF11.7e-0667.44Show/hide
Query:  ATPKLVLQLMDVKGLSISHVKSHLQMYRSMRGDFIGRHAERSR
        ATPKL+LQLM VKGL+ISHVKSHLQMYR  R   +G H    R
Subjt:  ATPKLVLQLMDVKGLSISHVKSHLQMYRSMRGDFIGRHAERSR

Q700D9 Putative Myb family transcription factor At1g146005.4e-0855.93Show/hide
Query:  ATPKLVLQLMDVKGLSISHVKSHLQMYRSMRGDFIGRHAE-------RSRKPSFEEENL
        ATPKLVL++MDVKGL+ISHVKSHLQMYR  R   +G+  E       R R+   EE++L
Subjt:  ATPKLVLQLMDVKGLSISHVKSHLQMYRSMRGDFIGRHAE-------RSRKPSFEEENL

Q93WJ9 Transcription repressor KAN13.3e-0570.97Show/hide
Query:  ATPKLVLQLMDVKGLSISHVKSHLQMYRSMR
        ATPK VL+LMDVK L+++HVKSHLQMYR+++
Subjt:  ATPKLVLQLMDVKGLSISHVKSHLQMYRSMR

Q9C616 Probable transcription factor KAN23.3e-0570.97Show/hide
Query:  ATPKLVLQLMDVKGLSISHVKSHLQMYRSMR
        ATPK VL+LMDVK L+++HVKSHLQMYR+++
Subjt:  ATPKLVLQLMDVKGLSISHVKSHLQMYRSMR

Arabidopsis top hitse value%identityAlignment
AT1G14600.1 Homeodomain-like superfamily protein3.8e-0955.93Show/hide
Query:  ATPKLVLQLMDVKGLSISHVKSHLQMYRSMRGDFIGRHAE-------RSRKPSFEEENL
        ATPKLVL++MDVKGL+ISHVKSHLQMYR  R   +G+  E       R R+   EE++L
Subjt:  ATPKLVLQLMDVKGLSISHVKSHLQMYRSMRGDFIGRHAE-------RSRKPSFEEENL

AT2G02060.1 Homeodomain-like superfamily protein1.2e-0789.29Show/hide
Query:  ATPKLVLQLMDVKGLSISHVKSHLQMYR
        ATPKLVL++MDVKGL+ISHVKSHLQMYR
Subjt:  ATPKLVLQLMDVKGLSISHVKSHLQMYR

AT2G38300.1 myb-like HTH transcriptional regulator family protein1.2e-0770.27Show/hide
Query:  ATPKLVLQLMDVKGLSISHVKSHLQMYRSMRGDFIGR
        ATPKLV Q+M++KGLSI+HVKSHLQMYRS + D  G+
Subjt:  ATPKLVLQLMDVKGLSISHVKSHLQMYRSMRGDFIGR

AT2G40260.1 Homeodomain-like superfamily protein3.6e-0738.46Show/hide
Query:  ATPKLVLQLMDVKGLSISHVKSHLQMYRSMRGD-----FIGRHAERSRKPSFEEENLKVLHSSMRLSKESKSEGVGSTQRSRR---RSCWKREEKMEERR
        ATPKLVLQLM+VKGLSI+HVKSHLQMYRS + D       G   E     ++    L +L S  +    S   G GS    RR   RS W+     E  R
Subjt:  ATPKLVLQLMDVKGLSISHVKSHLQMYRSMRGD-----FIGRHAERSRKPSFEEENLKVLHSSMRLSKESKSEGVGSTQRSRR---RSCWKREEKMEERR

Query:  QGIIYETERVSLSDPYAYDYDVKANAMPND
              T +   S      Y   +N++ ND
Subjt:  QGIIYETERVSLSDPYAYDYDVKANAMPND

AT2G42660.1 Homeodomain-like superfamily protein2.8e-0759.57Show/hide
Query:  ATPKLVLQLMDVKGLSISHVKSHLQMYRSMRGDFIGRHAERSRKPSF
        ATPKLVL++M++KGLSI+HVKSHLQMYRS       +  E S +P F
Subjt:  ATPKLVLQLMDVKGLSISHVKSHLQMYRSMRGDFIGRHAERSRKPSF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCAACTCCCAAGCTTGTGCTTCAGTTGATGGATGTGAAAGGCCTCTCTATATCACACGTTAAGAGCCATCTTCAGATGTATAGGAGTATGAGAGGTGACTTTATTGGAAG
ACATGCTGAAAGAAGTAGAAAACCAAGTTTTGAAGAAGAAAATCTGAAAGTCTTACATTCATCAATGAGACTTTCTAAGGAATCAAAATCAGAGGGCGTTGGCAGCACTC
AACGCTCCAGAAGAAGGAGTTGTTGGAAGAGAGAGGAGAAAATGGAGGAGCGCAGGCAAGGAATAATATATGAGACTGAGAGAGTATCGCTATCAGATCCTTATGCTTAT
GATTATGATGTGAAGGCCAATGCCATGCCCAACGACCATATTCATACTACAAACATGGATCATCCTGCCTCTGCCTCACCTTTCTCTCTCTCACTTTCACAGGTCTGA
mRNA sequenceShow/hide mRNA sequence
GCAACTCCCAAGCTTGTGCTTCAGTTGATGGATGTGAAAGGCCTCTCTATATCACACGTTAAGAGCCATCTTCAGATGTATAGGAGTATGAGAGGTGACTTTATTGGAAG
ACATGCTGAAAGAAGTAGAAAACCAAGTTTTGAAGAAGAAAATCTGAAAGTCTTACATTCATCAATGAGACTTTCTAAGGAATCAAAATCAGAGGGCGTTGGCAGCACTC
AACGCTCCAGAAGAAGGAGTTGTTGGAAGAGAGAGGAGAAAATGGAGGAGCGCAGGCAAGGAATAATATATGAGACTGAGAGAGTATCGCTATCAGATCCTTATGCTTAT
GATTATGATGTGAAGGCCAATGCCATGCCCAACGACCATATTCATACTACAAACATGGATCATCCTGCCTCTGCCTCACCTTTCTCTCTCTCACTTTCACAGGTCTGA
Protein sequenceShow/hide protein sequence
ATPKLVLQLMDVKGLSISHVKSHLQMYRSMRGDFIGRHAERSRKPSFEEENLKVLHSSMRLSKESKSEGVGSTQRSRRRSCWKREEKMEERRQGIIYETERVSLSDPYAY
DYDVKANAMPNDHIHTTNMDHPASASPFSLSLSQV