CuGenDBv2

Gene ID	Spg005460
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	DUF4283 domain-containing protein
Genome location	scaffold7:27740936..27742035
RNA-Seq Expression	Spg005460
Synteny	Spg005460
Gene Ontology terms	NA
InterPro domains	IPR025558 - Domain of unknown function DUF4283 IPR040256 - Uncharacterized protein At4g02000-like

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0046247.1 uncharacterized protein E6C27_scaffold284G00450 [Cucumis melo var. makuwa]

1.0e-32

43.93

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Query:  MPFTVISRIVNCLWGHIEEPTVTILDNGLIIFQLMSHESRNW--------------------------------GPIWVKLHNVPLELWTPRGLRAVASA
        +P+TVI  +V  +WG IE P +TIL+N LI FQ    +S  W                                 P+W++L  +P+ELWT  GL  VASA
Subjt:  MPFTVISRIVNCLWGHIEEPTVTILDNGLIIFQLMSHESRNW--------------------------------GPIWVKLHNVPLELWTPRGLRAVASA

Query:  VGKLVCLDKATEERRRLSFARVYVEIGVEDVLPSFITVRCRGVDFEVPVEYAWRPKWCLTCRVFGHSGSNCPK
        VGK + LD AT+ERRRLS+ARV VE+     +P+ ITV  RGVDF V V Y W+P+ C  C  FGHSGSNC +
Subjt:  VGKLVCLDKATEERRRLSFARVYVEIGVEDVLPSFITVRCRGVDFEVPVEYAWRPKWCLTCRVFGHSGSNCPK

TYK18951.1 uncharacterized protein E5676_scaffold418G00380 [Cucumis melo var. makuwa]

1.0e-32

43.93

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Query:  MPFTVISRIVNCLWGHIEEPTVTILDNGLIIFQLMSHESRNW--------------------------------GPIWVKLHNVPLELWTPRGLRAVASA
        +P+TVI  +V  +WG IE P +TIL+N LI FQ    +S  W                                 P+W++L  +P+ELWT  GL  VASA
Subjt:  MPFTVISRIVNCLWGHIEEPTVTILDNGLIIFQLMSHESRNW--------------------------------GPIWVKLHNVPLELWTPRGLRAVASA

Query:  VGKLVCLDKATEERRRLSFARVYVEIGVEDVLPSFITVRCRGVDFEVPVEYAWRPKWCLTCRVFGHSGSNCPK
        VGK + LD AT+ERRRLS+ARV VE+     +P+ ITV  RGVDF V V Y W+P+ C  C  FGHSGSNC +
Subjt:  VGKLVCLDKATEERRRLSFARVYVEIGVEDVLPSFITVRCRGVDFEVPVEYAWRPKWCLTCRVFGHSGSNCPK

XP_008460524.1 PREDICTED: uncharacterized protein LOC103499323 [Cucumis melo]

5.1e-29

41.62

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Query:  MPFTVISRIVNCLWGHIEEPTVTILDNGLIIFQLMSHESRNW--------------------------------GPIWVKLHNVPLELWTPRGLRAVASA
        +P++VI R+V  + G IE P +TIL+N LI FQ    +S  W                                 P+W+ L  +P+ELWT  GL  VA A
Subjt:  MPFTVISRIVNCLWGHIEEPTVTILDNGLIIFQLMSHESRNW--------------------------------GPIWVKLHNVPLELWTPRGLRAVASA

Query:  VGKLVCLDKATEERRRLSFARVYVEIGVEDVLPSFITVRCRGVDFEVPVEYAWRPKWCLTCRVFGHSGSNCPK
        VGK + LD AT+ERRRLS+ARV VE+     +PS ITV  RGV+F V V+Y W+P+ C  C  FGHS S C +
Subjt:  VGKLVCLDKATEERRRLSFARVYVEIGVEDVLPSFITVRCRGVDFEVPVEYAWRPKWCLTCRVFGHSGSNCPK

XP_008463187.1 PREDICTED: uncharacterized protein LOC103501395 [Cucumis melo]

1.0e-32

43.93

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Query:  MPFTVISRIVNCLWGHIEEPTVTILDNGLIIFQLMSHESRNW--------------------------------GPIWVKLHNVPLELWTPRGLRAVASA
        +P+TVI  +V  +WG IE P +TIL+N LI FQ    +S  W                                 P+W++L  +P+ELWT  GL  VASA
Subjt:  MPFTVISRIVNCLWGHIEEPTVTILDNGLIIFQLMSHESRNW--------------------------------GPIWVKLHNVPLELWTPRGLRAVASA

Query:  VGKLVCLDKATEERRRLSFARVYVEIGVEDVLPSFITVRCRGVDFEVPVEYAWRPKWCLTCRVFGHSGSNCPK
        VGK + LD AT+ERRRLS+ARV VE+     +P+ ITV  RGVDF V V Y W+P+ C  C  FGHSGSNC +
Subjt:  VGKLVCLDKATEERRRLSFARVYVEIGVEDVLPSFITVRCRGVDFEVPVEYAWRPKWCLTCRVFGHSGSNCPK

XP_031745056.1 uncharacterized protein LOC116405235 [Cucumis sativus]

1.5e-33

41.14

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Query:  MPFTVISRIVNCLWGHIEEPTVTILDNGLIIFQLMSHESRNW--------------------------------GPIWVKLHNVPLELWTPRGLRAVASA
        +P+ VI R++  +WG IE PT+T+++NGLI FQ    +S  W                                 P+W+KL  +PLELWT  GL  VASA
Subjt:  MPFTVISRIVNCLWGHIEEPTVTILDNGLIIFQLMSHESRNW--------------------------------GPIWVKLHNVPLELWTPRGLRAVASA

Query:  VGKLVCLDKATEERRRLSFARVYVEIGVEDVLPSFITVRCRGVDFEVPVEYAWRPKWCLTCRVFGHSGSNCPKER
        +GK + +D AT+ERR LS+AR+ VE+ V+ ++P+ +TV  +G +F V V Y W+PK C  CR FGHS + CPK+R
Subjt:  VGKLVCLDKATEERRRLSFARVYVEIGVEDVLPSFITVRCRGVDFEVPVEYAWRPKWCLTCRVFGHSGSNCPKER

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CC83 uncharacterized protein LOC103499323

2.5e-29

41.62

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Query:  MPFTVISRIVNCLWGHIEEPTVTILDNGLIIFQLMSHESRNW--------------------------------GPIWVKLHNVPLELWTPRGLRAVASA
        +P++VI R+V  + G IE P +TIL+N LI FQ    +S  W                                 P+W+ L  +P+ELWT  GL  VA A
Subjt:  MPFTVISRIVNCLWGHIEEPTVTILDNGLIIFQLMSHESRNW--------------------------------GPIWVKLHNVPLELWTPRGLRAVASA

Query:  VGKLVCLDKATEERRRLSFARVYVEIGVEDVLPSFITVRCRGVDFEVPVEYAWRPKWCLTCRVFGHSGSNCPK
        VGK + LD AT+ERRRLS+ARV VE+     +PS ITV  RGV+F V V+Y W+P+ C  C  FGHS S C +
Subjt:  VGKLVCLDKATEERRRLSFARVYVEIGVEDVLPSFITVRCRGVDFEVPVEYAWRPKWCLTCRVFGHSGSNCPK

A0A1S3CJ11 uncharacterized protein LOC103501395

4.8e-33

43.93

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Query:  MPFTVISRIVNCLWGHIEEPTVTILDNGLIIFQLMSHESRNW--------------------------------GPIWVKLHNVPLELWTPRGLRAVASA
        +P+TVI  +V  +WG IE P +TIL+N LI FQ    +S  W                                 P+W++L  +P+ELWT  GL  VASA
Subjt:  MPFTVISRIVNCLWGHIEEPTVTILDNGLIIFQLMSHESRNW--------------------------------GPIWVKLHNVPLELWTPRGLRAVASA

Query:  VGKLVCLDKATEERRRLSFARVYVEIGVEDVLPSFITVRCRGVDFEVPVEYAWRPKWCLTCRVFGHSGSNCPK
        VGK + LD AT+ERRRLS+ARV VE+     +P+ ITV  RGVDF V V Y W+P+ C  C  FGHSGSNC +
Subjt:  VGKLVCLDKATEERRRLSFARVYVEIGVEDVLPSFITVRCRGVDFEVPVEYAWRPKWCLTCRVFGHSGSNCPK

A0A5A7TWG5 Reverse transcriptase domain-containing protein

4.8e-33

43.93

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Query:  MPFTVISRIVNCLWGHIEEPTVTILDNGLIIFQLMSHESRNW--------------------------------GPIWVKLHNVPLELWTPRGLRAVASA
        +P+TVI  +V  +WG IE P +TIL+N LI FQ    +S  W                                 P+W++L  +P+ELWT  GL  VASA
Subjt:  MPFTVISRIVNCLWGHIEEPTVTILDNGLIIFQLMSHESRNW--------------------------------GPIWVKLHNVPLELWTPRGLRAVASA

Query:  VGKLVCLDKATEERRRLSFARVYVEIGVEDVLPSFITVRCRGVDFEVPVEYAWRPKWCLTCRVFGHSGSNCPK
        VGK + LD AT+ERRRLS+ARV VE+     +P+ ITV  RGVDF V V Y W+P+ C  C  FGHSGSNC +
Subjt:  VGKLVCLDKATEERRRLSFARVYVEIGVEDVLPSFITVRCRGVDFEVPVEYAWRPKWCLTCRVFGHSGSNCPK

A0A5A7V507 DUF4283 domain-containing protein

2.5e-29

41.62

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Query:  MPFTVISRIVNCLWGHIEEPTVTILDNGLIIFQLMSHESRNW--------------------------------GPIWVKLHNVPLELWTPRGLRAVASA
        +P++VI R+V  + G IE P +TIL+N LI FQ    +S  W                                 P+W+ L  +P+ELWT  GL  VA A
Subjt:  MPFTVISRIVNCLWGHIEEPTVTILDNGLIIFQLMSHESRNW--------------------------------GPIWVKLHNVPLELWTPRGLRAVASA

Query:  VGKLVCLDKATEERRRLSFARVYVEIGVEDVLPSFITVRCRGVDFEVPVEYAWRPKWCLTCRVFGHSGSNCPK
        VGK + LD AT+ERRRLS+ARV VE+     +PS ITV  RGV+F V V+Y W+P+ C  C  FGHS S C +
Subjt:  VGKLVCLDKATEERRRLSFARVYVEIGVEDVLPSFITVRCRGVDFEVPVEYAWRPKWCLTCRVFGHSGSNCPK

A0A5D3D5X6 Reverse transcriptase domain-containing protein

4.8e-33

43.93

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Query:  MPFTVISRIVNCLWGHIEEPTVTILDNGLIIFQLMSHESRNW--------------------------------GPIWVKLHNVPLELWTPRGLRAVASA
        +P+TVI  +V  +WG IE P +TIL+N LI FQ    +S  W                                 P+W++L  +P+ELWT  GL  VASA
Subjt:  MPFTVISRIVNCLWGHIEEPTVTILDNGLIIFQLMSHESRNW--------------------------------GPIWVKLHNVPLELWTPRGLRAVASA

Query:  VGKLVCLDKATEERRRLSFARVYVEIGVEDVLPSFITVRCRGVDFEVPVEYAWRPKWCLTCRVFGHSGSNCPK
        VGK + LD AT+ERRRLS+ARV VE+     +P+ ITV  RGVDF V V Y W+P+ C  C  FGHSGSNC +
Subjt:  VGKLVCLDKATEERRRLSFARVYVEIGVEDVLPSFITVRCRGVDFEVPVEYAWRPKWCLTCRVFGHSGSNCPK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G07760.1 Zinc knuckle (CCHC-type) family protein

7.4e-10

33.64

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Query:  PIWVKLHNVPLELWTPRGLRAVASAVGKLVCLDKATEERRRLSFARVYVEIGVEDVLPSFI-TVRCRGVDFEVPVEYAWRPKWCLTCRVFGHSGSNCPKE
        P+WV L N+P  L++  G+  +AS +G  +   K   +   +S A + VE+ +    P  I  V  +G    V VEYAW P  C  C   GH  S C K 
Subjt:  PIWVKLHNVPLELWTPRGLRAVASAVGKLVCLDKATEERRRLSFARVYVEIGVEDVLPSFI-TVRCRGVDFEVPVEYAWRPKWCLTCRVFGHSGSNCPKE

Query:  RPVQVRAHDK
              AH+K
Subjt:  RPVQVRAHDK

AT5G28823.1 FUNCTIONS IN: molecular_function unknown

3.4e-07

24.32

Show/hide

Query:  PIWVKLHNVPLELWTPRGLRAVASAVGKLVCLDKATEERRRLSFARVYVEIGVEDVLPSFITVR--CRGVDFEVPVEYAWRPKWCLTCRVFGHSGSNCPK
        P W+ L N+P +L++ +G++ +AS +G+ +   +   +  ++  A++ VE+ ++   P  + ++  C  +   V V Y+W P  CL   V     +  P 
Subjt:  PIWVKLHNVPLELWTPRGLRAVASAVGKLVCLDKATEERRRLSFARVYVEIGVEDVLPSFITVR--CRGVDFEVPVEYAWRPKWCLTCRVFGHSGSNCPK

Query:  ERPVQVRAHDK
             V A  K
Subjt:  ERPVQVRAHDK

Sequences

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CDS sequence

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ATGCCTTTCACGGTTATCTCTCGGATCGTGAATTGTTTATGGGGTCATATTGAGGAGCCTACAGTGACAATTTTGGATAATGGCCTTATTATTTTCCAATTGATGAGTCA
TGAGTCTCGTAACTGGGGTCCTATATGGGTCAAATTGCATAATGTGCCATTAGAGTTGTGGACCCCAAGGGGGTTGCGTGCTGTGGCTAGTGCCGTAGGGAAGCTAGTTT
GCCTAGATAAGGCAACTGAGGAGCGTCGTCGATTGTCCTTTGCTCGGGTCTACGTTGAGATTGGGGTTGAGGATGTGTTGCCTTCGTTTATTACAGTGCGTTGTCGAGGA
GTGGATTTTGAGGTCCCGGTGGAATATGCTTGGAGGCCAAAGTGGTGTTTGACTTGTAGGGTGTTTGGCCACTCAGGGTCAAACTGTCCCAAGGAGCGGCCGGTCCAAGT
AAGGGCTCATGACAAGCGATCTCCACAGAAGGCTCCTCTGAAGTTTCCCCCTAGGGGGTCGGGGTTATTGCCAGTTAACCCCTTTGCGGCTCTAGGAGGTGATGACGAGT
CTAAGGCACTTGTGTTGATACAAGAGGATGTGGATCCTCCCCCATTAGCTTTGGGCACTCCCCAGTCGTCTGGTACCTGTGTTTTGCTTCCCTACTCGGGGTGTGAGCTG
TGCTTAATTTGTGCCCTGGCCTCAGGCTATGAGGTCCACCTTTTTGCATAG

mRNA sequence

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Protein sequence

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MPFTVISRIVNCLWGHIEEPTVTILDNGLIIFQLMSHESRNWGPIWVKLHNVPLELWTPRGLRAVASAVGKLVCLDKATEERRRLSFARVYVEIGVEDVLPSFITVRCRG
VDFEVPVEYAWRPKWCLTCRVFGHSGSNCPKERPVQVRAHDKRSPQKAPLKFPPRGSGLLPVNPFAALGGDDESKALVLIQEDVDPPPLALGTPQSSGTCVLLPYSGCEL
CLICALASGYEVHLFA

Spg005460 (gene) of Sponge gourd (cylindrica) v1 genome