; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg005475 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg005475
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionPMD domain-containing protein
Genome locationscaffold7:25963712..25965886
RNA-Seq ExpressionSpg005475
SyntenySpg005475
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048242.1 hypothetical protein E6C27_scaffold63G001580 [Cucumis melo var. makuwa]3.4e-0526.84Show/hide
Query:  VDSTIPSRTQLKLPKKGDSKFEGKELRLLK-VARSPDDSTEE---ESQNSTGDRHWKRTKRPRKAS--DPDDKSLKSASNASQAPDDIETLLPLNDCVQE
        + S IP  +Q KLPK   +   GKE+R ++ +A + ++  +E   ES +S  D HWKR  +  K S  DPD KS    S+A   P D+ +L PLND ++ 
Subjt:  VDSTIPSRTQLKLPKKGDSKFEGKELRLLK-VARSPDDSTEE---ESQNSTGDRHWKRTKRPRKAS--DPDDKSLKSASNASQAPDDIETLLPLNDCVQE

Query:  EEECSSEQSLTSPDAFASSVKNFGSSYASSSKQVVNSSSRST---------------------------EKVPQH---TQKVVAPVF--------EASQF
          E  S +SL  P    S+++  G+S    SK V  S   S                             K P       K++   F        E   F
Subjt:  EEECSSEQSLTSPDAFASSVKNFGSSYASSSKQVVNSSSRST---------------------------EKVPQH---TQKVVAPVF--------EASQF

Query:  CADDTKV----------------------------AELEAKLTSAEAKVESLSNSVSEKEKDLAHEKLVVSKIREEISDIECAPTISASDVCTLATLHGL
         ++  K+                             ELE +L S  A+ E LS    EK   +  ++L V K++ E++ +E  PTI+   +  LAT+   
Subjt:  CADDTKV----------------------------AELEAKLTSAEAKVESLSNSVSEKEKDLAHEKLVVSKIREEISDIECAPTISASDVCTLATLHGL

Query:  LESTRDELKALQW
        +E  ++E K  +W
Subjt:  LESTRDELKALQW

KAA0052363.1 hypothetical protein E6C27_scaffold207G002060 [Cucumis melo var. makuwa]5.8e-0537.96Show/hide
Query:  LVDSTIPSRTQLKLPKKGDSKFEGKELRLLKVARSP---DDSTEEESQNSTGDRHWKRTKRPRKAS--DPDDKSLKSASNASQAPDDIETLLPLNDCVQE
        LV S IP  +Q +LPK   S   GKE+RL++ A +P   D+  E ES ++  DRHWKR  +  K S   PD + L    +A + P D+  L PLND ++ 
Subjt:  LVDSTIPSRTQLKLPKKGDSKFEGKELRLLKVARSP---DDSTEEESQNSTGDRHWKRTKRPRKAS--DPDDKSLKSASNASQAPDDIETLLPLNDCVQE

Query:  EEECSSEQSLTSPDAFASSVKNFGSSYASSSKQVVNS
          E  S++SLT P A  S+ +  G+S    +K    S
Subjt:  EEECSSEQSLTSPDAFASSVKNFGSSYASSSKQVVNS

KAA0052877.1 hypothetical protein E6C27_scaffold1184G00090 [Cucumis melo var. makuwa]4.0e-0630.16Show/hide
Query:  LVDSTIPSRTQLKLPKKGDSKFEGKELRLLK-VARSPDDSTEE---ESQNSTGDRHWKRTKRPRKASDPDDKSLKSASNASQAPDDIETLLPLNDCVQEE
        LV S IP  +Q KLPK   S   GKE+RL++ VA + ++  +E   +S  S  DRHWKR  +  K SD D   L    +++    D+  L PLN   +  
Subjt:  LVDSTIPSRTQLKLPKKGDSKFEGKELRLLK-VARSPDDSTEE---ESQNSTGDRHWKRTKRPRKASDPDDKSLKSASNASQAPDDIETLLPLNDCVQEE

Query:  EECSSEQSLTSPDAFASSVKNFGSSYASSSKQVVNSSSRSTEKVPQHTQKV-VAPVFEASQFCADDT----------------KVAELEAKLTSAEAKVE
         E  S++SL  P A  S+++  G+S   +SK V  S   ST        KV V   +  S+    D                 +  ELE +L S   + E
Subjt:  EECSSEQSLTSPDAFASSVKNFGSSYASSSKQVVNSSSRSTEKVPQHTQKV-VAPVFEASQFCADDT----------------KVAELEAKLTSAEAKVE

Query:  SLSNSVSEKEKDLAHEKLVVSKIREEISDIECAPTISASDVCTLATLHGLLE
         LS    +K + +  ++L V+K ++E++ +E   TI+   +  LA +   +E
Subjt:  SLSNSVSEKEKDLAHEKLVVSKIREEISDIECAPTISASDVCTLATLHGLLE

KAA0057575.1 hypothetical protein E6C27_scaffold497G00470 [Cucumis melo var. makuwa]2.6e-0539.68Show/hide
Query:  LVDSTIPSRTQLKLPKKGDSKFEGKELRLLKVARSP---DDSTEEESQNSTGDRHWKRTKRPRKAS--DPDDKSLKSASNASQAPDDIETLLPLNDCVQE
        LV S IP  +Q +LPK   S   GKE+RL++ A +P   D+  E ES ++  DRHWKR  +  K S   PD + L    +A + P D+  L PLND ++ 
Subjt:  LVDSTIPSRTQLKLPKKGDSKFEGKELRLLKVARSP---DDSTEEESQNSTGDRHWKRTKRPRKAS--DPDDKSLKSASNASQAPDDIETLLPLNDCVQE

Query:  EEECSSEQSLTSPDAFASSVKNFGSS
          E  S++SLT P A  S+ +  G+S
Subjt:  EEECSSEQSLTSPDAFASSVKNFGSS

KAA0057699.1 hypothetical protein E6C27_scaffold126G00510 [Cucumis melo var. makuwa]3.4e-0526.41Show/hide
Query:  LVDSTIPSRTQLKLPKKGDSKFEGKELRLLKVARSPD-----DSTEEESQNSTGDRHWKRTKRPRKAS--DPDDKSLKSASNASQAPDDIETLLPLNDCV
        LV S IP  +Q +LPK   S   GKE+RL++ A +P+     +  ++ES +S  DRHWKR  +  K S  +PD + L     ++    D+  L PLND +
Subjt:  LVDSTIPSRTQLKLPKKGDSKFEGKELRLLKVARSPD-----DSTEEESQNSTGDRHWKRTKRPRKAS--DPDDKSLKSASNASQAPDDIETLLPLNDCV

Query:  QEEEECSSEQSLTSPDAFASSVKNFGSSYASSSKQVVNS-------------------------SSRSTEKVPQHTQKVVA----------PVFEASQFC
        +      S++SL  P A  S+ +  G+S    +K    S                         SS+         QKV +          P+ +A Q  
Subjt:  QEEEECSSEQSLTSPDAFASSVKNFGSSYASSSKQVVNS-------------------------SSRSTEKVPQHTQKVVA----------PVFEASQFC

Query:  ADDTKVAELEAKLTSAEAKVESLSNSVSEKEKDLAHEKLVVSKIREEISDIECAPTISASDVCTLATLHGLLESTRDELKALQW
         ++   A  EA     E + ++       + K +  ++L ++K+++E++ +E  P I+   +  LAT+   +E+TR+E K  +W
Subjt:  ADDTKVAELEAKLTSAEAKVESLSNSVSEKEKDLAHEKLVVSKIREEISDIECAPTISASDVCTLATLHGLLESTRDELKALQW

TrEMBL top hitse value%identityAlignment
A0A5A7TFZ6 Uncharacterized protein1.4e-0435.17Show/hide
Query:  GLPFGSKVNRGISKLVDSTIPSRTQLKLPKKGDSKFEGKELRLLK-VARSPDDSTEE---ESQNSTGDRHWKRTKRPRKASDPDDKSLKSASNASQAPDD
        G+ F  K++     LV S IP  +QLKLPK   S   GKE+ L+K +  + ++   E   ES +S  DRH KR  +  K SD D          S A  D
Subjt:  GLPFGSKVNRGISKLVDSTIPSRTQLKLPKKGDSKFEGKELRLLK-VARSPDDSTEE---ESQNSTGDRHWKRTKRPRKASDPDDKSLKSASNASQAPDD

Query:  IETLLPLNDCVQEEEECSSEQSLTSPDAFASSVKNFGSSYASSSK
        +  L PLN+ +++  E  S++SLT P    S+++  G+S    SK
Subjt:  IETLLPLNDCVQEEEECSSEQSLTSPDAFASSVKNFGSSYASSSK

A0A5A7TX42 Uncharacterized protein1.4e-0437.41Show/hide
Query:  LVDSTIPSRTQLKLPKKGDSKFEGKELRLLKVARSPDDSTE-----EESQNSTGDRHWKRTKRPRKAS--DPDDKSLKSASNASQAPDDIETLLPLNDCV
        LV S IP  +Q +LPK   S   GKE+RL++ A +P+   E     +ES +S  DRHWKR  +  K S   PD + L    +A + P D+  L PLND +
Subjt:  LVDSTIPSRTQLKLPKKGDSKFEGKELRLLKVARSPDDSTE-----EESQNSTGDRHWKRTKRPRKAS--DPDDKSLKSASNASQAPDDIETLLPLNDCV

Query:  QEEEECSSEQSLTSPDAFASSVKNFGSSYASSSKQVVNS
        +   E  S++SLT P A  S+ +  G+S    +K    S
Subjt:  QEEEECSSEQSLTSPDAFASSVKNFGSSYASSSKQVVNS

A0A5A7U8L3 PMD domain-containing protein1.1e-0438.13Show/hide
Query:  LVDSTIPSRTQLKLPKKGDSKFEGKELRLLKVARSPDDSTE-----EESQNSTGDRHWKRTKRPRKAS--DPDDKSLKSASNASQAPDDIETLLPLNDCV
        LV S IPS +Q +LPK   S   GKE+RL++ A +P+   E     +ES NS  DRHWKR  +  K S   P+ + L    +A + P D+  L PLND +
Subjt:  LVDSTIPSRTQLKLPKKGDSKFEGKELRLLKVARSPDDSTE-----EESQNSTGDRHWKRTKRPRKAS--DPDDKSLKSASNASQAPDDIETLLPLNDCV

Query:  QEEEECSSEQSLTSPDAFASSVKNFGSSYASSSKQVVNS
        +   E  S++SLT P A  S+ +  G+S    +K    S
Subjt:  QEEEECSSEQSLTSPDAFASSVKNFGSSYASSSKQVVNS

A0A5A7UVX0 PMD domain-containing protein1.6e-0526.41Show/hide
Query:  LVDSTIPSRTQLKLPKKGDSKFEGKELRLLKVARSPD-----DSTEEESQNSTGDRHWKRTKRPRKAS--DPDDKSLKSASNASQAPDDIETLLPLNDCV
        LV S IP  +Q +LPK   S   GKE+RL++ A +P+     +  ++ES +S  DRHWKR  +  K S  +PD + L     ++    D+  L PLND +
Subjt:  LVDSTIPSRTQLKLPKKGDSKFEGKELRLLKVARSPD-----DSTEEESQNSTGDRHWKRTKRPRKAS--DPDDKSLKSASNASQAPDDIETLLPLNDCV

Query:  QEEEECSSEQSLTSPDAFASSVKNFGSSYASSSKQVVNS-------------------------SSRSTEKVPQHTQKVVA----------PVFEASQFC
        +      S++SL  P A  S+ +  G+S    +K    S                         SS+         QKV +          P+ +A Q  
Subjt:  QEEEECSSEQSLTSPDAFASSVKNFGSSYASSSKQVVNS-------------------------SSRSTEKVPQHTQKVVA----------PVFEASQFC

Query:  ADDTKVAELEAKLTSAEAKVESLSNSVSEKEKDLAHEKLVVSKIREEISDIECAPTISASDVCTLATLHGLLESTRDELKALQW
         ++   A  EA     E + ++       + K +  ++L ++K+++E++ +E  P I+   +  LAT+   +E+TR+E K  +W
Subjt:  ADDTKVAELEAKLTSAEAKVESLSNSVSEKEKDLAHEKLVVSKIREEISDIECAPTISASDVCTLATLHGLLESTRDELKALQW

A0A5D3CRJ3 Uncharacterized protein1.9e-0630.16Show/hide
Query:  LVDSTIPSRTQLKLPKKGDSKFEGKELRLLK-VARSPDDSTEE---ESQNSTGDRHWKRTKRPRKASDPDDKSLKSASNASQAPDDIETLLPLNDCVQEE
        LV S IP  +Q KLPK   S   GKE+RL++ VA + ++  +E   +S  S  DRHWKR  +  K SD D   L    +++    D+  L PLN   +  
Subjt:  LVDSTIPSRTQLKLPKKGDSKFEGKELRLLK-VARSPDDSTEE---ESQNSTGDRHWKRTKRPRKASDPDDKSLKSASNASQAPDDIETLLPLNDCVQEE

Query:  EECSSEQSLTSPDAFASSVKNFGSSYASSSKQVVNSSSRSTEKVPQHTQKV-VAPVFEASQFCADDT----------------KVAELEAKLTSAEAKVE
         E  S++SL  P A  S+++  G+S   +SK V  S   ST        KV V   +  S+    D                 +  ELE +L S   + E
Subjt:  EECSSEQSLTSPDAFASSVKNFGSSYASSSKQVVNSSSRSTEKVPQHTQKV-VAPVFEASQFCADDT----------------KVAELEAKLTSAEAKVE

Query:  SLSNSVSEKEKDLAHEKLVVSKIREEISDIECAPTISASDVCTLATLHGLLE
         LS    +K + +  ++L V+K ++E++ +E   TI+   +  LA +   +E
Subjt:  SLSNSVSEKEKDLAHEKLVVSKIREEISDIECAPTISASDVCTLATLHGLLE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCCAATCAGCTCTTGGACTTCCTTTTGGTTCAAAGGTGAACAGAGGCATAAGTAAGTTGGTTGACAGTACCATTCCCTCTCGAACCCAGCTTAAGCTACCTAAAAA
AGGAGACTCTAAATTTGAGGGAAAAGAACTCCGACTGCTCAAGGTTGCCAGATCTCCAGACGATTCAACTGAAGAAGAGAGTCAAAACAGCACTGGAGATCGACACTGGA
AAAGAACCAAAAGGCCCAGGAAAGCTTCTGATCCCGATGACAAGTCCCTCAAGAGTGCTTCTAATGCTTCACAGGCTCCTGACGACATCGAGACTTTGCTGCCTTTAAAT
GACTGTGTTCAAGAAGAGGAAGAATGTTCGAGCGAGCAATCTTTGACAAGTCCTGATGCTTTTGCTTCTTCCGTGAAGAACTTTGGTAGCTCTTATGCATCTTCGAGCAA
ACAAGTTGTGAATTCGTCTTCTCGTTCTACTGAGAAAGTTCCTCAACATACACAGAAAGTGGTTGCCCCAGTCTTTGAGGCTTCTCAGTTCTGTGCTGATGATACCAAGG
TTGCAGAACTAGAGGCCAAGTTAACATCTGCAGAGGCCAAGGTAGAAAGCCTTTCCAATTCGGTCTCTGAAAAGGAAAAGGACTTAGCTCATGAAAAACTTGTAGTTTCG
AAAATACGTGAGGAGATTAGTGACATCGAGTGTGCCCCCACCATCAGCGCTTCAGACGTTTGCACCCTAGCGACACTTCACGGACTTTTGGAGAGTACTCGTGACGAGCT
GAAGGCACTTCAATGGAATCCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTCCAATCAGCTCTTGGACTTCCTTTTGGTTCAAAGGTGAACAGAGGCATAAGTAAGTTGGTTGACAGTACCATTCCCTCTCGAACCCAGCTTAAGCTACCTAAAAA
AGGAGACTCTAAATTTGAGGGAAAAGAACTCCGACTGCTCAAGGTTGCCAGATCTCCAGACGATTCAACTGAAGAAGAGAGTCAAAACAGCACTGGAGATCGACACTGGA
AAAGAACCAAAAGGCCCAGGAAAGCTTCTGATCCCGATGACAAGTCCCTCAAGAGTGCTTCTAATGCTTCACAGGCTCCTGACGACATCGAGACTTTGCTGCCTTTAAAT
GACTGTGTTCAAGAAGAGGAAGAATGTTCGAGCGAGCAATCTTTGACAAGTCCTGATGCTTTTGCTTCTTCCGTGAAGAACTTTGGTAGCTCTTATGCATCTTCGAGCAA
ACAAGTTGTGAATTCGTCTTCTCGTTCTACTGAGAAAGTTCCTCAACATACACAGAAAGTGGTTGCCCCAGTCTTTGAGGCTTCTCAGTTCTGTGCTGATGATACCAAGG
TTGCAGAACTAGAGGCCAAGTTAACATCTGCAGAGGCCAAGGTAGAAAGCCTTTCCAATTCGGTCTCTGAAAAGGAAAAGGACTTAGCTCATGAAAAACTTGTAGTTTCG
AAAATACGTGAGGAGATTAGTGACATCGAGTGTGCCCCCACCATCAGCGCTTCAGACGTTTGCACCCTAGCGACACTTCACGGACTTTTGGAGAGTACTCGTGACGAGCT
GAAGGCACTTCAATGGAATCCTTAA
Protein sequenceShow/hide protein sequence
MFQSALGLPFGSKVNRGISKLVDSTIPSRTQLKLPKKGDSKFEGKELRLLKVARSPDDSTEEESQNSTGDRHWKRTKRPRKASDPDDKSLKSASNASQAPDDIETLLPLN
DCVQEEEECSSEQSLTSPDAFASSVKNFGSSYASSSKQVVNSSSRSTEKVPQHTQKVVAPVFEASQFCADDTKVAELEAKLTSAEAKVESLSNSVSEKEKDLAHEKLVVS
KIREEISDIECAPTISASDVCTLATLHGLLESTRDELKALQWNP