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Spg005498 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg005498
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionL10-interacting MYB domain-containing protein-like
Genome locationscaffold7:25869404..25872439
RNA-Seq ExpressionSpg005498
SyntenySpg005498
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651219.1 hypothetical protein Csa_000986 [Cucumis sativus]1.4e-0834.45Show/hide
Query:  VDEVNETDELKSKGPWPDKNDTIFVDLMDEEIAKDNRPTTTFTRTSWNYMRNGLNID---SEDENDVGRNKNFIRENNDPEK------DGEAYTKVL-TL
        +++VN+ D  +  GPW  KN+TIF++LM++E+AK NRPTTTFT+TSW Y++  L +    +     +    N +R      K      +G+ +  VL T+
Subjt:  VDEVNETDELKSKGPWPDKNDTIFVDLMDEEIAKDNRPTTTFTRTSWNYMRNGLNID---SEDENDVGRNKNFIRENNDPEK------DGEAYTKVL-TL

Query:  LHGDVAWRKLLLLMPDAMK
          G+  W  L+ +   A K
Subjt:  LHGDVAWRKLLLLMPDAMK

XP_008461742.1 PREDICTED: L10-interacting MYB domain-containing protein-like [Cucumis melo]6.7e-1127.39Show/hide
Query:  ETDELKSKGPWPDKNDTIFVDLMDEEIAKDNRPTTTFTRTSWNYMRNGLN--------------------------------------------------
        + D LK +  W +K++ +FVDLMDEE+AK NRPTTTFT+TSWNYMR+ LN                                                  
Subjt:  ETDELKSKGPWPDKNDTIFVDLMDEEIAKDNRPTTTFTRTSWNYMRNGLN--------------------------------------------------

Query:  -----IDSEDENDVGRN------------------------------------KNFIRENNDPEK-----------------------------------
              + E+ENDV RN                                    +N +R N+  EK                                   
Subjt:  -----IDSEDENDVGRN------------------------------------KNFIRENNDPEK-----------------------------------

Query:  -----DGEAYTKVLTLLHGDVAWRKLLLLMPDAMKKDFIRS
             DG+ Y+K+L LLH D+ WRKL L MPD+ K+DFI S
Subjt:  -----DGEAYTKVLTLLHGDVAWRKLLLLMPDAMKKDFIRS

XP_038904552.1 L10-interacting MYB domain-containing protein-like isoform X1 [Benincasa hispida]6.7e-1148.65Show/hide
Query:  VGLAPFAAMSQKSSEKHCVDEVNETDELKSKGPWPDKNDTIFVDLMDEEIAKDNRPTTTFTRTSWNYMRNGLNI
        + LAP A  +Q   + +C+++V + D  K  GPW  KN++IF+DLM+EE+AK NRPTTTFT+TSW Y++  L +
Subjt:  VGLAPFAAMSQKSSEKHCVDEVNETDELKSKGPWPDKNDTIFVDLMDEEIAKDNRPTTTFTRTSWNYMRNGLNI

XP_038904553.1 L10-interacting MYB domain-containing protein-like isoform X2 [Benincasa hispida]2.0e-1053.45Show/hide
Query:  HCVDEVNETDELKSKGPWPDKNDTIFVDLMDEEIAKDNRPTTTFTRTSWNYMRNGLNI
        +C+++V + D  K  GPW  KN++IF+DLM+EE+AK NRPTTTFT+TSW Y++  L +
Subjt:  HCVDEVNETDELKSKGPWPDKNDTIFVDLMDEEIAKDNRPTTTFTRTSWNYMRNGLNI

XP_038904554.1 L10-interacting MYB domain-containing protein-like isoform X3 [Benincasa hispida]2.0e-1053.45Show/hide
Query:  HCVDEVNETDELKSKGPWPDKNDTIFVDLMDEEIAKDNRPTTTFTRTSWNYMRNGLNI
        +C+++V + D  K  GPW  KN++IF+DLM+EE+AK NRPTTTFT+TSW Y++  L +
Subjt:  HCVDEVNETDELKSKGPWPDKNDTIFVDLMDEEIAKDNRPTTTFTRTSWNYMRNGLNI

TrEMBL top hitse value%identityAlignment
A0A1S3B8P1 uncharacterized protein LOC103487000 isoform X11.2e-0833.33Show/hide
Query:  LAPFAAMSQKSSEKHCVDEVNETDELKSKGPWPDKNDTIFVDLMDEEIAKDNRPTTTFTRTSWNYMRNGLNID---SEDENDVGRNKNFIRENNDPEK--
        LAP    SQ   + + +++V++ D  +  GPW  KN+TIF++LM++E+AK NRPTTTFT+TSW Y++  L +    +     +    N +R      K  
Subjt:  LAPFAAMSQKSSEKHCVDEVNETDELKSKGPWPDKNDTIFVDLMDEEIAKDNRPTTTFTRTSWNYMRNGLNID---SEDENDVGRNKNFIRENNDPEK--

Query:  ----DGEAYTKVL-TLLHGDVAWRKLLLLMPDAMK
            +G+ +  VL T+  G+  W  L+ +  +A K
Subjt:  ----DGEAYTKVL-TLLHGDVAWRKLLLLMPDAMK

A0A1S3CFA7 L10-interacting MYB domain-containing protein-like3.3e-1127.39Show/hide
Query:  ETDELKSKGPWPDKNDTIFVDLMDEEIAKDNRPTTTFTRTSWNYMRNGLN--------------------------------------------------
        + D LK +  W +K++ +FVDLMDEE+AK NRPTTTFT+TSWNYMR+ LN                                                  
Subjt:  ETDELKSKGPWPDKNDTIFVDLMDEEIAKDNRPTTTFTRTSWNYMRNGLN--------------------------------------------------

Query:  -----IDSEDENDVGRN------------------------------------KNFIRENNDPEK-----------------------------------
              + E+ENDV RN                                    +N +R N+  EK                                   
Subjt:  -----IDSEDENDVGRN------------------------------------KNFIRENNDPEK-----------------------------------

Query:  -----DGEAYTKVLTLLHGDVAWRKLLLLMPDAMKKDFIRS
             DG+ Y+K+L LLH D+ WRKL L MPD+ K+DFI S
Subjt:  -----DGEAYTKVLTLLHGDVAWRKLLLLMPDAMKKDFIRS

A0A1S4DUG7 L10-interacting MYB domain-containing protein-like isoform X21.5e-0833.61Show/hide
Query:  VDEVNETDELKSKGPWPDKNDTIFVDLMDEEIAKDNRPTTTFTRTSWNYMRNGLNID---SEDENDVGRNKNFIRENNDPEK------DGEAYTKVL-TL
        +++V++ D  +  GPW  KN+TIF++LM++E+AK NRPTTTFT+TSW Y++  L +    +     +    N +R      K      +G+ +  VL T+
Subjt:  VDEVNETDELKSKGPWPDKNDTIFVDLMDEEIAKDNRPTTTFTRTSWNYMRNGLNID---SEDENDVGRNKNFIRENNDPEK------DGEAYTKVL-TL

Query:  LHGDVAWRKLLLLMPDAMK
          G+  W  L+ +  +A K
Subjt:  LHGDVAWRKLLLLMPDAMK

A0A5D3C5P0 L10-interacting MYB domain-containing protein-like4.1e-0635.48Show/hide
Query:  VNETDELKSKGPWPDKND---TIFVDLMDEEIAKDNRPTTTFTRTSWNYMRNGLNIDSEDENDVGRNKNFIRE---------NNDPEKDGEAYTKVLTLL
        V E D+ KSK     K D   + F   +D       R      + S+     G      DE+     K+ + E         N   + DGEAY+K+L LL
Subjt:  VNETDELKSKGPWPDKND---TIFVDLMDEEIAKDNRPTTTFTRTSWNYMRNGLNIDSEDENDVGRNKNFIRE---------NNDPEKDGEAYTKVLTLL

Query:  HGDVAWRKLLLLMPDAMKKDFIRS
        HGD+AWRKL L MPD+ K+DFI S
Subjt:  HGDVAWRKLLLLMPDAMKKDFIRS

A0A6J5WJY6 SRP54 domain-containing protein7.5e-0850.79Show/hide
Query:  QKSSEKHCVDEVNETDELKSKGPWPDKNDTIFVDLMDEEIAKDNRPTTTFTRTSWNYMRNGLN
        +K  E    ++V E DE    GPWP  N+ IF+DLMDEEI+KDNR TT F++TSW  M + L+
Subjt:  QKSSEKHCVDEVNETDELKSKGPWPDKNDTIFVDLMDEEIAKDNRPTTTFTRTSWNYMRNGLN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGTCCATCTTCCGTGCTCGATTCTTGCATTTCTTTTTTCTGGGGTTTCCTTGTTCTTGATCATGGACTAGAATGTGGAAGATCTGATTCTATTTTTGACGATAATATAGA
GTGGAATATTCCTCTTCGAGCTTCTTGTTCTTCCATCGCGCTCGGCGATTCTGAAACAAGACGGCGACCTGCCGAGGATCAAGTCCCAGTTCAGAAGCCAACCGATCTTT
CCTCACCAATTCCAATTTGTGCTCGTTCCCAAAATTCATCTCCAAAAGCTTCACTTGCTCTAAACTCAGCTTTCCTCTTCTTCAACCCCGCCGCCCCGGCCGCTTCCTTC
GCTTTGCTCCTCCTCCGCCGTCTCTTCGTCGGCTTAGCTCCCTTCGCCGCGATGTCGCAAAAATCATCAGAAAAGCATTGTGTTGATGAGGTCAATGAAACTGATGAGTT
GAAAAGTAAGGGACCATGGCCTGACAAGAATGACACTATATTTGTTGACTTAATGGATGAAGAGATTGCAAAGGACAATCGACCAACTACAACATTTACTAGGACTAGTT
GGAATTATATGAGAAACGGACTAAACATTGATTCTGAAGATGAAAATGATGTTGGAAGAAATAAAAATTTTATTCGTGAAAACAATGATCCTGAAAAAGATGGAGAGGCT
TATACTAAAGTGCTTACACTATTGCATGGAGATGTTGCTTGGAGAAAGTTATTGTTGCTTATGCCTGATGCGATGAAGAAAGATTTCATTCGTAGTAACTAG
mRNA sequenceShow/hide mRNA sequence
GGTCCATCTTCCGTGCTCGATTCTTGCATTTCTTTTTTCTGGGGTTTCCTTGTTCTTGATCATGGACTAGAATGTGGAAGATCTGATTCTATTTTTGACGATAATATAGA
GTGGAATATTCCTCTTCGAGCTTCTTGTTCTTCCATCGCGCTCGGCGATTCTGAAACAAGACGGCGACCTGCCGAGGATCAAGTCCCAGTTCAGAAGCCAACCGATCTTT
CCTCACCAATTCCAATTTGTGCTCGTTCCCAAAATTCATCTCCAAAAGCTTCACTTGCTCTAAACTCAGCTTTCCTCTTCTTCAACCCCGCCGCCCCGGCCGCTTCCTTC
GCTTTGCTCCTCCTCCGCCGTCTCTTCGTCGGCTTAGCTCCCTTCGCCGCGATGTCGCAAAAATCATCAGAAAAGCATTGTGTTGATGAGGTCAATGAAACTGATGAGTT
GAAAAGTAAGGGACCATGGCCTGACAAGAATGACACTATATTTGTTGACTTAATGGATGAAGAGATTGCAAAGGACAATCGACCAACTACAACATTTACTAGGACTAGTT
GGAATTATATGAGAAACGGACTAAACATTGATTCTGAAGATGAAAATGATGTTGGAAGAAATAAAAATTTTATTCGTGAAAACAATGATCCTGAAAAAGATGGAGAGGCT
TATACTAAAGTGCTTACACTATTGCATGGAGATGTTGCTTGGAGAAAGTTATTGTTGCTTATGCCTGATGCGATGAAGAAAGATTTCATTCGTAGTAACTAG
Protein sequenceShow/hide protein sequence
GPSSVLDSCISFFWGFLVLDHGLECGRSDSIFDDNIEWNIPLRASCSSIALGDSETRRRPAEDQVPVQKPTDLSSPIPICARSQNSSPKASLALNSAFLFFNPAAPAASF
ALLLLRRLFVGLAPFAAMSQKSSEKHCVDEVNETDELKSKGPWPDKNDTIFVDLMDEEIAKDNRPTTTFTRTSWNYMRNGLNIDSEDENDVGRNKNFIRENNDPEKDGEA
YTKVLTLLHGDVAWRKLLLLMPDAMKKDFIRSN