; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg005506 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg005506
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationscaffold7:27876650..27882574
RNA-Seq ExpressionSpg005506
SyntenySpg005506
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061113.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.6e-3830.77Show/hide
Query:  LKNQLIQFGTLDPVVVRCQKEATMKGSQGKYDSIEDENEGWTLVIRRKKQKQSYARKESRIFRDSKRKVKSQRKKGKKKTRRSKSVVEESEDFFCPPQPI
        LK  +++      + +  ++E T + SQ K   IE+++EGWT+V RRKK+K +  +KESR++ + +R  K+Q+ K KKKTR+ K V E+ +DF    + +
Subjt:  LKNQLIQFGTLDPVVVRCQKEATMKGSQGKYDSIEDENEGWTLVIRRKKQKQSYARKESRIFRDSKRKVKSQRKKGKKKTRRSKSVVEESEDFFCPPQPI

Query:  TLAEYFPRCFLDDSQGEALETVT-----------------CHIVDVVEDD--------DVPASSSGTV------------AGPGDLSSFSIKDLLSLSQE
        TLA++FP  FL D Q E    V                  C  +D  ++D        + P   SG V                ++   S    L +  E
Subjt:  TLAEYFPRCFLDDSQGEALETVT-----------------CHIVDVVEDD--------DVPASSSGTV------------AGPGDLSSFSIKDLLSLSQE

Query:  AKSNEKL---------------------------------------NLEPRADARKETVEDVEASDLKKGETSSSLVKPKVVKDEKCS--PVLQYVPLSR
          SN KL                                       NL+ ++ A +E+ +        K E S+S  K  +V DEK S  P+L+YVPLSR
Subjt:  AKSNEKL---------------------------------------NLEPRADARKETVEDVEASDLKKGETSSSLVKPKVVKDEKCS--PVLQYVPLSR

Query:  RKKGESPFTKCPKSIK-----------------------------------------------------------------------------KKLLKEG
        RKKGESPF + P+ +K                                                                             KKLL+EG
Subjt:  RKKGESPFTKCPKSIK-----------------------------------------------------------------------------KKLLKEG

Query:  YSFPTIRKGLGYKSPEPICITRKGKAKVAHINHITVEEVDDSKEKESIDQRTSVFRRIRSPVARASVFQRLIVNETKEESAQPTNNSTRSSVFRRLSMFI
        ++ P  RKGLGYK PEPI ITRKGK KV   NHITV+EVD  +EKE   QRTS F R+   VARA VF+RL + E + +  Q T++  R S F+RL+M  
Subjt:  YSFPTIRKGLGYKSPEPICITRKGKAKVAHINHITVEEVDDSKEKESIDQRTSVFRRIRSPVARASVFQRLIVNETKEESAQPTNNSTRSSVFRRLSMFI

Query:  EEEESIL
        + E+  L
Subjt:  EEEESIL

KAA0061113.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]2.4e-1046.53Show/hide
Query:  SRSQGIEIKEDHTPLAVASRISKLIEESSKDKVAVKDNPLFEYVIPTSKQPKDTLNPDVMFVMMADVDQDERMTEMERKLNLLMKAVDERDLEIAYLKNQ
        SRS+GI  ++D     VA  I K + ES K  + +K+NPL++    +S + K   +PDVM VMMAD+  +  M EMERK+N LMKAV+ERD EI  L+ Q
Subjt:  SRSQGIEIKEDHTPLAVASRISKLIEESSKDKVAVKDNPLFEYVIPTSKQPKDTLNPDVMFVMMADVDQDERMTEMERKLNLLMKAVDERDLEIAYLKNQ

Query:  L
        +
Subjt:  L

KAA0061113.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]3.5e-3827.43Show/hide
Query:  KNQLIQFGTLDPVVVRCQKEATMKGSQGKYDSIEDENEGWTLVIRRKKQKQSYARKESRIFRDSKRKVKSQRKKGKKKTRRSKSVVEESEDFFCPPQPIT
        +  L+QFGT +P+VV+  +E + +  QG+   IE+++EGW +V  RKK++    ++ESR +++ +R  K+Q+ K KKKT + K V  E  +F  P + +T
Subjt:  KNQLIQFGTLDPVVVRCQKEATMKGSQGKYDSIEDENEGWTLVIRRKKQKQSYARKESRIFRDSKRKVKSQRKKGKKKTRRSKSVVEESEDFFCPPQPIT

Query:  LAEYFPRCFLDDSQGEALETVTCHIVDVVEDDDVPASSSGTVAGPGDLSSFSIKDLLSLSQEAK---------------------------------SNE
        LA++ P+ FL D Q E  E V CH ++  E++ +P  S        DLS F+++DLLSL QE K                                 S+E
Subjt:  LAEYFPRCFLDDSQGEALETVTCHIVDVVEDDDVPASSSGTVAGPGDLSSFSIKDLLSLSQEAK---------------------------------SNE

Query:  KL---------------------------------NLEPRA---------------------------------------------------DAR-----
         L                                 N+ P++                                                   D+R     
Subjt:  KL---------------------------------NLEPRA---------------------------------------------------DAR-----

Query:  ------------------------KETVEDVEA----------------------------------------SDLK-----------------KGETSS
                                ++ V+ VEA                                        S LK                 KGE  +
Subjt:  ------------------------KETVEDVEA----------------------------------------SDLK-----------------KGETSS

Query:  SLVKPKVVKDEKC--SPVLQYVPLSRRKKGESPFTKCPKSIK----------------------------------------------------------
        S  K  ++KDE    +PVL+YVPLSRRKKGESPF + PK +K                                                          
Subjt:  SLVKPKVVKDEKC--SPVLQYVPLSRRKKGESPFTKCPKSIK----------------------------------------------------------

Query:  -------------------KKLLKEGYSFPTIRKGLGYKSPEPICITRKGKAKVAHINHITVEEVDDSKEKESIDQRTSVFRRIRSPVARASVFQRLIVN
                           KKLL+EG+S P  RKGLGYKSPEPI IT+KGK KV  INHIT+EE D++  KE  +QR SVF RIR  VAR  VF+RL + 
Subjt:  -------------------KKLLKEGYSFPTIRKGLGYKSPEPICITRKGKAKVAHINHITVEEVDDSKEKESIDQRTSVFRRIRSPVARASVFQRLIVN

Query:  ETKEESAQPTNNSTRSSVFRRLSMFIEEEESILSTPDVMRPSPFRRLNM
        E + E  Q   N  R SVFRRL+    +EES        RPS F RL +
Subjt:  ETKEESAQPTNNSTRSSVFRRLSMFIEEEESILSTPDVMRPSPFRRLNM

TYK05005.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]2.6e-4128.74Show/hide
Query:  LLMKAVDERDLEIAYLKNQLIQFGTLDPVVVRCQKEATMKGSQGKYDSIEDENEGWTLVIRRKKQKQSYARKESRIFRDSKRKVKSQRKKGKKKTRRSKS
        L+++   E+ +E+      L +FGT +PVVVR  +E   + SQ K   IE+++E WT+V RRKK+K +  +KE R +R+ +R  K+Q+ K KKKTR+ K 
Subjt:  LLMKAVDERDLEIAYLKNQLIQFGTLDPVVVRCQKEATMKGSQGKYDSIEDENEGWTLVIRRKKQKQSYARKESRIFRDSKRKVKSQRKKGKKKTRRSKS

Query:  VVEESEDFFCPPQPITLAEYFPRCFLDDSQGEALETVTCHIVDVVEDDDVPASSSGTVAGPGDLSSFSIKDLLSLSQEAK--------------------
        + +E +DF    + ITLA++FP  FL D Q E    V CH ++  E++ +P  S        DLS F++ DLLSL QE K                    
Subjt:  VVEESEDFFCPPQPITLAEYFPRCFLDDSQGEALETVTCHIVDVVEDDDVPASSSGTVAGPGDLSSFSIKDLLSLSQEAK--------------------

Query:  ---------------------------------------------------------------------SNEKL--------------------------
                                                                             SN KL                          
Subjt:  ---------------------------------------------------------------------SNEKL--------------------------

Query:  ----------------------------------NLEPRADARKETVEDVEASDLKKGETSSSLVKPKVVKDEKCS--PVLQYVPLSRRKKGESPFTKCP
                                          NL+ ++ A KE    +     +K E S+S  K  ++ DEK S   +L+YVPLSRRKKGESPF + P
Subjt:  ----------------------------------NLEPRADARKETVEDVEASDLKKGETSSSLVKPKVVKDEKCS--PVLQYVPLSRRKKGESPFTKCP

Query:  KSIK-----------------------------------------------------------------------------KKLLKEGYSFPTIRKGLGY
        + +K                                                                             KKLL+EG++ P  RKGLGY
Subjt:  KSIK-----------------------------------------------------------------------------KKLLKEGYSFPTIRKGLGY

Query:  KSPEPICITRKGKAKVAHINHITVEEVDDSKEKESIDQRTSVFRRIRSPVARASVFQRLIVNETKEESAQPTNNSTRSSVFRRLSMFIEEEESILSTPDV
        K PEPI ITRKGK K+   NHITV+EVD  KEKE   QRTS F RI   VARA VF+RL V E + +  Q T+N  R S F RLS+  ++       P +
Subjt:  KSPEPICITRKGKAKVAHINHITVEEVDDSKEKESIDQRTSVFRRIRSPVARASVFQRLIVNETKEESAQPTNNSTRSSVFRRLSMFIEEEESILSTPDV

Query:  MR
         R
Subjt:  MR

XP_031739134.1 uncharacterized protein LOC116402863 [Cucumis sativus]1.1e-1040.27Show/hide
Query:  SRSQGIEIKEDHTPLAVASRISKLIEESSKDKVAVKDNPLFEYVIPTSKQPKDTLNPDVMFVMMADVDQDERMTEMERKLNLLMKAVDERDLEIAYLKNQ
        SRS+GI I+      A+A  I K + ES K  + +K+NPL+      S +     +PDVM VMMADV  +  M EMERK+NLLMK VDERD EIA LK Q
Subjt:  SRSQGIEIKEDHTPLAVASRISKLIEESSKDKVAVKDNPLFEYVIPTSKQPKDTLNPDVMFVMMADVDQDERMTEMERKLNLLMKAVDERDLEIAYLKNQ

Query:  LIQFGTLDPVVVRCQKEATMKGSQGKYDSIEDENEGWTLVIRRKKQKQS
        +             Q   T + SQ     ++D  +G  +V   + Q+QS
Subjt:  LIQFGTLDPVVVRCQKEATMKGSQGKYDSIEDENEGWTLVIRRKKQKQS

XP_031739134.1 uncharacterized protein LOC116402863 [Cucumis sativus]3.5e-3827.43Show/hide
Query:  KNQLIQFGTLDPVVVRCQKEATMKGSQGKYDSIEDENEGWTLVIRRKKQKQSYARKESRIFRDSKRKVKSQRKKGKKKTRRSKSVVEESEDFFCPPQPIT
        +  L+QFGT +P+VV+  +E + +  QG+   IE+++EGW +V  RKK++    ++ESR +++ +R  K+Q+ K KKKT + K V  E  +F  P + +T
Subjt:  KNQLIQFGTLDPVVVRCQKEATMKGSQGKYDSIEDENEGWTLVIRRKKQKQSYARKESRIFRDSKRKVKSQRKKGKKKTRRSKSVVEESEDFFCPPQPIT

Query:  LAEYFPRCFLDDSQGEALETVTCHIVDVVEDDDVPASSSGTVAGPGDLSSFSIKDLLSLSQEAK---------------------------------SNE
        LA++ P+ FL D Q E  E V CH ++  E++ +P  S        DLS F+++DLLSL QE K                                 S+E
Subjt:  LAEYFPRCFLDDSQGEALETVTCHIVDVVEDDDVPASSSGTVAGPGDLSSFSIKDLLSLSQEAK---------------------------------SNE

Query:  KL---------------------------------NLEPRA---------------------------------------------------DAR-----
         L                                 N+ P++                                                   D+R     
Subjt:  KL---------------------------------NLEPRA---------------------------------------------------DAR-----

Query:  ------------------------KETVEDVEA----------------------------------------SDLK-----------------KGETSS
                                ++ V+ VEA                                        S LK                 KGE  +
Subjt:  ------------------------KETVEDVEA----------------------------------------SDLK-----------------KGETSS

Query:  SLVKPKVVKDEKC--SPVLQYVPLSRRKKGESPFTKCPKSIK----------------------------------------------------------
        S  K  ++KDE    +PVL+YVPLSRRKKGESPF + PK +K                                                          
Subjt:  SLVKPKVVKDEKC--SPVLQYVPLSRRKKGESPFTKCPKSIK----------------------------------------------------------

Query:  -------------------KKLLKEGYSFPTIRKGLGYKSPEPICITRKGKAKVAHINHITVEEVDDSKEKESIDQRTSVFRRIRSPVARASVFQRLIVN
                           KKLL+EG+S P  RKGLGYKSPEPI IT+KGK KV  INHIT+EE D++  KE  +QR SVF RIR  VAR  VF+RL + 
Subjt:  -------------------KKLLKEGYSFPTIRKGLGYKSPEPICITRKGKAKVAHINHITVEEVDDSKEKESIDQRTSVFRRIRSPVARASVFQRLIVN

Query:  ETKEESAQPTNNSTRSSVFRRLSMFIEEEESILSTPDVMRPSPFRRLNM
        E + E  Q   N  R SVFRRL+    +EES        RPS F RL +
Subjt:  ETKEESAQPTNNSTRSSVFRRLSMFIEEEESILSTPDVMRPSPFRRLNM

XP_031740568.1 uncharacterized protein LOC116403508 [Cucumis sativus]1.1e-1040.27Show/hide
Query:  SRSQGIEIKEDHTPLAVASRISKLIEESSKDKVAVKDNPLFEYVIPTSKQPKDTLNPDVMFVMMADVDQDERMTEMERKLNLLMKAVDERDLEIAYLKNQ
        SRS+GI I+      A+A  I K + ES K  + +K+NPL+      S +     +PDVM VMMADV  +  M EMERK+NLLMK VDERD EIA LK Q
Subjt:  SRSQGIEIKEDHTPLAVASRISKLIEESSKDKVAVKDNPLFEYVIPTSKQPKDTLNPDVMFVMMADVDQDERMTEMERKLNLLMKAVDERDLEIAYLKNQ

Query:  LIQFGTLDPVVVRCQKEATMKGSQGKYDSIEDENEGWTLVIRRKKQKQS
        +             Q   T + SQ     ++D  +G  +V   + Q+QS
Subjt:  LIQFGTLDPVVVRCQKEATMKGSQGKYDSIEDENEGWTLVIRRKKQKQS

XP_031740568.1 uncharacterized protein LOC116403508 [Cucumis sativus]4.6e-3827.43Show/hide
Query:  KNQLIQFGTLDPVVVRCQKEATMKGSQGKYDSIEDENEGWTLVIRRKKQKQSYARKESRIFRDSKRKVKSQRKKGKKKTRRSKSVVEESEDFFCPPQPIT
        +  L+QFGT +P+VV+  +E + +  QG+   IE+++EGW +V  RKK++    ++ESR +++ +R  K+Q+ K KKKT + K V  E  +F  P + +T
Subjt:  KNQLIQFGTLDPVVVRCQKEATMKGSQGKYDSIEDENEGWTLVIRRKKQKQSYARKESRIFRDSKRKVKSQRKKGKKKTRRSKSVVEESEDFFCPPQPIT

Query:  LAEYFPRCFLDDSQGEALETVTCHIVDVVEDDDVPASSSGTVAGPGDLSSFSIKDLLSLSQEAK---------------------------------SNE
        LA++ P+ FL D Q E  E V CH ++  E++ +P  S        DLS F+++DLLSL QE K                                 S+E
Subjt:  LAEYFPRCFLDDSQGEALETVTCHIVDVVEDDDVPASSSGTVAGPGDLSSFSIKDLLSLSQEAK---------------------------------SNE

Query:  KL---------------------------------NLEPRA---------------------------------------------------DAR-----
         L                                 N+ P++                                                   D+R     
Subjt:  KL---------------------------------NLEPRA---------------------------------------------------DAR-----

Query:  ------------------------KETVEDVEA----------------------------------------SDLK-----------------KGETSS
                                ++ V+ VEA                                        S LK                 KGE  +
Subjt:  ------------------------KETVEDVEA----------------------------------------SDLK-----------------KGETSS

Query:  SLVKPKVVKDEKC--SPVLQYVPLSRRKKGESPFTKCPKSIK----------------------------------------------------------
        S  K  ++KDE    +PVL+YVPLSRRKKGESPF + PK +K                                                          
Subjt:  SLVKPKVVKDEKC--SPVLQYVPLSRRKKGESPFTKCPKSIK----------------------------------------------------------

Query:  -------------------KKLLKEGYSFPTIRKGLGYKSPEPICITRKGKAKVAHINHITVEEVDDSKEKESIDQRTSVFRRIRSPVARASVFQRLIVN
                           KKLL+EG+S P  RKGLGYKSPEPI IT+KGK KV  INHIT+EE D++  KE  +QR SVF RIR  VAR  VF+RL + 
Subjt:  -------------------KKLLKEGYSFPTIRKGLGYKSPEPICITRKGKAKVAHINHITVEEVDDSKEKESIDQRTSVFRRIRSPVARASVFQRLIVN

Query:  ETKEESAQPTNNSTRSSVFRRLSMFIEEEESILSTPDVMRPSPFRRLNM
        E + E  Q   N  R SVFRRL+    +EES        RPS F RL +
Subjt:  ETKEESAQPTNNSTRSSVFRRLSMFIEEEESILSTPDVMRPSPFRRLNM

XP_031742032.1 uncharacterized protein LOC116404025 [Cucumis sativus]1.1e-1040.27Show/hide
Query:  SRSQGIEIKEDHTPLAVASRISKLIEESSKDKVAVKDNPLFEYVIPTSKQPKDTLNPDVMFVMMADVDQDERMTEMERKLNLLMKAVDERDLEIAYLKNQ
        SRS+GI I+      A+A  I K + ES K  + +K+NPL+      S +     +PDVM VMMADV  +  M EMERK+NLLMK VDERD EIA LK Q
Subjt:  SRSQGIEIKEDHTPLAVASRISKLIEESSKDKVAVKDNPLFEYVIPTSKQPKDTLNPDVMFVMMADVDQDERMTEMERKLNLLMKAVDERDLEIAYLKNQ

Query:  LIQFGTLDPVVVRCQKEATMKGSQGKYDSIEDENEGWTLVIRRKKQKQS
        +             Q   T + SQ     ++D  +G  +V   + Q+QS
Subjt:  LIQFGTLDPVVVRCQKEATMKGSQGKYDSIEDENEGWTLVIRRKKQKQS

TrEMBL top hitse value%identityAlignment
A0A5A7UMY2 Reverse transcriptase domain-containing protein3.6e-3640.68Show/hide
Query:  NEKLNLEPRADARKETVEDVEASDLKKGETSSSLVKPKVVKDEKCS--PVLQYVPLSRRKKGESPFTKCPKSIK--------------------------
        N + NL+ ++ A KE  + +      K E S++  K  ++ DEK S  P+L+YVPLSRRKKGESPF + P+ +K                          
Subjt:  NEKLNLEPRADARKETVEDVEASDLKKGETSSSLVKPKVVKDEKCS--PVLQYVPLSRRKKGESPFTKCPKSIK--------------------------

Query:  -----------------KKLLKEGYSFPTIRKGLGYKSPEPICITRKGKAKVAHINHITVEEVDDSKEKESIDQRTSVFRRIRSPVARASVFQRLIVNET
                         KKLL+EG+  P  RKGLGYKSPEPI ITRKGK KV   NHITV+EVD  +EKE  +QRTS F RI   VARA VF+RL + E 
Subjt:  -----------------KKLLKEGYSFPTIRKGLGYKSPEPICITRKGKAKVAHINHITVEEVDDSKEKESIDQRTSVFRRIRSPVARASVFQRLIVNET

Query:  KEESAQPTNNSTRSSVFRRLSMFIEEEESILSTPDVMRPSPFRRLNMPVGEEGGTFSTPNVTR
        K +  Q T+N  R S F+RL++  +EE+ I  T    +PS F RL++   +   T   P + R
Subjt:  KEESAQPTNNSTRSSVFRRLSMFIEEEESILSTPDVMRPSPFRRLNMPVGEEGGTFSTPNVTR

A0A5A7V9E7 Uncharacterized protein3.0e-3532.17Show/hide
Query:  KNQLIQFGTLDPVVVRCQKEATMKGSQGKYDSIEDENEGWTLVIRRKKQKQSYARKESRIFRDSKRKV---KSQRKKGKKKTRRSKSVVEESEDFFCPPQ
        +  L+QFG  +PVVV+  +E   + S+ K  SIE+++EGW +V RRKK+K +   K+S     +  K+   K+Q+ K KK TR+ K V EE++DF  P +
Subjt:  KNQLIQFGTLDPVVVRCQKEATMKGSQGKYDSIEDENEGWTLVIRRKKQKQSYARKESRIFRDSKRKV---KSQRKKGKKKTRRSKSVVEESEDFFCPPQ

Query:  PITLAEYFPRCFLDDSQGEALETVTCHIVDVVEDDDVPASSSGTVAGPGDLSSFSIKDLLSLSQEAKSN-------------------------------
         +TL ++FP  F  D Q E    V CH ++  E++ +P  S        DLS F++ DLLSL    +S+                               
Subjt:  PITLAEYFPRCFLDDSQGEALETVTCHIVDVVEDDDVPASSSGTVAGPGDLSSFSIKDLLSLSQEAKSN-------------------------------

Query:  -------EKLNLEP-----RADARKETVEDVEASDLK-----------------KGETSSSLVKPKVVKDEKCS--PVLQYVPLSRRKKGESPFTKCPKS
                KL   P      AD+   +  +   +D+K                  GE S+S  K  ++ DEK S  P+L Y+PLSR KKGESPF K P+ 
Subjt:  -------EKLNLEP-----RADARKETVEDVEASDLK-----------------KGETSSSLVKPKVVKDEKCS--PVLQYVPLSRRKKGESPFTKCPKS

Query:  IK----------------------------------------------KKLLKEGYSFPT-IRKGLGYKSPEPICITRKGKAKVAHINHITVEEVDDSKE
        +K                                              K ++K GY F T   KGLGY+SPEPI I RKGK KV   NHIT+EEVD  +E
Subjt:  IK----------------------------------------------KKLLKEGYSFPT-IRKGLGYKSPEPICITRKGKAKVAHINHITVEEVDDSKE

Query:  KESIDQRT--SVFRRIRSPVARASVFQRL
        KE    +T  S+  + + P +R SV+ R+
Subjt:  KESIDQRT--SVFRRIRSPVARASVFQRL

A0A5D3BY54 Ty3-gypsy retrotransposon protein7.7e-3930.77Show/hide
Query:  LKNQLIQFGTLDPVVVRCQKEATMKGSQGKYDSIEDENEGWTLVIRRKKQKQSYARKESRIFRDSKRKVKSQRKKGKKKTRRSKSVVEESEDFFCPPQPI
        LK  +++      + +  ++E T + SQ K   IE+++EGWT+V RRKK+K +  +KESR++ + +R  K+Q+ K KKKTR+ K V E+ +DF    + +
Subjt:  LKNQLIQFGTLDPVVVRCQKEATMKGSQGKYDSIEDENEGWTLVIRRKKQKQSYARKESRIFRDSKRKVKSQRKKGKKKTRRSKSVVEESEDFFCPPQPI

Query:  TLAEYFPRCFLDDSQGEALETVT-----------------CHIVDVVEDD--------DVPASSSGTV------------AGPGDLSSFSIKDLLSLSQE
        TLA++FP  FL D Q E    V                  C  +D  ++D        + P   SG V                ++   S    L +  E
Subjt:  TLAEYFPRCFLDDSQGEALETVT-----------------CHIVDVVEDD--------DVPASSSGTV------------AGPGDLSSFSIKDLLSLSQE

Query:  AKSNEKL---------------------------------------NLEPRADARKETVEDVEASDLKKGETSSSLVKPKVVKDEKCS--PVLQYVPLSR
          SN KL                                       NL+ ++ A +E+ +        K E S+S  K  +V DEK S  P+L+YVPLSR
Subjt:  AKSNEKL---------------------------------------NLEPRADARKETVEDVEASDLKKGETSSSLVKPKVVKDEKCS--PVLQYVPLSR

Query:  RKKGESPFTKCPKSIK-----------------------------------------------------------------------------KKLLKEG
        RKKGESPF + P+ +K                                                                             KKLL+EG
Subjt:  RKKGESPFTKCPKSIK-----------------------------------------------------------------------------KKLLKEG

Query:  YSFPTIRKGLGYKSPEPICITRKGKAKVAHINHITVEEVDDSKEKESIDQRTSVFRRIRSPVARASVFQRLIVNETKEESAQPTNNSTRSSVFRRLSMFI
        ++ P  RKGLGYK PEPI ITRKGK KV   NHITV+EVD  +EKE   QRTS F R+   VARA VF+RL + E + +  Q T++  R S F+RL+M  
Subjt:  YSFPTIRKGLGYKSPEPICITRKGKAKVAHINHITVEEVDDSKEKESIDQRTSVFRRIRSPVARASVFQRLIVNETKEESAQPTNNSTRSSVFRRLSMFI

Query:  EEEESIL
        + E+  L
Subjt:  EEEESIL

A0A5D3BY54 Ty3-gypsy retrotransposon protein1.2e-1046.53Show/hide
Query:  SRSQGIEIKEDHTPLAVASRISKLIEESSKDKVAVKDNPLFEYVIPTSKQPKDTLNPDVMFVMMADVDQDERMTEMERKLNLLMKAVDERDLEIAYLKNQ
        SRS+GI  ++D     VA  I K + ES K  + +K+NPL++    +S + K   +PDVM VMMAD+  +  M EMERK+N LMKAV+ERD EI  L+ Q
Subjt:  SRSQGIEIKEDHTPLAVASRISKLIEESSKDKVAVKDNPLFEYVIPTSKQPKDTLNPDVMFVMMADVDQDERMTEMERKLNLLMKAVDERDLEIAYLKNQ

Query:  L
        +
Subjt:  L

A0A5D3BY54 Ty3-gypsy retrotransposon protein8.5e-3826.24Show/hide
Query:  KNQLIQFGTLDPVVVRCQKEATMKGSQGKYDSIEDENEGWTLVIRRKKQKQSYARKESRIFRDSKRKVKSQRKKGKKKTRRSKSVVEESEDFFCPPQPIT
        +  L+QFGT +PVVVR  +E   + SQ K   IE+++EGWT+V RRKK+K +  +KE R +R+ ++  K+Q+ K KKKTR+ K + EE +DF    + +T
Subjt:  KNQLIQFGTLDPVVVRCQKEATMKGSQGKYDSIEDENEGWTLVIRRKKQKQSYARKESRIFRDSKRKVKSQRKKGKKKTRRSKSVVEESEDFFCPPQPIT

Query:  LAEYFPRCFLDDSQGEALETVTCHIVDVVEDDDVPASSSGTVAGPGDLSSFSIKDLLSLSQEAK------------------------------------
        LA++FP  FL D Q E    V CH ++ +E++++P  S        DLS F++ DLLSL QE K                                    
Subjt:  LAEYFPRCFLDDSQGEALETVTCHIVDVVEDDDVPASSSGTVAGPGDLSSFSIKDLLSLSQEAK------------------------------------

Query:  ------------------------------SNEKLNLEPRADAR--------------------------------------------------------
                                      +   +N+ P++  R                                                        
Subjt:  ------------------------------SNEKLNLEPRADAR--------------------------------------------------------

Query:  ------------------------KETVEDVEASDLKKGETSSSLVKPK--VVKDEKCSPVLQYVPL---------------------------------
                                ++ V+ VEA      E  S     K  +  D     V   VPL                                 
Subjt:  ------------------------KETVEDVEASDLKKGETSSSLVKPK--VVKDEKCSPVLQYVPL---------------------------------

Query:  ---SRRKKGESPFTKCPKSIK-----------------------------------------------------------------------------KK
            +RKKGESPF + P+ +K                                                                             KK
Subjt:  ---SRRKKGESPFTKCPKSIK-----------------------------------------------------------------------------KK

Query:  LLKEGYSFPTIRKGLGYKSPEPICITRKGKAKVAHINHITVEEVDDSKEKESIDQRTSVFRRIRSPVARASVFQRLIVNETKEESAQPTNNSTRSSVFRR
        LL+EG+  P  RKGLGYKSPEPI ITRKGK KV   NHITV+EVD  +E E   QRTS F RI   VAR  VF+RL + E + +  Q T+N  R SVF+R
Subjt:  LLKEGYSFPTIRKGLGYKSPEPICITRKGKAKVAHINHITVEEVDDSKEKESIDQRTSVFRRIRSPVARASVFQRLIVNETKEESAQPTNNSTRSSVFRR

Query:  LSMFIEEEESILSTPDVMRPSPFRRLNMPVGEEGGTFSTPNVTR
        L++  +EE+ I  T    +PS F RL++   +   T   P + R
Subjt:  LSMFIEEEESILSTPDVMRPSPFRRLNMPVGEEGGTFSTPNVTR

A0A5D3C0W6 Ty3-gypsy retrotransposon protein1.3e-4128.74Show/hide
Query:  LLMKAVDERDLEIAYLKNQLIQFGTLDPVVVRCQKEATMKGSQGKYDSIEDENEGWTLVIRRKKQKQSYARKESRIFRDSKRKVKSQRKKGKKKTRRSKS
        L+++   E+ +E+      L +FGT +PVVVR  +E   + SQ K   IE+++E WT+V RRKK+K +  +KE R +R+ +R  K+Q+ K KKKTR+ K 
Subjt:  LLMKAVDERDLEIAYLKNQLIQFGTLDPVVVRCQKEATMKGSQGKYDSIEDENEGWTLVIRRKKQKQSYARKESRIFRDSKRKVKSQRKKGKKKTRRSKS

Query:  VVEESEDFFCPPQPITLAEYFPRCFLDDSQGEALETVTCHIVDVVEDDDVPASSSGTVAGPGDLSSFSIKDLLSLSQEAK--------------------
        + +E +DF    + ITLA++FP  FL D Q E    V CH ++  E++ +P  S        DLS F++ DLLSL QE K                    
Subjt:  VVEESEDFFCPPQPITLAEYFPRCFLDDSQGEALETVTCHIVDVVEDDDVPASSSGTVAGPGDLSSFSIKDLLSLSQEAK--------------------

Query:  ---------------------------------------------------------------------SNEKL--------------------------
                                                                             SN KL                          
Subjt:  ---------------------------------------------------------------------SNEKL--------------------------

Query:  ----------------------------------NLEPRADARKETVEDVEASDLKKGETSSSLVKPKVVKDEKCS--PVLQYVPLSRRKKGESPFTKCP
                                          NL+ ++ A KE    +     +K E S+S  K  ++ DEK S   +L+YVPLSRRKKGESPF + P
Subjt:  ----------------------------------NLEPRADARKETVEDVEASDLKKGETSSSLVKPKVVKDEKCS--PVLQYVPLSRRKKGESPFTKCP

Query:  KSIK-----------------------------------------------------------------------------KKLLKEGYSFPTIRKGLGY
        + +K                                                                             KKLL+EG++ P  RKGLGY
Subjt:  KSIK-----------------------------------------------------------------------------KKLLKEGYSFPTIRKGLGY

Query:  KSPEPICITRKGKAKVAHINHITVEEVDDSKEKESIDQRTSVFRRIRSPVARASVFQRLIVNETKEESAQPTNNSTRSSVFRRLSMFIEEEESILSTPDV
        K PEPI ITRKGK K+   NHITV+EVD  KEKE   QRTS F RI   VARA VF+RL V E + +  Q T+N  R S F RLS+  ++       P +
Subjt:  KSPEPICITRKGKAKVAHINHITVEEVDDSKEKESIDQRTSVFRRIRSPVARASVFQRLIVNETKEESAQPTNNSTRSSVFRRLSMFIEEEESILSTPDV

Query:  MR
         R
Subjt:  MR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCTCCCTCAGCTTTTCTGTGGTACTCCTTTTAAGGGTCAAGCCAAAATCCTTCAAGCGAATGAGTCGTTCCCAAGGAATTGAGATCAAGGAGGATCATACTCCTCT
TGCTGTTGCAAGCAGGATCTCAAAGTTGATTGAAGAATCCTCTAAGGATAAGGTTGCAGTCAAAGACAACCCGCTGTTCGAATATGTCATTCCAACATCTAAGCAGCCAA
AGGATACATTAAATCCTGATGTGATGTTCGTCATGATGGCTGATGTAGACCAAGATGAAAGAATGACAGAGATGGAAAGAAAACTCAATCTCTTAATGAAGGCGGTTGAT
GAAAGAGATCTTGAGATTGCCTATTTGAAGAACCAGCTGATTCAATTCGGGACCCTTGATCCCGTAGTGGTTCGATGCCAAAAAGAAGCCACAATGAAGGGATCCCAAGG
AAAATATGATTCCATTGAAGATGAGAACGAAGGCTGGACCCTTGTCATTCGTCGCAAAAAGCAAAAGCAAAGCTATGCACGGAAAGAGTCCCGCATATTTCGAGATAGTA
AAAGAAAGGTTAAGTCTCAAAGGAAGAAAGGAAAAAAGAAGACAAGAAGGTCAAAGTCTGTCGTGGAGGAAAGTGAAGATTTCTTTTGCCCTCCACAACCCATAACTTTG
GCAGAATACTTCCCAAGATGCTTTCTCGATGATAGTCAAGGAGAGGCACTTGAAACTGTCACGTGTCACATTGTGGACGTGGTGGAAGATGATGACGTCCCTGCTAGCTC
CTCGGGAACGGTGGCAGGTCCAGGAGACTTATCCTCCTTTAGCATAAAGGATTTATTGTCACTTTCTCAGGAAGCTAAAAGTAATGAGAAACTCAATTTAGAACCACGAG
CTGATGCAAGAAAGGAAACTGTTGAAGATGTGGAGGCTTCTGACTTGAAAAAGGGTGAAACGTCTTCAAGCCTTGTGAAACCTAAAGTTGTAAAAGATGAGAAGTGTTCA
CCTGTCCTACAATACGTCCCTTTATCTCGGCGTAAAAAGGGTGAATCACCTTTCACTAAATGTCCAAAAAGCATAAAGAAGAAGCTTCTAAAAGAAGGTTATAGTTTTCC
TACAATAAGAAAAGGACTTGGATATAAGTCGCCTGAGCCGATTTGCATAACAAGAAAAGGGAAGGCGAAAGTGGCACACATAAATCATATAACAGTAGAGGAGGTTGATG
ACTCAAAAGAAAAAGAGAGCATCGACCAACGAACTTCTGTTTTTAGGCGCATCAGGTCACCAGTTGCTCGTGCTTCAGTCTTTCAGAGGTTAATTGTGAATGAAACAAAA
GAAGAAAGTGCACAACCTACCAATAACTCCACTCGATCTTCAGTTTTTCGAAGGTTAAGTATGTTCATTGAGGAAGAAGAGAGTATACTTTCAACTCCGGATGTCATGCG
ACCTTCACCTTTTCGAAGGTTAAATATGCCCGTTGGGGAAGAAGGGGGTACATTTTCAACTCCGAATGTGACTCGACCATCAGTTTTTCAAAGGTTAAGTGTTACCACGA
GAAGAGACAAAAAAGAGCAGTCTGCTTCGTCGACTTCTCACTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCCTCCCTCAGCTTTTCTGTGGTACTCCTTTTAAGGGTCAAGCCAAAATCCTTCAAGCGAATGAGTCGTTCCCAAGGAATTGAGATCAAGGAGGATCATACTCCTCT
TGCTGTTGCAAGCAGGATCTCAAAGTTGATTGAAGAATCCTCTAAGGATAAGGTTGCAGTCAAAGACAACCCGCTGTTCGAATATGTCATTCCAACATCTAAGCAGCCAA
AGGATACATTAAATCCTGATGTGATGTTCGTCATGATGGCTGATGTAGACCAAGATGAAAGAATGACAGAGATGGAAAGAAAACTCAATCTCTTAATGAAGGCGGTTGAT
GAAAGAGATCTTGAGATTGCCTATTTGAAGAACCAGCTGATTCAATTCGGGACCCTTGATCCCGTAGTGGTTCGATGCCAAAAAGAAGCCACAATGAAGGGATCCCAAGG
AAAATATGATTCCATTGAAGATGAGAACGAAGGCTGGACCCTTGTCATTCGTCGCAAAAAGCAAAAGCAAAGCTATGCACGGAAAGAGTCCCGCATATTTCGAGATAGTA
AAAGAAAGGTTAAGTCTCAAAGGAAGAAAGGAAAAAAGAAGACAAGAAGGTCAAAGTCTGTCGTGGAGGAAAGTGAAGATTTCTTTTGCCCTCCACAACCCATAACTTTG
GCAGAATACTTCCCAAGATGCTTTCTCGATGATAGTCAAGGAGAGGCACTTGAAACTGTCACGTGTCACATTGTGGACGTGGTGGAAGATGATGACGTCCCTGCTAGCTC
CTCGGGAACGGTGGCAGGTCCAGGAGACTTATCCTCCTTTAGCATAAAGGATTTATTGTCACTTTCTCAGGAAGCTAAAAGTAATGAGAAACTCAATTTAGAACCACGAG
CTGATGCAAGAAAGGAAACTGTTGAAGATGTGGAGGCTTCTGACTTGAAAAAGGGTGAAACGTCTTCAAGCCTTGTGAAACCTAAAGTTGTAAAAGATGAGAAGTGTTCA
CCTGTCCTACAATACGTCCCTTTATCTCGGCGTAAAAAGGGTGAATCACCTTTCACTAAATGTCCAAAAAGCATAAAGAAGAAGCTTCTAAAAGAAGGTTATAGTTTTCC
TACAATAAGAAAAGGACTTGGATATAAGTCGCCTGAGCCGATTTGCATAACAAGAAAAGGGAAGGCGAAAGTGGCACACATAAATCATATAACAGTAGAGGAGGTTGATG
ACTCAAAAGAAAAAGAGAGCATCGACCAACGAACTTCTGTTTTTAGGCGCATCAGGTCACCAGTTGCTCGTGCTTCAGTCTTTCAGAGGTTAATTGTGAATGAAACAAAA
GAAGAAAGTGCACAACCTACCAATAACTCCACTCGATCTTCAGTTTTTCGAAGGTTAAGTATGTTCATTGAGGAAGAAGAGAGTATACTTTCAACTCCGGATGTCATGCG
ACCTTCACCTTTTCGAAGGTTAAATATGCCCGTTGGGGAAGAAGGGGGTACATTTTCAACTCCGAATGTGACTCGACCATCAGTTTTTCAAAGGTTAAGTGTTACCACGA
GAAGAGACAAAAAAGAGCAGTCTGCTTCGTCGACTTCTCACTGA
Protein sequenceShow/hide protein sequence
MPSLSFSVVLLLRVKPKSFKRMSRSQGIEIKEDHTPLAVASRISKLIEESSKDKVAVKDNPLFEYVIPTSKQPKDTLNPDVMFVMMADVDQDERMTEMERKLNLLMKAVD
ERDLEIAYLKNQLIQFGTLDPVVVRCQKEATMKGSQGKYDSIEDENEGWTLVIRRKKQKQSYARKESRIFRDSKRKVKSQRKKGKKKTRRSKSVVEESEDFFCPPQPITL
AEYFPRCFLDDSQGEALETVTCHIVDVVEDDDVPASSSGTVAGPGDLSSFSIKDLLSLSQEAKSNEKLNLEPRADARKETVEDVEASDLKKGETSSSLVKPKVVKDEKCS
PVLQYVPLSRRKKGESPFTKCPKSIKKKLLKEGYSFPTIRKGLGYKSPEPICITRKGKAKVAHINHITVEEVDDSKEKESIDQRTSVFRRIRSPVARASVFQRLIVNETK
EESAQPTNNSTRSSVFRRLSMFIEEEESILSTPDVMRPSPFRRLNMPVGEEGGTFSTPNVTRPSVFQRLSVTTRRDKKEQSASSTSH