; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg005510 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg005510
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionPMD domain-containing protein
Genome locationscaffold7:25276015..25280750
RNA-Seq ExpressionSpg005510
SyntenySpg005510
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031667.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.4e-1728.35Show/hide
Query:  MVYFTEHLGPDKNCLVILKDRDQPVENGVILHVGEAVYGNFRTLQPSLDSSRVLSRWSEGRPLNQESSLKAWFLGSPIHNKASSQNPKSTLGRQTIE---
        MVYFT+        LV+  DR+QP E+ +   V +   G+F    P LD++ +L R S   PL+ E +  AW + S IHNKA + +   TLG++ IE   
Subjt:  MVYFTEHLGPDKNCLVILKDRDQPVENGVILHVGEAVYGNFRTLQPSLDSSRVLSRWSEGRPLNQESSLKAWFLGSPIHNKASSQNPKSTLGRQTIE---

Query:  -------------------------DVPNDLSEEV------------------------------------PEASLDNVLCFWMICVRAKTLSQVYLPAH
                                 D    L+  V                                    P  + DN+L  W IC R  TL ++YLP  
Subjt:  -------------------------DVPNDLSEEV------------------------------------PEASLDNVLCFWMICVRAKTLSQVYLPAH

Query:  AMKPHIQITQCYRSWWLAKNGNYFEEGIKKLVASASPLPPKPKFPKKVRDDNEGKTIRMFE
        +++P   +T  +  WW  + G Y ++ I  LV+S  P P +PK PK    +  GK IR+ E
Subjt:  AMKPHIQITQCYRSWWLAKNGNYFEEGIKKLVASASPLPPKPKFPKKVRDDNEGKTIRMFE

KAA0031751.1 hypothetical protein E6C27_scaffold506G00140 [Cucumis melo var. makuwa]1.2e-1640.98Show/hide
Query:  IHNKASSQNPKSTLGRQTIE--DVPNDLSEEVPEASLDNVLCFWMICVRAKTLSQVYLPAHAMKPHIQITQCYRSWWLAKNGNYFEEGIKKLVASASPLP
        IHN A  Q   S   R   E  D+PND+    P  +LDN+L  W IC R  TLS++YLP  +++P   +TQ +  WW  K+G YFE+    LV+S  P P
Subjt:  IHNKASSQNPKSTLGRQTIE--DVPNDLSEEVPEASLDNVLCFWMICVRAKTLSQVYLPAHAMKPHIQITQCYRSWWLAKNGNYFEEGIKKLVASASPLP

Query:  PKPKFPKKVRDDNEGKTIRMFE
         +P+ PK    +  GK IR+ E
Subjt:  PKPKFPKKVRDDNEGKTIRMFE

KAA0050733.1 uncharacterized protein E6C27_scaffold560G00370 [Cucumis melo var. makuwa]3.0e-1749.47Show/hide
Query:  EDVPNDLSEEVPEASLDNVLCFWMICVRAKTLSQVYLPAHAMKPHIQITQCYRSWWLAKNGNYFEEGIKKLVASASPLPPKPKFPKKVRDDNEGK
        +DVP DLSE++P+A+L NV   WMICVR  TLSQVYLPA  + P   IT  Y++WWLAK+G+Y +EG++ L+   +P   K K  KK+  + + K
Subjt:  EDVPNDLSEEVPEASLDNVLCFWMICVRAKTLSQVYLPAHAMKPHIQITQCYRSWWLAKNGNYFEEGIKKLVASASPLPPKPKFPKKVRDDNEGK

KAA0050733.1 uncharacterized protein E6C27_scaffold560G00370 [Cucumis melo var. makuwa]5.4e-1442.86Show/hide
Query:  MVYFTEHLGPDKNCLVILKDRDQPVENGVILHVGEAVYGNFRTLQPSLDSSRVLSRWSEGRPLNQESSLKAWFLGSPIHNKASSQNPKSTLGRQTIED
        MVYFTE+    K CL+ILKD +Q +++G++L V +  + N    Q   ++  +L +WS+ + +N  S L +WFL S IHNK  ++NP+STLG Q I D
Subjt:  MVYFTEHLGPDKNCLVILKDRDQPVENGVILHVGEAVYGNFRTLQPSLDSSRVLSRWSEGRPLNQESSLKAWFLGSPIHNKASSQNPKSTLGRQTIED

KAA0050733.1 uncharacterized protein E6C27_scaffold560G00370 [Cucumis melo var. makuwa]1.2e-1644Show/hide
Query:  DVPNDLSEEVPEASLDNVLCFWMICVRAKTLSQVYLPAHAMKPHIQITQCYRSWWLAKNGNYFEEGIKKLVASASPLPPKPKFPKKVRDDNEGKTIRMFE
        D+PND+    P  +LDN+L  W IC+R  TLS++YLPA +++P   +TQ +  WW  K+G YFE+    LV+SA P P +P+ PK    +  GK IR+ E
Subjt:  DVPNDLSEEVPEASLDNVLCFWMICVRAKTLSQVYLPAHAMKPHIQITQCYRSWWLAKNGNYFEEGIKKLVASASPLPPKPKFPKKVRDDNEGKTIRMFE

KAA0053466.1 hypothetical protein E6C27_scaffold190G00140 [Cucumis melo var. makuwa]2.0e-1638.81Show/hide
Query:  SLKAWFLGSPIHNK--ASSQNPKSTLGRQ--TIEDVPNDLSEEVPEASLDNVLCFWMICVRAKTLSQVYLPAHAMKPHIQITQCYRSWWLAKNGNYFEEG
        S+++ +L S   N    +S +P    GRQ    +D+PND+    P  +LDN+L  W IC+R  TLS++YLP  +++P   +TQ +  WW  K+ NYFE+ 
Subjt:  SLKAWFLGSPIHNK--ASSQNPKSTLGRQ--TIEDVPNDLSEEVPEASLDNVLCFWMICVRAKTLSQVYLPAHAMKPHIQITQCYRSWWLAKNGNYFEEG

Query:  IKKLVASASPLPPKPKFPKKVRDDNEGKTIRMFE
           LV+SA P P +P+ PK    +  GK IR+ E
Subjt:  IKKLVASASPLPPKPKFPKKVRDDNEGKTIRMFE

TrEMBL top hitse value%identityAlignment
A0A5A7U4C3 Uncharacterized protein1.5e-1749.47Show/hide
Query:  EDVPNDLSEEVPEASLDNVLCFWMICVRAKTLSQVYLPAHAMKPHIQITQCYRSWWLAKNGNYFEEGIKKLVASASPLPPKPKFPKKVRDDNEGK
        +DVP DLSE++P+A+L NV   WMICVR  TLSQVYLPA  + P   IT  Y++WWLAK+G+Y +EG++ L+   +P   K K  KK+  + + K
Subjt:  EDVPNDLSEEVPEASLDNVLCFWMICVRAKTLSQVYLPAHAMKPHIQITQCYRSWWLAKNGNYFEEGIKKLVASASPLPPKPKFPKKVRDDNEGK

A0A5A7U4C3 Uncharacterized protein2.6e-1442.86Show/hide
Query:  MVYFTEHLGPDKNCLVILKDRDQPVENGVILHVGEAVYGNFRTLQPSLDSSRVLSRWSEGRPLNQESSLKAWFLGSPIHNKASSQNPKSTLGRQTIED
        MVYFTE+    K CL+ILKD +Q +++G++L V +  + N    Q   ++  +L +WS+ + +N  S L +WFL S IHNK  ++NP+STLG Q I D
Subjt:  MVYFTEHLGPDKNCLVILKDRDQPVENGVILHVGEAVYGNFRTLQPSLDSSRVLSRWSEGRPLNQESSLKAWFLGSPIHNKASSQNPKSTLGRQTIED

A0A5A7U4C3 Uncharacterized protein5.6e-1740.98Show/hide
Query:  IHNKASSQNPKSTLGRQTIE--DVPNDLSEEVPEASLDNVLCFWMICVRAKTLSQVYLPAHAMKPHIQITQCYRSWWLAKNGNYFEEGIKKLVASASPLP
        IHN A  Q   S   R   E  D+PND+    P  +LDN+L  W IC R  TLS++YLP  +++P   +TQ +  WW  K+G YFE+    LV+S  P P
Subjt:  IHNKASSQNPKSTLGRQTIE--DVPNDLSEEVPEASLDNVLCFWMICVRAKTLSQVYLPAHAMKPHIQITQCYRSWWLAKNGNYFEEGIKKLVASASPLP

Query:  PKPKFPKKVRDDNEGKTIRMFE
         +P+ PK    +  GK IR+ E
Subjt:  PKPKFPKKVRDDNEGKTIRMFE

A0A5A7UGA8 Uncharacterized protein1.2e-1638.81Show/hide
Query:  SLKAWFLGSPIHNK--ASSQNPKSTLGRQ--TIEDVPNDLSEEVPEASLDNVLCFWMICVRAKTLSQVYLPAHAMKPHIQITQCYRSWWLAKNGNYFEEG
        S+++ +L S   N    +S NP    GRQ    +D+PN +    P  +L+N+L  W IC R  TLS++YLPAH+++P   +TQ +  WW  K+G YFE+ 
Subjt:  SLKAWFLGSPIHNK--ASSQNPKSTLGRQ--TIEDVPNDLSEEVPEASLDNVLCFWMICVRAKTLSQVYLPAHAMKPHIQITQCYRSWWLAKNGNYFEEG

Query:  IKKLVASASPLPPKPKFPKKVRDDNEGKTIRMFE
           LV+S  P P +P+ PK    +  GK IR+ E
Subjt:  IKKLVASASPLPPKPKFPKKVRDDNEGKTIRMFE

A0A5A7UGW6 PMD domain-containing protein9.6e-1738.81Show/hide
Query:  SLKAWFLGSPIHNK--ASSQNPKSTLGRQ--TIEDVPNDLSEEVPEASLDNVLCFWMICVRAKTLSQVYLPAHAMKPHIQITQCYRSWWLAKNGNYFEEG
        S+++ +L S   N    +S +P    GRQ    +D+PND+    P  +LDN+L  W IC+R  TLS++YLP  +++P   +TQ +  WW  K+ NYFE+ 
Subjt:  SLKAWFLGSPIHNK--ASSQNPKSTLGRQ--TIEDVPNDLSEEVPEASLDNVLCFWMICVRAKTLSQVYLPAHAMKPHIQITQCYRSWWLAKNGNYFEEG

Query:  IKKLVASASPLPPKPKFPKKVRDDNEGKTIRMFE
           LV+SA P P +P+ PK    +  GK IR+ E
Subjt:  IKKLVASASPLPPKPKFPKKVRDDNEGKTIRMFE

A0A5A7UVI5 PMD domain-containing protein5.6e-1744Show/hide
Query:  DVPNDLSEEVPEASLDNVLCFWMICVRAKTLSQVYLPAHAMKPHIQITQCYRSWWLAKNGNYFEEGIKKLVASASPLPPKPKFPKKVRDDNEGKTIRMFE
        D+PND+    P  +LDN+L  W IC+R  TLS++YLPA +++P   +TQ +  WW  K+G YFE+    LV+SA P P +P+ PK    +  GK IR+ E
Subjt:  DVPNDLSEEVPEASLDNVLCFWMICVRAKTLSQVYLPAHAMKPHIQITQCYRSWWLAKNGNYFEEGIKKLVASASPLPPKPKFPKKVRDDNEGKTIRMFE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTGTCAGAGTTACTCCTGGTTCTTCGGATGGTTGGAGTTCGCGGTGGCGGTGGGCGTCGGATCGGGATTGGGTTAGTGGCGGAGTTCGTCGGAGTGGCAGAGTTCG
TCAGAGTGGCGGCGACGTAGCTCTTCAACGGCAACGACGATGTGAGAAACTTATCTCCAGCATGGTGTATTTCACTGAGCATCTTGGTCCTGATAAAAATTGCTTAGTCA
TCTTGAAAGATAGAGATCAACCTGTTGAAAATGGAGTCATTCTTCATGTAGGAGAGGCGGTGTATGGAAACTTTAGGACATTGCAGCCTTCCTTAGATAGTTCTAGAGTT
CTATCTAGATGGTCTGAAGGGAGGCCCTTGAATCAAGAATCATCGCTGAAAGCGTGGTTCCTAGGATCTCCAATACATAATAAAGCATCAAGTCAGAATCCAAAATCGAC
GCTAGGTCGTCAAACTATTGAGGACGTACCAAACGATCTAAGTGAAGAAGTTCCTGAGGCCAGCTTAGATAATGTATTGTGCTTTTGGATGATATGTGTTCGAGCAAAAA
CATTGTCTCAAGTTTATCTCCCTGCACATGCGATGAAGCCACACATTCAAATTACTCAATGTTACCGGAGTTGGTGGTTGGCAAAAAATGGAAATTATTTTGAAGAAGGC
ATAAAAAAGTTGGTGGCTAGCGCTAGTCCTCTTCCTCCCAAGCCTAAATTTCCCAAAAAGGTTCGTGATGACAACGAAGGTAAAACGATTCGCATGTTTGAACCCGGTGA
GTTTCATTCTAAGGATAATGATGGTAGTAAAGGGTTAAAATCCCTTACGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTGTGTCAGAGTTACTCCTGGTTCTTCGGATGGTTGGAGTTCGCGGTGGCGGTGGGCGTCGGATCGGGATTGGGTTAGTGGCGGAGTTCGTCGGAGTGGCAGAGTTCG
TCAGAGTGGCGGCGACGTAGCTCTTCAACGGCAACGACGATGTGAGAAACTTATCTCCAGCATGGTGTATTTCACTGAGCATCTTGGTCCTGATAAAAATTGCTTAGTCA
TCTTGAAAGATAGAGATCAACCTGTTGAAAATGGAGTCATTCTTCATGTAGGAGAGGCGGTGTATGGAAACTTTAGGACATTGCAGCCTTCCTTAGATAGTTCTAGAGTT
CTATCTAGATGGTCTGAAGGGAGGCCCTTGAATCAAGAATCATCGCTGAAAGCGTGGTTCCTAGGATCTCCAATACATAATAAAGCATCAAGTCAGAATCCAAAATCGAC
GCTAGGTCGTCAAACTATTGAGGACGTACCAAACGATCTAAGTGAAGAAGTTCCTGAGGCCAGCTTAGATAATGTATTGTGCTTTTGGATGATATGTGTTCGAGCAAAAA
CATTGTCTCAAGTTTATCTCCCTGCACATGCGATGAAGCCACACATTCAAATTACTCAATGTTACCGGAGTTGGTGGTTGGCAAAAAATGGAAATTATTTTGAAGAAGGC
ATAAAAAAGTTGGTGGCTAGCGCTAGTCCTCTTCCTCCCAAGCCTAAATTTCCCAAAAAGGTTCGTGATGACAACGAAGGTAAAACGATTCGCATGTTTGAACCCGGTGA
GTTTCATTCTAAGGATAATGATGGTAGTAAAGGGTTAAAATCCCTTACGTAG
Protein sequenceShow/hide protein sequence
MCVRVTPGSSDGWSSRWRWASDRDWVSGGVRRSGRVRQSGGDVALQRQRRCEKLISSMVYFTEHLGPDKNCLVILKDRDQPVENGVILHVGEAVYGNFRTLQPSLDSSRV
LSRWSEGRPLNQESSLKAWFLGSPIHNKASSQNPKSTLGRQTIEDVPNDLSEEVPEASLDNVLCFWMICVRAKTLSQVYLPAHAMKPHIQITQCYRSWWLAKNGNYFEEG
IKKLVASASPLPPKPKFPKKVRDDNEGKTIRMFEPGEFHSKDNDGSKGLKSLT