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Spg005523 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg005523
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold7:25253794..25264379
RNA-Seq ExpressionSpg005523
SyntenySpg005523
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044237 - cellular metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
GO:0004518 - nuclease activity (molecular function)
GO:0004722 - protein serine/threonine phosphatase activity (molecular function)
GO:0043169 - cation binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAV67983.1 hypothetical protein CFOL_v3_11486 [Cephalotus follicularis]6.7e-1142.53Show/hide
Query:  AEAQLEDVLQEEELYWKQQSREVWLKEGDQNTRWFHRQASYRQRLNRIVGLTDDQGEWRQDKAMILQTLSAGLSLVWFEALHLSNGP
        A  +L DVL+ EE+ W+Q+SR  WLK+GD NT++FH  AS R+R NRI+G+ D+ G W++D+ +  + +S      +F ++ LS+ P
Subjt:  AEAQLEDVLQEEELYWKQQSREVWLKEGDQNTRWFHRQASYRQRLNRIVGLTDDQGEWRQDKAMILQTLSAGLSLVWFEALHLSNGP

PON63356.1 Endonuclease/exonuclease/phosphatase [Parasponia andersonii]1.3e-1137.38Show/hide
Query:  SEMSMTDVHAEAQLEDVLQEEELYWKQQSREVWLKEGDQNTRWFHRQASYRQRLNRIVGLTDDQGEWRQDKAMILQTLSAGLSLVWFEALHLSNGPTFLL
        S M   + + E +LED+L +EE+YW+Q+S+  WLK GDQNT +FH++AS R++ N+I  L D  GEW++DK  + Q      S ++  +L      + +L
Subjt:  SEMSMTDVHAEAQLEDVLQEEELYWKQQSREVWLKEGDQNTRWFHRQASYRQRLNRIVGLTDDQGEWRQDKAMILQTLSAGLSLVWFEALHLSNGPTFLL

Query:  ETEKDRL
           + R+
Subjt:  ETEKDRL

XP_006487889.1 uncharacterized protein LOC102617714 [Citrus sinensis]6.7e-1155Show/hide
Query:  EAQLEDVLQEEELYWKQQSREVWLKEGDQNTRWFHRQASYRQRLNRIVGLTDDQGEWRQD
        E Q++++LQ+EE++WKQ+SR  WLKEGD+NT++FH +AS R++ NRI G+ D+QG+W +D
Subjt:  EAQLEDVLQEEELYWKQQSREVWLKEGDQNTRWFHRQASYRQRLNRIVGLTDDQGEWRQD

XP_015382226.1 uncharacterized protein LOC107175329, partial [Citrus sinensis]6.7e-1155Show/hide
Query:  EAQLEDVLQEEELYWKQQSREVWLKEGDQNTRWFHRQASYRQRLNRIVGLTDDQGEWRQD
        E Q++++LQ+EE++WKQ+SR  WLKEGD+NT++FH +AS R++ NRI G+ D+QG+W +D
Subjt:  EAQLEDVLQEEELYWKQQSREVWLKEGDQNTRWFHRQASYRQRLNRIVGLTDDQGEWRQD

XP_022150918.1 uncharacterized protein LOC111018954 [Momordica charantia]1.5e-1040.91Show/hide
Query:  AEAQLEDVLQEEELYWKQQSREVWLKEGDQNTRWFHRQASYRQRLNRIVGLTDDQGEWRQDKAMILQTLSAGLSLVWFEALHLSNGPT
        A   +  +L+EEE++W+Q+SR++W K GD+NT+WFH +AS+R+R N I GL D QG W ++K  ++     G+   +F  L  S+ P+
Subjt:  AEAQLEDVLQEEELYWKQQSREVWLKEGDQNTRWFHRQASYRQRLNRIVGLTDDQGEWRQDKAMILQTLSAGLSLVWFEALHLSNGPT

TrEMBL top hitse value%identityAlignment
A0A1Q3BJS4 Uncharacterized protein3.2e-1142.53Show/hide
Query:  AEAQLEDVLQEEELYWKQQSREVWLKEGDQNTRWFHRQASYRQRLNRIVGLTDDQGEWRQDKAMILQTLSAGLSLVWFEALHLSNGP
        A  +L DVL+ EE+ W+Q+SR  WLK+GD NT++FH  AS R+R NRI+G+ D+ G W++D+ +  + +S      +F ++ LS+ P
Subjt:  AEAQLEDVLQEEELYWKQQSREVWLKEGDQNTRWFHRQASYRQRLNRIVGLTDDQGEWRQDKAMILQTLSAGLSLVWFEALHLSNGP

A0A2N9EDY7 Reverse transcriptase domain-containing protein7.2e-1144.19Show/hide
Query:  EAQLEDVLQEEELYWKQQSREVWLKEGDQNTRWFHRQASYRQRLNRIVGLTDDQGEWRQDKAMILQTLSAGLSLVWFEALHLSNGP
        ++++  +L++EE  W+Q+SR  WL+EGD+NTR+FH +AS R+R NRI+GL DDQG WR++K+        GL +  FE++  ++ P
Subjt:  EAQLEDVLQEEELYWKQQSREVWLKEGDQNTRWFHRQASYRQRLNRIVGLTDDQGEWRQDKAMILQTLSAGLSLVWFEALHLSNGP

A0A2N9ES30 Reverse transcriptase domain-containing protein7.2e-1144.19Show/hide
Query:  EAQLEDVLQEEELYWKQQSREVWLKEGDQNTRWFHRQASYRQRLNRIVGLTDDQGEWRQDKAMILQTLSAGLSLVWFEALHLSNGP
        ++++  +L++EE  W+Q+SR  WL+EGD+NTR+FH +AS R+R NRI+GL DDQG WR++K+        GL +  FE++  ++ P
Subjt:  EAQLEDVLQEEELYWKQQSREVWLKEGDQNTRWFHRQASYRQRLNRIVGLTDDQGEWRQDKAMILQTLSAGLSLVWFEALHLSNGP

A0A2P5CQS5 Endonuclease/exonuclease/phosphatase6.5e-1237.38Show/hide
Query:  SEMSMTDVHAEAQLEDVLQEEELYWKQQSREVWLKEGDQNTRWFHRQASYRQRLNRIVGLTDDQGEWRQDKAMILQTLSAGLSLVWFEALHLSNGPTFLL
        S M   + + E +LED+L +EE+YW+Q+S+  WLK GDQNT +FH++AS R++ N+I  L D  GEW++DK  + Q      S ++  +L      + +L
Subjt:  SEMSMTDVHAEAQLEDVLQEEELYWKQQSREVWLKEGDQNTRWFHRQASYRQRLNRIVGLTDDQGEWRQDKAMILQTLSAGLSLVWFEALHLSNGPTFLL

Query:  ETEKDRL
           + R+
Subjt:  ETEKDRL

A0A6J1DAR4 uncharacterized protein LOC1110189547.2e-1140.91Show/hide
Query:  AEAQLEDVLQEEELYWKQQSREVWLKEGDQNTRWFHRQASYRQRLNRIVGLTDDQGEWRQDKAMILQTLSAGLSLVWFEALHLSNGPT
        A   +  +L+EEE++W+Q+SR++W K GD+NT+WFH +AS+R+R N I GL D QG W ++K  ++     G+   +F  L  S+ P+
Subjt:  AEAQLEDVLQEEELYWKQQSREVWLKEGDQNTRWFHRQASYRQRLNRIVGLTDDQGEWRQDKAMILQTLSAGLSLVWFEALHLSNGPT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATGCCTTTCATCCCACCCCAGGGGTCCTATATATAGAATATTTCTGTGTCCACGGATATCGACCAATACTACAAGTCAGTCCTTCACGTGTGTTCCTCGGATTGC
TGTAATCGGGACCTCGGCTGTCCCATTTCGGCGCGTTGTTGCTAGTGTTCCGGAGGAGGGTGGTAGGAAACCAGATAGTCAGGGGGGCCGAGGAGCAGGCATATCTGATC
CAGTTGTTGAACTGGTGGCAGATCCGGTGGTTGAACCGGTGGCTGATTTTGAGTTGGCTACGGAGTCCTCGACTCCTTCAATTACTACCCATACAGCTCCTCTTGTTACT
AGGGTGGCTTCTGCAGGAAAAGGTAAGGCTGTGGCTAATGAGAACTCTGAGATGTCTATGACTGATGTGCACGCTGAAGCCCAGTTGGAAGATGTATTACAGGAGGAGGA
GCTATACTGGAAACAGCAATCTAGAGAGGTGTGGTTAAAGGAAGGGGATCAAAATACTCGGTGGTTTCATCGTCAAGCATCGTATCGACAAAGGCTCAATCGTATTGTGG
GCCTCACGGATGATCAGGGAGAATGGCGCCAGGACAAAGCTATGATTCTTCAGACGTTGTCAGCCGGCTTGAGTCTTGTTTGGTTTGAGGCCTTGCATCTGAGCAATGGA
CCTACTTTCCTTTTGGAAACAGAGAAAGATAGACTTGAAGGTCTAGGTCTGCTTTATGGGATTCATAAACCTGTTGTCACCCCGATAGGGGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGATGCCTTTCATCCCACCCCAGGGGTCCTATATATAGAATATTTCTGTGTCCACGGATATCGACCAATACTACAAGTCAGTCCTTCACGTGTGTTCCTCGGATTGC
TGTAATCGGGACCTCGGCTGTCCCATTTCGGCGCGTTGTTGCTAGTGTTCCGGAGGAGGGTGGTAGGAAACCAGATAGTCAGGGGGGCCGAGGAGCAGGCATATCTGATC
CAGTTGTTGAACTGGTGGCAGATCCGGTGGTTGAACCGGTGGCTGATTTTGAGTTGGCTACGGAGTCCTCGACTCCTTCAATTACTACCCATACAGCTCCTCTTGTTACT
AGGGTGGCTTCTGCAGGAAAAGGTAAGGCTGTGGCTAATGAGAACTCTGAGATGTCTATGACTGATGTGCACGCTGAAGCCCAGTTGGAAGATGTATTACAGGAGGAGGA
GCTATACTGGAAACAGCAATCTAGAGAGGTGTGGTTAAAGGAAGGGGATCAAAATACTCGGTGGTTTCATCGTCAAGCATCGTATCGACAAAGGCTCAATCGTATTGTGG
GCCTCACGGATGATCAGGGAGAATGGCGCCAGGACAAAGCTATGATTCTTCAGACGTTGTCAGCCGGCTTGAGTCTTGTTTGGTTTGAGGCCTTGCATCTGAGCAATGGA
CCTACTTTCCTTTTGGAAACAGAGAAAGATAGACTTGAAGGTCTAGGTCTGCTTTATGGGATTCATAAACCTGTTGTCACCCCGATAGGGGCTTGA
Protein sequenceShow/hide protein sequence
MGCLSSHPRGPIYRIFLCPRISTNTTSQSFTCVPRIAVIGTSAVPFRRVVASVPEEGGRKPDSQGGRGAGISDPVVELVADPVVEPVADFELATESSTPSITTHTAPLVT
RVASAGKGKAVANENSEMSMTDVHAEAQLEDVLQEEELYWKQQSREVWLKEGDQNTRWFHRQASYRQRLNRIVGLTDDQGEWRQDKAMILQTLSAGLSLVWFEALHLSNG
PTFLLETEKDRLEGLGLLYGIHKPVVTPIGA