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Spg005554 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg005554
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionPlant transposase
Genome locationscaffold7:26232205..26232761
RNA-Seq ExpressionSpg005554
SyntenySpg005554
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038435.1 Plant transposase [Cucumis melo var. makuwa]5.1e-1959.57Show/hide
Query:  MECIEQTDIEIITSPNNVVEDELSKVLGPDRGHVRGFGFGVTRTILSLLSQRDNKVTMLEKEYLRMKE----------KMMEMESFMTCFIKKQ
        +E IEQT+ E   S  NVV+D LSKVLGPDRGHVRGFGFGVTR+ LSLLSQ+D+K  +LEKEYL+MKE          +M+EM++ M  ++KKQ
Subjt:  MECIEQTDIEIITSPNNVVEDELSKVLGPDRGHVRGFGFGVTRTILSLLSQRDNKVTMLEKEYLRMKE----------KMMEMESFMTCFIKKQ

KAA0054504.1 putative TNP1-like transposon protein [Cucumis melo var. makuwa]1.3e-1960.64Show/hide
Query:  MECIEQTDIEIITSPNNVVEDELSKVLGPDRGHVRGFGFGVTRTILSLLSQRDNKVTMLEKEYLRMKE----------KMMEMESFMTCFIKKQ
        +E IEQT+ E I S  NVV+D LSKVLGPDRGHVRGFGFGVTR+ LSLLSQ+D+K  +LEKEYL+MKE          +M+EM++ M  ++KKQ
Subjt:  MECIEQTDIEIITSPNNVVEDELSKVLGPDRGHVRGFGFGVTRTILSLLSQRDNKVTMLEKEYLRMKE----------KMMEMESFMTCFIKKQ

KAA0066537.1 Plant transposase [Cucumis melo var. makuwa]5.1e-1959.57Show/hide
Query:  MECIEQTDIEIITSPNNVVEDELSKVLGPDRGHVRGFGFGVTRTILSLLSQRDNKVTMLEKEYLRMKE----------KMMEMESFMTCFIKKQ
        +E IEQT+ E   S  NVV+D LSKVLGPDRGHVRGFGFGVTR+ LSLLSQ+D+K  +LEKEYL+MKE          +M+EM++ M  ++KKQ
Subjt:  MECIEQTDIEIITSPNNVVEDELSKVLGPDRGHVRGFGFGVTRTILSLLSQRDNKVTMLEKEYLRMKE----------KMMEMESFMTCFIKKQ

TYK13531.1 putative TNP1-like transposon protein [Cucumis melo var. makuwa]5.1e-1959.57Show/hide
Query:  MECIEQTDIEIITSPNNVVEDELSKVLGPDRGHVRGFGFGVTRTILSLLSQRDNKVTMLEKEYLRMKE----------KMMEMESFMTCFIKKQ
        +E IEQT+ E   S  NVV+D LSKVLGPDRGHVRGFGFGVTR+ LSLLSQ+D+K  +LEKEYL+MKE          +M+EM++ M  ++KKQ
Subjt:  MECIEQTDIEIITSPNNVVEDELSKVLGPDRGHVRGFGFGVTRTILSLLSQRDNKVTMLEKEYLRMKE----------KMMEMESFMTCFIKKQ

TYK25923.1 Plant transposase [Cucumis melo var. makuwa]5.1e-1959.57Show/hide
Query:  MECIEQTDIEIITSPNNVVEDELSKVLGPDRGHVRGFGFGVTRTILSLLSQRDNKVTMLEKEYLRMKE----------KMMEMESFMTCFIKKQ
        +E IEQT+ E   S  NVV+D LSKVLGPDRGHVRGFGFGVTR+ LSLLSQ+D+K  +LEKEYL+MKE          +M+EM++ M  ++KKQ
Subjt:  MECIEQTDIEIITSPNNVVEDELSKVLGPDRGHVRGFGFGVTRTILSLLSQRDNKVTMLEKEYLRMKE----------KMMEMESFMTCFIKKQ

TrEMBL top hitse value%identityAlignment
A0A5A7TAN8 Plant transposase2.5e-1959.57Show/hide
Query:  MECIEQTDIEIITSPNNVVEDELSKVLGPDRGHVRGFGFGVTRTILSLLSQRDNKVTMLEKEYLRMKE----------KMMEMESFMTCFIKKQ
        +E IEQT+ E   S  NVV+D LSKVLGPDRGHVRGFGFGVTR+ LSLLSQ+D+K  +LEKEYL+MKE          +M+EM++ M  ++KKQ
Subjt:  MECIEQTDIEIITSPNNVVEDELSKVLGPDRGHVRGFGFGVTRTILSLLSQRDNKVTMLEKEYLRMKE----------KMMEMESFMTCFIKKQ

A0A5A7UH86 Putative TNP1-like transposon protein6.5e-2060.64Show/hide
Query:  MECIEQTDIEIITSPNNVVEDELSKVLGPDRGHVRGFGFGVTRTILSLLSQRDNKVTMLEKEYLRMKE----------KMMEMESFMTCFIKKQ
        +E IEQT+ E I S  NVV+D LSKVLGPDRGHVRGFGFGVTR+ LSLLSQ+D+K  +LEKEYL+MKE          +M+EM++ M  ++KKQ
Subjt:  MECIEQTDIEIITSPNNVVEDELSKVLGPDRGHVRGFGFGVTRTILSLLSQRDNKVTMLEKEYLRMKE----------KMMEMESFMTCFIKKQ

A0A5A7VHH9 Plant transposase2.5e-1959.57Show/hide
Query:  MECIEQTDIEIITSPNNVVEDELSKVLGPDRGHVRGFGFGVTRTILSLLSQRDNKVTMLEKEYLRMKE----------KMMEMESFMTCFIKKQ
        +E IEQT+ E   S  NVV+D LSKVLGPDRGHVRGFGFGVTR+ LSLLSQ+D+K  +LEKEYL+MKE          +M+EM++ M  ++KKQ
Subjt:  MECIEQTDIEIITSPNNVVEDELSKVLGPDRGHVRGFGFGVTRTILSLLSQRDNKVTMLEKEYLRMKE----------KMMEMESFMTCFIKKQ

A0A5D3CNY4 Putative TNP1-like transposon protein2.5e-1959.57Show/hide
Query:  MECIEQTDIEIITSPNNVVEDELSKVLGPDRGHVRGFGFGVTRTILSLLSQRDNKVTMLEKEYLRMKE----------KMMEMESFMTCFIKKQ
        +E IEQT+ E   S  NVV+D LSKVLGPDRGHVRGFGFGVTR+ LSLLSQ+D+K  +LEKEYL+MKE          +M+EM++ M  ++KKQ
Subjt:  MECIEQTDIEIITSPNNVVEDELSKVLGPDRGHVRGFGFGVTRTILSLLSQRDNKVTMLEKEYLRMKE----------KMMEMESFMTCFIKKQ

A0A5D3DQI7 Plant transposase2.5e-1959.57Show/hide
Query:  MECIEQTDIEIITSPNNVVEDELSKVLGPDRGHVRGFGFGVTRTILSLLSQRDNKVTMLEKEYLRMKE----------KMMEMESFMTCFIKKQ
        +E IEQT+ E   S  NVV+D LSKVLGPDRGHVRGFGFGVTR+ LSLLSQ+D+K  +LEKEYL+MKE          +M+EM++ M  ++KKQ
Subjt:  MECIEQTDIEIITSPNNVVEDELSKVLGPDRGHVRGFGFGVTRTILSLLSQRDNKVTMLEKEYLRMKE----------KMMEMESFMTCFIKKQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATGTATTGAACAAACTGATATTGAGATAATAACTTCTCCAAATAACGTGGTTGAGGATGAATTGAGTAAAGTTCTTGGTCCTGATCGTGGGCACGTAAGAGGATT
TGGATTTGGTGTGACTCGTACAATATTATCTCTTCTTTCGCAACGAGATAACAAGGTCACAATGCTTGAAAAAGAATATTTAAGGATGAAGGAGAAAATGATGGAAATGG
AATCATTCATGACATGTTTTATTAAAAAGCAGGTAAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAATGTATTGAACAAACTGATATTGAGATAATAACTTCTCCAAATAACGTGGTTGAGGATGAATTGAGTAAAGTTCTTGGTCCTGATCGTGGGCACGTAAGAGGATT
TGGATTTGGTGTGACTCGTACAATATTATCTCTTCTTTCGCAACGAGATAACAAGGTCACAATGCTTGAAAAAGAATATTTAAGGATGAAGGAGAAAATGATGGAAATGG
AATCATTCATGACATGTTTTATTAAAAAGCAGGTAAATTAA
Protein sequenceShow/hide protein sequence
MECIEQTDIEIITSPNNVVEDELSKVLGPDRGHVRGFGFGVTRTILSLLSQRDNKVTMLEKEYLRMKEKMMEMESFMTCFIKKQVN