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Spg005557 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg005557
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionprotein CHROMATIN REMODELING 19
Genome locationscaffold7:26874661..26890429
RNA-Seq ExpressionSpg005557
SyntenySpg005557
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600793.1 Protein CHROMATIN REMODELING 19, partial [Cucurbita argyrosperma subsp. sororia]2.3e-1348.6Show/hide
Query:  EDDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYRKGVGGVQKVLLNEEREDGQPL-TVGWMFSISFSINTLNDGASCNFFCSLSLEDTWLGKSPR-CSR
        +DDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYRKGVGG    +L +E   G+ +  + ++  + +     ND       C  S+ + W  +  + C  
Subjt:  EDDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYRKGVGGVQKVLLNEEREDGQPL-TVGWMFSISFSINTLNDGASCNFFCSLSLEDTWLGKSPR-CSR

Query:  FPCL-YH
        F  L YH
Subjt:  FPCL-YH
KAG7031433.1 Protein CHROMATIN REMODELING 19 [Cucurbita argyrosperma subsp. argyrosperma]2.2e-1650.44Show/hide
Query:  MKVKTLEDDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYRKGVGGVQKVLLNEEREDGQPL-TVGWMFSISFSINTLNDGASCNFFCSLSLEDTWLGKS
        M++KTLEDDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYRKGVGG    +L +E   G+ +  + ++  + +     ND       C  S+ + W  + 
Subjt:  MKVKTLEDDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYRKGVGGVQKVLLNEEREDGQPL-TVGWMFSISFSINTLNDGASCNFFCSLSLEDTWLGKS

Query:  PR-CSRFPCL-YH
         + C  F  L YH
Subjt:  PR-CSRFPCL-YH
XP_022943065.1 protein CHROMATIN REMODELING 19 [Cucurbita moschata]2.3e-1348.6Show/hide
Query:  EDDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYRKGVGGVQKVLLNEEREDGQPL-TVGWMFSISFSINTLNDGASCNFFCSLSLEDTWLGKSPR-CSR
        +DDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYRKGVGG    +L +E   G+ +  + ++  + +     ND       C  S+ + W  +  + C  
Subjt:  EDDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYRKGVGGVQKVLLNEEREDGQPL-TVGWMFSISFSINTLNDGASCNFFCSLSLEDTWLGKSPR-CSR

Query:  FPCL-YH
        F  L YH
Subjt:  FPCL-YH
XP_022991239.1 protein CHROMATIN REMODELING 19 [Cucurbita maxima]2.3e-1348.6Show/hide
Query:  EDDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYRKGVGGVQKVLLNEEREDGQPL-TVGWMFSISFSINTLNDGASCNFFCSLSLEDTWLGKSPR-CSR
        +DDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYRKGVGG    +L +E   G+ +  + ++  + +     ND       C  S+ + W  +  + C  
Subjt:  EDDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYRKGVGGVQKVLLNEEREDGQPL-TVGWMFSISFSINTLNDGASCNFFCSLSLEDTWLGKSPR-CSR

Query:  FPCL-YH
        F  L YH
Subjt:  FPCL-YH
XP_023545956.1 LOW QUALITY PROTEIN: protein CHROMATIN REMODELING 19 [Cucurbita pepo subsp. pepo]2.3e-1348.6Show/hide
Query:  EDDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYRKGVGGVQKVLLNEEREDGQPL-TVGWMFSISFSINTLNDGASCNFFCSLSLEDTWLGKSPR-CSR
        +DDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYRKGVGG    +L +E   G+ +  + ++  + +     ND       C  S+ + W  +  + C  
Subjt:  EDDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYRKGVGGVQKVLLNEEREDGQPL-TVGWMFSISFSINTLNDGASCNFFCSLSLEDTWLGKSPR-CSR

Query:  FPCL-YH
        F  L YH
Subjt:  FPCL-YH
TrEMBL top hitse value%identityAlignment
A0A1S3CC04 protein CHROMATIN REMODELING 19 isoform X19.4e-1345.45Show/hide
Query:  EDDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYRKGVGGVQKVLLNEEREDGQPLTVGWMFSISFSINTLNDGASCNFFCSLSLEDTWLGKSPR-CSRF
        +DDINAACK EDSDFEPVLKPYQLVGVNFLLLLY+KGVGG    +L +E   G+ +       +   +N  ND       C  S+ + W  +  + C  F
Subjt:  EDDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYRKGVGGVQKVLLNEEREDGQPLTVGWMFSISFSINTLNDGASCNFFCSLSLEDTWLGKSPR-CSRF

Query:  PCLYHLSCIR
          L++    R
Subjt:  PCLYHLSCIR
A0A1S3CC36 protein CHROMATIN REMODELING 19 isoform X29.4e-1345.45Show/hide
Query:  EDDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYRKGVGGVQKVLLNEEREDGQPLTVGWMFSISFSINTLNDGASCNFFCSLSLEDTWLGKSPR-CSRF
        +DDINAACK EDSDFEPVLKPYQLVGVNFLLLLY+KGVGG    +L +E   G+ +       +   +N  ND       C  S+ + W  +  + C  F
Subjt:  EDDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYRKGVGGVQKVLLNEEREDGQPLTVGWMFSISFSINTLNDGASCNFFCSLSLEDTWLGKSPR-CSRF

Query:  PCLYHLSCIR
          L++    R
Subjt:  PCLYHLSCIR
A0A6J1DYN8 protein CHROMATIN REMODELING 191.1e-1350Show/hide
Query:  EDDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYRKGVGGVQKVLLNEEREDGQPLTVGWMFSISFSINTLNDGASCNFFCSLSLEDTWLGKSPR-CSRF
        +DDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYRKGVGG    +L +E   G+ +       +   +N  ND       C  S+ + W  +  + C  F
Subjt:  EDDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYRKGVGGVQKVLLNEEREDGQPLTVGWMFSISFSINTLNDGASCNFFCSLSLEDTWLGKSPR-CSRF

Query:  PCL-YH
          L YH
Subjt:  PCL-YH
A0A6J1FXC0 protein CHROMATIN REMODELING 191.1e-1348.6Show/hide
Query:  EDDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYRKGVGGVQKVLLNEEREDGQPL-TVGWMFSISFSINTLNDGASCNFFCSLSLEDTWLGKSPR-CSR
        +DDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYRKGVGG    +L +E   G+ +  + ++  + +     ND       C  S+ + W  +  + C  
Subjt:  EDDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYRKGVGGVQKVLLNEEREDGQPL-TVGWMFSISFSINTLNDGASCNFFCSLSLEDTWLGKSPR-CSR

Query:  FPCL-YH
        F  L YH
Subjt:  FPCL-YH
A0A6J1JU99 protein CHROMATIN REMODELING 191.1e-1348.6Show/hide
Query:  EDDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYRKGVGGVQKVLLNEEREDGQPL-TVGWMFSISFSINTLNDGASCNFFCSLSLEDTWLGKSPR-CSR
        +DDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYRKGVGG    +L +E   G+ +  + ++  + +     ND       C  S+ + W  +  + C  
Subjt:  EDDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYRKGVGGVQKVLLNEEREDGQPL-TVGWMFSISFSINTLNDGASCNFFCSLSLEDTWLGKSPR-CSR

Query:  FPCL-YH
        F  L YH
Subjt:  FPCL-YH
SwissProt top hitse value%identityAlignment
Q9ZUL5 Protein CHROMATIN REMODELING 199.1e-1344.94Show/hide
Query:  EDDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYRKGVGGVQKVLLNEEREDGQPLTVGWMFSISFSINTLNDGASCNFFCSLSLEDTW
        ++DI+ ACKAEDSDF+P+LKPYQLVGVNFLLLLY+KG+ G    +L +E   G+ +      ++   +N  ND       C  S+ + W
Subjt:  EDDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYRKGVGGVQKVLLNEEREDGQPLTVGWMFSISFSINTLNDGASCNFFCSLSLEDTW
Arabidopsis top hitse value%identityAlignment
AT2G02090.1 SNF2 domain-containing protein / helicase domain-containing protein6.4e-1444.94Show/hide
Query:  EDDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYRKGVGGVQKVLLNEEREDGQPLTVGWMFSISFSINTLNDGASCNFFCSLSLEDTW
        ++DI+ ACKAEDSDF+P+LKPYQLVGVNFLLLLY+KG+ G    +L +E   G+ +      ++   +N  ND       C  S+ + W
Subjt:  EDDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYRKGVGGVQKVLLNEEREDGQPLTVGWMFSISFSINTLNDGASCNFFCSLSLEDTW

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGTGAAGACACTTGAGGATGATATTAATGCGGCTTGTAAGGCTGAAGATTCTGATTTTGAGCCTGTTCTCAAGCCATATCAACTGGTTGGCGTGAACTTTCTTCT
TCTTTTGTATCGGAAGGGAGTTGGTGGAGTTCAGAAGGTGCTGCTGAATGAAGAAAGGGAGGATGGGCAGCCCTTAACAGTAGGTTGGATGTTCTCCATATCTTTCTCCA
TAAATACTCTAAATGATGGAGCCTCTTGCAATTTTTTCTGTTCTCTCTCTTTGGAGGATACTTGGTTGGGCAAAAGCCCTCGTTGTTCTAGATTTCCTTGCTTGTATCAT
TTGTCCTGTATAAGGCTTCGCTTTGTGGCTTTCATTTTACCTTCTTTGGGGTACCTCTCCTGTGTTCTCTTTTGGCCTTTCCTCGTTGAGGGGAAAGGATATTCATTTTT
AGCTCCTGATCCTTTCAAGGGTTTTCTTGTTGATCTTTTTTCAGTCTTTTGTGTGACCCCTCTTCTTCCTGTGCCTCTCTTTTTCCATATTGTTAAAGGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGGTGAAGACACTTGAGGATGATATTAATGCGGCTTGTAAGGCTGAAGATTCTGATTTTGAGCCTGTTCTCAAGCCATATCAACTGGTTGGCGTGAACTTTCTTCT
TCTTTTGTATCGGAAGGGAGTTGGTGGAGTTCAGAAGGTGCTGCTGAATGAAGAAAGGGAGGATGGGCAGCCCTTAACAGTAGGTTGGATGTTCTCCATATCTTTCTCCA
TAAATACTCTAAATGATGGAGCCTCTTGCAATTTTTTCTGTTCTCTCTCTTTGGAGGATACTTGGTTGGGCAAAAGCCCTCGTTGTTCTAGATTTCCTTGCTTGTATCAT
TTGTCCTGTATAAGGCTTCGCTTTGTGGCTTTCATTTTACCTTCTTTGGGGTACCTCTCCTGTGTTCTCTTTTGGCCTTTCCTCGTTGAGGGGAAAGGATATTCATTTTT
AGCTCCTGATCCTTTCAAGGGTTTTCTTGTTGATCTTTTTTCAGTCTTTTGTGTGACCCCTCTTCTTCCTGTGCCTCTCTTTTTCCATATTGTTAAAGGCTAG
Protein sequenceShow/hide protein sequence
MKVKTLEDDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYRKGVGGVQKVLLNEEREDGQPLTVGWMFSISFSINTLNDGASCNFFCSLSLEDTWLGKSPRCSRFPCLYH
LSCIRLRFVAFILPSLGYLSCVLFWPFLVEGKGYSFLAPDPFKGFLVDLFSVFCVTPLLPVPLFFHIVKG