; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg005560 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg005560
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionPlant transposase
Genome locationscaffold7:27177417..27188499
RNA-Seq ExpressionSpg005560
SyntenySpg005560
Gene Ontology termsNA
InterPro domainsIPR004252 - Probable transposase, Ptta/En/Spm, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036852.1 Plant transposase [Cucumis melo var. makuwa]4.1e-4878.23Show/hide
Query:  MPDNLQSIDDWMDFVNEKTSANFMLKSERYKAMKKKQLSHTCSRKGYARLVEEMKKSFLDPTSITRITLWTKAHKKKNGEPVNSQVAKTLERIEQTDVET
        MPDNLQS+DDWMDFV+EKTSA F LKSE+YKAMKKKQL HTCSRKGYARL EEM+KS  DP+S+TR+ LWTKAHK+K+G+PVNSQVAKTL+RIEQT+ ET
Subjt:  MPDNLQSIDDWMDFVNEKTSANFMLKSERYKAMKKKQLSHTCSRKGYARLVEEMKKSFLDPTSITRITLWTKAHKKKNGEPVNSQVAKTLERIEQTDVET

Query:  ITSPNNVVEDALSKVLGPDRGHYR
          S  NVV+DALSKVLGPD GH R
Subjt:  ITSPNNVVEDALSKVLGPDRGHYR

KAA0036985.1 uncharacterized protein E6C27_scaffold86G00660 [Cucumis melo var. makuwa]7.0e-4878.23Show/hide
Query:  MPDNLQSIDDWMDFVNEKTSANFMLKSERYKAMKKKQLSHTCSRKGYARLVEEMKKSFLDPTSITRITLWTKAHKKKNGEPVNSQVAKTLERIEQTDVET
        MPDNLQS+DDWMDFV+EKTSA F LKSE+YKAMKKKQL HTCSRKGYARL EEM+KS  DP+ +TR+ LWTKAHK+K+G+PVNSQVA+TLERIEQT+ ET
Subjt:  MPDNLQSIDDWMDFVNEKTSANFMLKSERYKAMKKKQLSHTCSRKGYARLVEEMKKSFLDPTSITRITLWTKAHKKKNGEPVNSQVAKTLERIEQTDVET

Query:  ITSPNNVVEDALSKVLGPDRGHYR
          S  NVV+DALSKVLGPDRGH R
Subjt:  ITSPNNVVEDALSKVLGPDRGHYR

TYK07512.1 uncharacterized protein E5676_scaffold1702G00300 [Cucumis melo var. makuwa]7.0e-4878.23Show/hide
Query:  MPDNLQSIDDWMDFVNEKTSANFMLKSERYKAMKKKQLSHTCSRKGYARLVEEMKKSFLDPTSITRITLWTKAHKKKNGEPVNSQVAKTLERIEQTDVET
        MPDNLQS+DDWMDFV+EKTSA F LKSE+YKAMKKKQL HTCSRKGYARL EEM+KS  DP+ +TR+ LWTKAHK+K+G+PVNSQVA+TLERIEQT+ ET
Subjt:  MPDNLQSIDDWMDFVNEKTSANFMLKSERYKAMKKKQLSHTCSRKGYARLVEEMKKSFLDPTSITRITLWTKAHKKKNGEPVNSQVAKTLERIEQTDVET

Query:  ITSPNNVVEDALSKVLGPDRGHYR
          S  NVV+DALSKVLGPDRGH R
Subjt:  ITSPNNVVEDALSKVLGPDRGHYR

TYK13531.1 putative TNP1-like transposon protein [Cucumis melo var. makuwa]7.0e-4878.23Show/hide
Query:  MPDNLQSIDDWMDFVNEKTSANFMLKSERYKAMKKKQLSHTCSRKGYARLVEEMKKSFLDPTSITRITLWTKAHKKKNGEPVNSQVAKTLERIEQTDVET
        MPDNLQS+DDWMDFV+EKTSA F LKSE+YKAMKKKQL HTCSRKGYARL EEM+KS  DP+ +TR+ LWTKAHK+K+G+PVNSQVA+TLERIEQT+ ET
Subjt:  MPDNLQSIDDWMDFVNEKTSANFMLKSERYKAMKKKQLSHTCSRKGYARLVEEMKKSFLDPTSITRITLWTKAHKKKNGEPVNSQVAKTLERIEQTDVET

Query:  ITSPNNVVEDALSKVLGPDRGHYR
          S  NVV+DALSKVLGPDRGH R
Subjt:  ITSPNNVVEDALSKVLGPDRGHYR

TYK17902.1 uncharacterized protein E5676_scaffold306G001840 [Cucumis melo var. makuwa]7.0e-4878.23Show/hide
Query:  MPDNLQSIDDWMDFVNEKTSANFMLKSERYKAMKKKQLSHTCSRKGYARLVEEMKKSFLDPTSITRITLWTKAHKKKNGEPVNSQVAKTLERIEQTDVET
        MPDNLQS+DDWMDFV+EKTSA F LKSE+YKAMKKKQL HTCSRKGYARL EEM+KS  DP+ +TR+ LWTKAHK+K+G+PVNSQVA+TLERIEQT+ ET
Subjt:  MPDNLQSIDDWMDFVNEKTSANFMLKSERYKAMKKKQLSHTCSRKGYARLVEEMKKSFLDPTSITRITLWTKAHKKKNGEPVNSQVAKTLERIEQTDVET

Query:  ITSPNNVVEDALSKVLGPDRGHYR
          S  NVV+DALSKVLGPDRGH R
Subjt:  ITSPNNVVEDALSKVLGPDRGHYR

TrEMBL top hitse value%identityAlignment
A0A5A7T097 Plant transposase2.0e-4878.23Show/hide
Query:  MPDNLQSIDDWMDFVNEKTSANFMLKSERYKAMKKKQLSHTCSRKGYARLVEEMKKSFLDPTSITRITLWTKAHKKKNGEPVNSQVAKTLERIEQTDVET
        MPDNLQS+DDWMDFV+EKTSA F LKSE+YKAMKKKQL HTCSRKGYARL EEM+KS  DP+S+TR+ LWTKAHK+K+G+PVNSQVAKTL+RIEQT+ ET
Subjt:  MPDNLQSIDDWMDFVNEKTSANFMLKSERYKAMKKKQLSHTCSRKGYARLVEEMKKSFLDPTSITRITLWTKAHKKKNGEPVNSQVAKTLERIEQTDVET

Query:  ITSPNNVVEDALSKVLGPDRGHYR
          S  NVV+DALSKVLGPD GH R
Subjt:  ITSPNNVVEDALSKVLGPDRGHYR

A0A5A7T672 Uncharacterized protein3.4e-4878.23Show/hide
Query:  MPDNLQSIDDWMDFVNEKTSANFMLKSERYKAMKKKQLSHTCSRKGYARLVEEMKKSFLDPTSITRITLWTKAHKKKNGEPVNSQVAKTLERIEQTDVET
        MPDNLQS+DDWMDFV+EKTSA F LKSE+YKAMKKKQL HTCSRKGYARL EEM+KS  DP+ +TR+ LWTKAHK+K+G+PVNSQVA+TLERIEQT+ ET
Subjt:  MPDNLQSIDDWMDFVNEKTSANFMLKSERYKAMKKKQLSHTCSRKGYARLVEEMKKSFLDPTSITRITLWTKAHKKKNGEPVNSQVAKTLERIEQTDVET

Query:  ITSPNNVVEDALSKVLGPDRGHYR
          S  NVV+DALSKVLGPDRGH R
Subjt:  ITSPNNVVEDALSKVLGPDRGHYR

A0A5A7T7V4 Uncharacterized protein3.4e-4878.23Show/hide
Query:  MPDNLQSIDDWMDFVNEKTSANFMLKSERYKAMKKKQLSHTCSRKGYARLVEEMKKSFLDPTSITRITLWTKAHKKKNGEPVNSQVAKTLERIEQTDVET
        MPDNLQS+DDWMDFV+EKTSA F LKSE+YKAMKKKQL HTCSRKGYARL EEM+KS  DP+ +TR+ LWTKAHK+K+G+PVNSQVA+TLERIEQT+ ET
Subjt:  MPDNLQSIDDWMDFVNEKTSANFMLKSERYKAMKKKQLSHTCSRKGYARLVEEMKKSFLDPTSITRITLWTKAHKKKNGEPVNSQVAKTLERIEQTDVET

Query:  ITSPNNVVEDALSKVLGPDRGHYR
          S  NVV+DALSKVLGPDRGH R
Subjt:  ITSPNNVVEDALSKVLGPDRGHYR

A0A5D3D211 Uncharacterized protein3.4e-4878.23Show/hide
Query:  MPDNLQSIDDWMDFVNEKTSANFMLKSERYKAMKKKQLSHTCSRKGYARLVEEMKKSFLDPTSITRITLWTKAHKKKNGEPVNSQVAKTLERIEQTDVET
        MPDNLQS+DDWMDFV+EKTSA F LKSE+YKAMKKKQL HTCSRKGYARL EEM+KS  DP+ +TR+ LWTKAHK+K+G+PVNSQVA+TLERIEQT+ ET
Subjt:  MPDNLQSIDDWMDFVNEKTSANFMLKSERYKAMKKKQLSHTCSRKGYARLVEEMKKSFLDPTSITRITLWTKAHKKKNGEPVNSQVAKTLERIEQTDVET

Query:  ITSPNNVVEDALSKVLGPDRGHYR
          S  NVV+DALSKVLGPDRGH R
Subjt:  ITSPNNVVEDALSKVLGPDRGHYR

A0A5D3DCM2 Uncharacterized protein3.4e-4878.23Show/hide
Query:  MPDNLQSIDDWMDFVNEKTSANFMLKSERYKAMKKKQLSHTCSRKGYARLVEEMKKSFLDPTSITRITLWTKAHKKKNGEPVNSQVAKTLERIEQTDVET
        MPDNLQS+DDWMDFV+EKTSA F LKSE+YKAMKKKQL HTCSRKGYARL EEM+KS  DP+ +TR+ LWTKAHK+K+G+PVNSQVA+TLERIEQT+ ET
Subjt:  MPDNLQSIDDWMDFVNEKTSANFMLKSERYKAMKKKQLSHTCSRKGYARLVEEMKKSFLDPTSITRITLWTKAHKKKNGEPVNSQVAKTLERIEQTDVET

Query:  ITSPNNVVEDALSKVLGPDRGHYR
          S  NVV+DALSKVLGPDRGH R
Subjt:  ITSPNNVVEDALSKVLGPDRGHYR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAGATAATTTACAATCTATAGATGATTGGATGGATTTTGTCAATGAAAAGACTAGTGCAAATTTTATGTTAAAAAGTGAACGATATAAAGCCATGAAGAAGAAACA
ACTTTCACATACATGTAGTAGGAAAGGGTATGCTCGTTTGGTTGAAGAGATGAAAAAAAGTTTCTTGGATCCAACTTCAATCACGAGGATTACGTTATGGACAAAGGCAC
ACAAAAAGAAGAATGGAGAACCAGTGAATTCACAAGTTGCCAAGACACTTGAACGTATTGAACAAACTGATGTTGAGACAATAACTTCTCCAAATAACGTTGTTGAGGAT
GCATTGAGTAAAGTTCTTGGTCCTGATCGTGGGCATTATAGGGATAAGGCTGGGTACCTTATCCTGGTGACACTATGGATACGACCCGCTTTGTATATTGATACAAACGT
ATTGATCCAACGCGTTCGTGTAGTTGACATGCGAGTGGGGGTATCCTGTGCAATGAGTCCATCAGGTCCCATCGGTAGCTCTATAAGGGCGTTGAGCGAAATCAAAGTCC
TTTCGCTGCTGTTTTTCAGAGCATTCCGGGGAAAATCTTGGCGAAACGATCAAAGAACTCTTCAAGGAGATCTCTCCCGAAAGACTCCCACCAGTCTCCTGCTTCAAGAA
GTCTTAGAGATATACCGGTGGCTGGTCTGGGGTCGGTTTGGTCAGGTTCAAGCTTGTTTTGGTGATTTGAAGTCCGGTTCGAAGCGGTTTGGGTTGGTTCGTGTGGTCTT
GCCA
mRNA sequenceShow/hide mRNA sequence
ATGCCAGATAATTTACAATCTATAGATGATTGGATGGATTTTGTCAATGAAAAGACTAGTGCAAATTTTATGTTAAAAAGTGAACGATATAAAGCCATGAAGAAGAAACA
ACTTTCACATACATGTAGTAGGAAAGGGTATGCTCGTTTGGTTGAAGAGATGAAAAAAAGTTTCTTGGATCCAACTTCAATCACGAGGATTACGTTATGGACAAAGGCAC
ACAAAAAGAAGAATGGAGAACCAGTGAATTCACAAGTTGCCAAGACACTTGAACGTATTGAACAAACTGATGTTGAGACAATAACTTCTCCAAATAACGTTGTTGAGGAT
GCATTGAGTAAAGTTCTTGGTCCTGATCGTGGGCATTATAGGGATAAGGCTGGGTACCTTATCCTGGTGACACTATGGATACGACCCGCTTTGTATATTGATACAAACGT
ATTGATCCAACGCGTTCGTGTAGTTGACATGCGAGTGGGGGTATCCTGTGCAATGAGTCCATCAGGTCCCATCGGTAGCTCTATAAGGGCGTTGAGCGAAATCAAAGTCC
TTTCGCTGCTGTTTTTCAGAGCATTCCGGGGAAAATCTTGGCGAAACGATCAAAGAACTCTTCAAGGAGATCTCTCCCGAAAGACTCCCACCAGTCTCCTGCTTCAAGAA
GTCTTAGAGATATACCGGTGGCTGGTCTGGGGTCGGTTTGGTCAGGTTCAAGCTTGTTTTGGTGATTTGAAGTCCGGTTCGAAGCGGTTTGGGTTGGTTCGTGTGGTCTT
GCCA
Protein sequenceShow/hide protein sequence
MPDNLQSIDDWMDFVNEKTSANFMLKSERYKAMKKKQLSHTCSRKGYARLVEEMKKSFLDPTSITRITLWTKAHKKKNGEPVNSQVAKTLERIEQTDVETITSPNNVVED
ALSKVLGPDRGHYRDKAGYLILVTLWIRPALYIDTNVLIQRVRVVDMRVGVSCAMSPSGPIGSSIRALSEIKVLSLLFFRAFRGKSWRNDQRTLQGDLSRKTPTSLLLQE
VLEIYRWLVWGRFGQVQACFGDLKSGSKRFGLVRVVLP