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Spg005667 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg005667
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionEukaryotic translation initiation factor 3 subunit I
Genome locationscaffold8:20104164..20105638
RNA-Seq ExpressionSpg005667
SyntenySpg005667
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8695166.1 hypothetical protein F3Y22_tig00110733pilonHSYRG00282 [Hibiscus syriacus]2.3e-0825.12Show/hide
Query:  FINHFARAKYIEMMKRDFLFERGFSGDLPHFLRVG------ITNHGWELLCSKPEPVNSQVVREFYSNINE-----------------------------
        F++  A+  Y  +  R   FE GF         +G      +T H W+     P PVN+ +V+EFYSNI E                             
Subjt:  FINHFARAKYIEMMKRDFLFERGFSGDLPHFLRVG------ITNHGWELLCSKPEPVNSQVVREFYSNINE-----------------------------

Query:  ---------EEGCQVHSG-------------GYRKPRRGLSAAYLKKEANTWMGFIRQQLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVGEFFGCW
                 E   + + G             G +  R+ +    L      W  F++ +L+PT+H++TVS +R+LL  +IL   +ID+GKIIV     C 
Subjt:  ---------EEGCQVHSG-------------GYRKPRRGLSAAYLKKEANTWMGFIRQQLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVGEFFGCW

Query:  CKKVNAM
         ++ +A+
Subjt:  CKKVNAM

KAE8712804.1 hypothetical protein F3Y22_tig00110223pilonHSYRG00028 [Hibiscus syriacus]6.5e-1129.82Show/hide
Query:  ARAKYIEMMKRDFLFERGF------SGDLPHFLRVGITNHGWELLCSKPEPVNSQVVREFYSNINE--EEGCQVHS------------------GGYRKP
        A  +Y  +  R   FE GF        DL   +   +T H W+     P  VN+ +V+EFYSNI E  +    VH                    G +  
Subjt:  ARAKYIEMMKRDFLFERGF------SGDLPHFLRVGITNHGWELLCSKPEPVNSQVVREFYSNINE--EEGCQVHS------------------GGYRKP

Query:  RRGLSAAYLKKEANTWMGFIRQQLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVGEFFGCWCKKVNAM
        R+ +    L      W  F++ +LLPT+H++TVS +R++L  +I+  L+ID+GKIIV +   C  +  +A+
Subjt:  RRGLSAAYLKKEANTWMGFIRQQLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVGEFFGCWCKKVNAM

KAE8734433.1 Eukaryotic translation initiation factor 3 subunit I [Hibiscus syriacus]8.0e-0929.86Show/hide
Query:  HGWELLCSKPEPVNSQVVREFYSNINEEEGCQVHS-------GGYRKPRRGLSAAYLKKEANTWMGFIRQQLLPTTHDSTVSRERVLLAFAILRSLSIDV
        H W+ +   P  VN+ +V+ FY+NI E     V +        G +  RR ++   L+  A  W  F++ +LLPT+H++TVS +R+    +I+   SID+
Subjt:  HGWELLCSKPEPVNSQVVREFYSNINEEEGCQVHS-------GGYRKPRRGLSAAYLKKEANTWMGFIRQQLLPTTHDSTVSRERVLLAFAILRSLSIDV

Query:  GKIIVGEFFGCWCKKVNAMPSQFSSMICLIPGFHPRQSKERRRN
         KIIV +   C  +  +A+     + I ++ G    + KE+  N
Subjt:  GKIIVGEFFGCWCKKVNAMPSQFSSMICLIPGFHPRQSKERRRN

PON41193.1 LOW QUALITY PROTEIN: hypothetical protein PanWU01x14_291710 [Parasponia andersonii]8.8e-0826.32Show/hide
Query:  PHFLRVGITNHGWELLCSKPEPVNSQVVREFYSNINEEEGCQVHSGGYRKPRRGLSAAY-----------------------------------------
        P F    I  H W L C+ PE     +V EFY+NI + +   +++  ++ P   ++A +                                         
Subjt:  PHFLRVGITNHGWELLCSKPEPVNSQVVREFYSNINEEEGCQVHSGGYRKPRRGLSAAY-----------------------------------------

Query:  --------LKKEANTWMGFIRQQLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVGEFFGCWCKKVNAM
                L      W  F++  LLPTTH  TVS++R LL ++IL   SI+VG+II  E   C  KK+ A+
Subjt:  --------LKKEANTWMGFIRQQLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVGEFFGCWCKKVNAM

PON70375.1 hypothetical protein PanWU01x14_080440 [Parasponia andersonii]8.0e-0925.89Show/hide
Query:  MKRDFLFERGFSGDLPHFLRVGITNHGWELLCSKPEPVNSQVVREFYSNINEEEGCQVHSGGYRKP----------------------------------
        ++++F+++     + P F+   I  H W+L C+ PE     +VREFY+N+   +   V+  G + P                                  
Subjt:  MKRDFLFERGFSGDLPHFLRVGITNHGWELLCSKPEPVNSQVVREFYSNINEEEGCQVHSGGYRKP----------------------------------

Query:  -----------RRGLSAAY------LKKEANTWMGFIRQQLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVGEFFGCWCKKVNAM--PSQFSSM
                         AY      L   A  W  F++ +LLPTTH  TVS+E V L +++L   SI+VG++I  E   C  +K  A+  PS  +SM
Subjt:  -----------RRGLSAAY------LKKEANTWMGFIRQQLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVGEFFGCWCKKVNAM--PSQFSSM

TrEMBL top hitse value%identityAlignment
A0A2P5AXB5 Uncharacterized protein4.3e-0826.32Show/hide
Query:  PHFLRVGITNHGWELLCSKPEPVNSQVVREFYSNINEEEGCQVHSGGYRKPRRGLSAAY-----------------------------------------
        P F    I  H W L C+ PE     +V EFY+NI + +   +++  ++ P   ++A +                                         
Subjt:  PHFLRVGITNHGWELLCSKPEPVNSQVVREFYSNINEEEGCQVHSGGYRKPRRGLSAAY-----------------------------------------

Query:  --------LKKEANTWMGFIRQQLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVGEFFGCWCKKVNAM
                L      W  F++  LLPTTH  TVS++R LL ++IL   SI+VG+II  E   C  KK+ A+
Subjt:  --------LKKEANTWMGFIRQQLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVGEFFGCWCKKVNAM

A0A2P5DAQ2 Uncharacterized protein3.9e-0925.89Show/hide
Query:  MKRDFLFERGFSGDLPHFLRVGITNHGWELLCSKPEPVNSQVVREFYSNINEEEGCQVHSGGYRKP----------------------------------
        ++++F+++     + P F+   I  H W+L C+ PE     +VREFY+N+   +   V+  G + P                                  
Subjt:  MKRDFLFERGFSGDLPHFLRVGITNHGWELLCSKPEPVNSQVVREFYSNINEEEGCQVHSGGYRKP----------------------------------

Query:  -----------RRGLSAAY------LKKEANTWMGFIRQQLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVGEFFGCWCKKVNAM--PSQFSSM
                         AY      L   A  W  F++ +LLPTTH  TVS+E V L +++L   SI+VG++I  E   C  +K  A+  PS  +SM
Subjt:  -----------RRGLSAAY------LKKEANTWMGFIRQQLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVGEFFGCWCKKVNAM--PSQFSSM

A0A6A2ZUE4 Uncharacterized protein1.1e-0825.12Show/hide
Query:  FINHFARAKYIEMMKRDFLFERGFSGDLPHFLRVG------ITNHGWELLCSKPEPVNSQVVREFYSNINE-----------------------------
        F++  A+  Y  +  R   FE GF         +G      +T H W+     P PVN+ +V+EFYSNI E                             
Subjt:  FINHFARAKYIEMMKRDFLFERGFSGDLPHFLRVG------ITNHGWELLCSKPEPVNSQVVREFYSNINE-----------------------------

Query:  ---------EEGCQVHSG-------------GYRKPRRGLSAAYLKKEANTWMGFIRQQLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVGEFFGCW
                 E   + + G             G +  R+ +    L      W  F++ +L+PT+H++TVS +R+LL  +IL   +ID+GKIIV     C 
Subjt:  ---------EEGCQVHSG-------------GYRKPRRGLSAAYLKKEANTWMGFIRQQLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVGEFFGCW

Query:  CKKVNAM
         ++ +A+
Subjt:  CKKVNAM

A0A6A3B6J9 RT_RNaseH_2 domain-containing protein3.2e-1129.82Show/hide
Query:  ARAKYIEMMKRDFLFERGF------SGDLPHFLRVGITNHGWELLCSKPEPVNSQVVREFYSNINE--EEGCQVHS------------------GGYRKP
        A  +Y  +  R   FE GF        DL   +   +T H W+     P  VN+ +V+EFYSNI E  +    VH                    G +  
Subjt:  ARAKYIEMMKRDFLFERGF------SGDLPHFLRVGITNHGWELLCSKPEPVNSQVVREFYSNINE--EEGCQVHS------------------GGYRKP

Query:  RRGLSAAYLKKEANTWMGFIRQQLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVGEFFGCWCKKVNAM
        R+ +    L      W  F++ +LLPT+H++TVS +R++L  +I+  L+ID+GKIIV +   C  +  +A+
Subjt:  RRGLSAAYLKKEANTWMGFIRQQLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVGEFFGCWCKKVNAM

A0A6A3CYH7 Eukaryotic translation initiation factor 3 subunit I3.9e-0929.86Show/hide
Query:  HGWELLCSKPEPVNSQVVREFYSNINEEEGCQVHS-------GGYRKPRRGLSAAYLKKEANTWMGFIRQQLLPTTHDSTVSRERVLLAFAILRSLSIDV
        H W+ +   P  VN+ +V+ FY+NI E     V +        G +  RR ++   L+  A  W  F++ +LLPT+H++TVS +R+    +I+   SID+
Subjt:  HGWELLCSKPEPVNSQVVREFYSNINEEEGCQVHS-------GGYRKPRRGLSAAYLKKEANTWMGFIRQQLLPTTHDSTVSRERVLLAFAILRSLSIDV

Query:  GKIIVGEFFGCWCKKVNAMPSQFSSMICLIPGFHPRQSKERRRN
         KIIV +   C  +  +A+     + I ++ G    + KE+  N
Subjt:  GKIIVGEFFGCWCKKVNAMPSQFSSMICLIPGFHPRQSKERRRN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAGAAGCAGAAGTCTCTAAAGTATTACAGAAGGTCATTGAGGACATTGTTGAAGAAGTAGTCGCTGAGGAAGAACCGAAAGATTCTAAAAAAGAAAAAGATCCTGA
GAAGATTAATGGAACAGAGCAAGAGAGTCAAGAAAAGGCAGCAATAGATTTGCACGGGCAAGGGCGGATTAAAAGGGTTCGGACGGACATTCCATCTCCTCCTTCGACTG
AATCGGAAAAAGAAGAACCTGAAAATCAAGAAGAGGTCGAGAAGAAGTCCGCAGAAGATGAAATCGAAAAGAAGAATGATGAAGATAAGGGCAAAGGTATTGCAAGAGTT
GAGGTTGAAGCAGAAGTGGCAAGGCTAGAGGAAAGAAGGTTGCCATATGAGCGCTTTATCAATCACTTTGCGAGGGCAAAATATATAGAGATGATGAAGAGAGATTTTCT
GTTCGAGAGGGGGTTCAGTGGTGATCTTCCGCACTTTTTGAGGGTTGGCATCACAAACCATGGCTGGGAGTTATTATGTTCCAAGCCAGAGCCTGTGAATTCGCAAGTGG
TGCGAGAGTTCTACTCGAACATCAACGAGGAAGAAGGTTGTCAAGTGCACAGTGGCGGCTATCGAAAACCAAGAAGAGGACTTTCTGCTGCTTATCTGAAGAAGGAAGCC
AACACTTGGATGGGATTTATCAGGCAACAGTTGCTTCCAACAACGCACGACTCCACAGTCTCTCGGGAAAGAGTTCTTCTGGCTTTTGCAATACTAAGGTCTCTTAGCAT
CGACGTAGGTAAGATCATTGTTGGTGAATTTTTTGGGTGTTGGTGTAAGAAGGTCAATGCTATGCCTTCCCAGTTTTCCTCGATGATTTGTTTAATCCCTGGATTCCACC
CCCGCCAGTCGAAAGAGAGGAGGAGGAATAAGATGATCAAGGTCAGGAGGATTGATGAAGGAAGAGAAGTTGGGCTAGCATAA
mRNA sequenceShow/hide mRNA sequence
ATGACAGAAGCAGAAGTCTCTAAAGTATTACAGAAGGTCATTGAGGACATTGTTGAAGAAGTAGTCGCTGAGGAAGAACCGAAAGATTCTAAAAAAGAAAAAGATCCTGA
GAAGATTAATGGAACAGAGCAAGAGAGTCAAGAAAAGGCAGCAATAGATTTGCACGGGCAAGGGCGGATTAAAAGGGTTCGGACGGACATTCCATCTCCTCCTTCGACTG
AATCGGAAAAAGAAGAACCTGAAAATCAAGAAGAGGTCGAGAAGAAGTCCGCAGAAGATGAAATCGAAAAGAAGAATGATGAAGATAAGGGCAAAGGTATTGCAAGAGTT
GAGGTTGAAGCAGAAGTGGCAAGGCTAGAGGAAAGAAGGTTGCCATATGAGCGCTTTATCAATCACTTTGCGAGGGCAAAATATATAGAGATGATGAAGAGAGATTTTCT
GTTCGAGAGGGGGTTCAGTGGTGATCTTCCGCACTTTTTGAGGGTTGGCATCACAAACCATGGCTGGGAGTTATTATGTTCCAAGCCAGAGCCTGTGAATTCGCAAGTGG
TGCGAGAGTTCTACTCGAACATCAACGAGGAAGAAGGTTGTCAAGTGCACAGTGGCGGCTATCGAAAACCAAGAAGAGGACTTTCTGCTGCTTATCTGAAGAAGGAAGCC
AACACTTGGATGGGATTTATCAGGCAACAGTTGCTTCCAACAACGCACGACTCCACAGTCTCTCGGGAAAGAGTTCTTCTGGCTTTTGCAATACTAAGGTCTCTTAGCAT
CGACGTAGGTAAGATCATTGTTGGTGAATTTTTTGGGTGTTGGTGTAAGAAGGTCAATGCTATGCCTTCCCAGTTTTCCTCGATGATTTGTTTAATCCCTGGATTCCACC
CCCGCCAGTCGAAAGAGAGGAGGAGGAATAAGATGATCAAGGTCAGGAGGATTGATGAAGGAAGAGAAGTTGGGCTAGCATAA
Protein sequenceShow/hide protein sequence
MTEAEVSKVLQKVIEDIVEEVVAEEEPKDSKKEKDPEKINGTEQESQEKAAIDLHGQGRIKRVRTDIPSPPSTESEKEEPENQEEVEKKSAEDEIEKKNDEDKGKGIARV
EVEAEVARLEERRLPYERFINHFARAKYIEMMKRDFLFERGFSGDLPHFLRVGITNHGWELLCSKPEPVNSQVVREFYSNINEEEGCQVHSGGYRKPRRGLSAAYLKKEA
NTWMGFIRQQLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVGEFFGCWCKKVNAMPSQFSSMICLIPGFHPRQSKERRRNKMIKVRRIDEGREVGLA