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Spg005678 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg005678
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Description(1->3)-beta-glucan endohydrolase
Genome locationscaffold8:20107909..20108399
RNA-Seq ExpressionSpg005678
SyntenySpg005678
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147788.1 glucan endo-1,3-beta-glucosidase 7 [Cucumis sativus]8.1e-0475.86Show/hide
Query:  MNLFYHSADQDPWTCDFPQSATLSSNNPS
        MNLF+ +  +DPWTCDF QSATLSSNNPS
Subjt:  MNLFYHSADQDPWTCDFPQSATLSSNNPS
XP_008466580.1 PREDICTED: glucan endo-1,3-beta-glucosidase 7 [Cucumis melo]8.1e-0475.86Show/hide
Query:  MNLFYHSADQDPWTCDFPQSATLSSNNPS
        MNLF+ +  +DPWTCDF QSATLSSNNPS
Subjt:  MNLFYHSADQDPWTCDFPQSATLSSNNPS
XP_038905742.1 glucan endo-1,3-beta-glucosidase 7-like [Benincasa hispida]9.5e-0579.31Show/hide
Query:  MNLFYHSADQDPWTCDFPQSATLSSNNPS
        MNLF+ +AD+DPWTCDF Q+ATLSSNNPS
Subjt:  MNLFYHSADQDPWTCDFPQSATLSSNNPS
TrEMBL top hitse value%identityAlignment
A0A0A0LG31 (1->3)-beta-glucan endohydrolase3.9e-0475.86Show/hide
Query:  MNLFYHSADQDPWTCDFPQSATLSSNNPS
        MNLF+ +  +DPWTCDF QSATLSSNNPS
Subjt:  MNLFYHSADQDPWTCDFPQSATLSSNNPS
A0A1S3CRM8 (1->3)-beta-glucan endohydrolase3.9e-0475.86Show/hide
Query:  MNLFYHSADQDPWTCDFPQSATLSSNNPS
        MNLF+ +  +DPWTCDF QSATLSSNNPS
Subjt:  MNLFYHSADQDPWTCDFPQSATLSSNNPS
A0A2I0IMC0 Glucan endo-1,3-beta-D-glucosidase8.7e-0467.74Show/hide
Query:  MNLFYHSADQDPWTCDFPQSATLSSNNPSEK
        MNLFY ++D++PW CDF Q+ATLSS+NPS K
Subjt:  MNLFYHSADQDPWTCDFPQSATLSSNNPSEK
A0A5A7TJN0 (1->3)-beta-glucan endohydrolase3.9e-0475.86Show/hide
Query:  MNLFYHSADQDPWTCDFPQSATLSSNNPS
        MNLF+ +  +DPWTCDF QSATLSSNNPS
Subjt:  MNLFYHSADQDPWTCDFPQSATLSSNNPS
A0A6J1FQX2 (1->3)-beta-glucan endohydrolase5.1e-0479.31Show/hide
Query:  MNLFYHSADQDPWTCDFPQSATLSSNNPS
        MNLFY +A + PWTCDF QSATLSSNNPS
Subjt:  MNLFYHSADQDPWTCDFPQSATLSSNNPS
SwissProt top hitse value%identityAlignment
Q94G86 Glucan endo-1,3-beta-D-glucosidase8.4e-0458.62Show/hide
Query:  MNLFYHSADQDPWTCDFPQSATLSSNNPS
        MNL+Y SA ++ W CDF Q+ATL++ NPS
Subjt:  MNLFYHSADQDPWTCDFPQSATLSSNNPS
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACCTCTTCTACCATAGCGCCGACCAGGATCCATGGACATGTGACTTCCCACAGTCTGCCACACTTTCCTCCAACAACCCAAGTGAGAAAATCAAGCCATTGTTAAT
TTTCATATTGAAGTTCTTCACAATTAACATGAGTGCATATGCTTGTGGCCTCTTCGGATGCAACCGCCATCGGAGCAGATTGGACGGAAAGCAGAGGATCGTTGTTGGAA
CGTCCGATGATGGCAAAATTAGGGGAACGAGAATTGAAGCGCTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAACCTCTTCTACCATAGCGCCGACCAGGATCCATGGACATGTGACTTCCCACAGTCTGCCACACTTTCCTCCAACAACCCAAGTGAGAAAATCAAGCCATTGTTAAT
TTTCATATTGAAGTTCTTCACAATTAACATGAGTGCATATGCTTGTGGCCTCTTCGGATGCAACCGCCATCGGAGCAGATTGGACGGAAAGCAGAGGATCGTTGTTGGAA
CGTCCGATGATGGCAAAATTAGGGGAACGAGAATTGAAGCGCTGTAG
Protein sequenceShow/hide protein sequence
MNLFYHSADQDPWTCDFPQSATLSSNNPSEKIKPLLIFILKFFTINMSAYACGLFGCNRHRSRLDGKQRIVVGTSDDGKIRGTRIEAL