; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg005754 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg005754
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionnodulin homeobox
Genome locationscaffold11:2680327..2684779
RNA-Seq ExpressionSpg005754
SyntenySpg005754
Gene Ontology termsGO:0009908 - flower development (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003697 - single-stranded DNA binding (molecular function)
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain
IPR039325 - Nodulin homeobox protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607227.1 Nodulin homeobox, partial [Cucurbita argyrosperma subsp. sororia]1.5e-4991.45Show/hide
Query:  KSKFSRMRQFKEELYCNVTQAIDLTSAVKELNKLSSQELSKLLRDSENFAIQYTSENNLQMTIDVEKLACFLPLHLMAVLMSSDRDEALFKYLLCGVRLL
        + KFSRMRQFKEE Y NVTQAIDL SAVKELNKLSSQELSKLLRDSENFAI Y+SE+N+QMTIDVEKLACFLPLHLMAVLMSSDRDEALFKYLLCGVRLL
Subjt:  KSKFSRMRQFKEELYCNVTQAIDLTSAVKELNKLSSQELSKLLRDSENFAIQYTSENNLQMTIDVEKLACFLPLHLMAVLMSSDRDEALFKYLLCGVRLL

Query:  HSLCDLAPRHAKLEQAL
        HSLCDLAPRHAKLEQ L
Subjt:  HSLCDLAPRHAKLEQAL

KAG7036912.1 Nodulin homeobox, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-4991.45Show/hide
Query:  KSKFSRMRQFKEELYCNVTQAIDLTSAVKELNKLSSQELSKLLRDSENFAIQYTSENNLQMTIDVEKLACFLPLHLMAVLMSSDRDEALFKYLLCGVRLL
        + KFSRMRQFKEE Y NVTQAIDL SAVKELNKLSSQELSKLLRDSENFAI Y+SE+N+QMTIDVEKLACFLPLHLMAVLMSSDRDEALFKYLLCGVRLL
Subjt:  KSKFSRMRQFKEELYCNVTQAIDLTSAVKELNKLSSQELSKLLRDSENFAIQYTSENNLQMTIDVEKLACFLPLHLMAVLMSSDRDEALFKYLLCGVRLL

Query:  HSLCDLAPRHAKLEQAL
        HSLCDLAPRHAKLEQ L
Subjt:  HSLCDLAPRHAKLEQAL

XP_022949177.1 nodulin homeobox [Cucurbita moschata]5.4e-4792.79Show/hide
Query:  MRQFKEELYCNVTQAIDLTSAVKELNKLSSQELSKLLRDSENFAIQYTSENNLQMTIDVEKLACFLPLHLMAVLMSSDRDEALFKYLLCGVRLLHSLCDL
        MRQFKEE Y NVTQAIDL SAVKELNKLSSQELSKLLRDSENFAI Y+SE+N+QMTIDVEKLACFLPLHLMAVLMSSDRDEALFKYLLCGVRLLHSLCDL
Subjt:  MRQFKEELYCNVTQAIDLTSAVKELNKLSSQELSKLLRDSENFAIQYTSENNLQMTIDVEKLACFLPLHLMAVLMSSDRDEALFKYLLCGVRLLHSLCDL

Query:  APRHAKLEQAL
        APRHAKLEQ L
Subjt:  APRHAKLEQAL

XP_023522746.1 nodulin homeobox isoform X1 [Cucurbita pepo subsp. pepo]5.4e-4792.79Show/hide
Query:  MRQFKEELYCNVTQAIDLTSAVKELNKLSSQELSKLLRDSENFAIQYTSENNLQMTIDVEKLACFLPLHLMAVLMSSDRDEALFKYLLCGVRLLHSLCDL
        MRQFKEE Y NVTQAIDL SAVKELNKLSSQELSKLLRDSENFAI Y+SE+N+QMTIDVEKLACFLPLHLMAVLMSSDRDEALFKYLLCGVRLLHSLCDL
Subjt:  MRQFKEELYCNVTQAIDLTSAVKELNKLSSQELSKLLRDSENFAIQYTSENNLQMTIDVEKLACFLPLHLMAVLMSSDRDEALFKYLLCGVRLLHSLCDL

Query:  APRHAKLEQAL
        APRHAKLEQ L
Subjt:  APRHAKLEQAL

XP_023522758.1 nodulin homeobox isoform X3 [Cucurbita pepo subsp. pepo]5.4e-4792.79Show/hide
Query:  MRQFKEELYCNVTQAIDLTSAVKELNKLSSQELSKLLRDSENFAIQYTSENNLQMTIDVEKLACFLPLHLMAVLMSSDRDEALFKYLLCGVRLLHSLCDL
        MRQFKEE Y NVTQAIDL SAVKELNKLSSQELSKLLRDSENFAI Y+SE+N+QMTIDVEKLACFLPLHLMAVLMSSDRDEALFKYLLCGVRLLHSLCDL
Subjt:  MRQFKEELYCNVTQAIDLTSAVKELNKLSSQELSKLLRDSENFAIQYTSENNLQMTIDVEKLACFLPLHLMAVLMSSDRDEALFKYLLCGVRLLHSLCDL

Query:  APRHAKLEQAL
        APRHAKLEQ L
Subjt:  APRHAKLEQAL

TrEMBL top hitse value%identityAlignment
A0A0A0LVA2 Homeobox domain-containing protein2.4e-4588.29Show/hide
Query:  MRQFKEELYCNVTQAIDLTSAVKELNKLSSQELSKLLRDSENFAIQYTSENNLQMTIDVEKLACFLPLHLMAVLMSSDRDEALFKYLLCGVRLLHSLCDL
        MRQFKEE+Y NVTQAIDL SAVKELNK SSQELSKLLRDSENF I YTSENN+QMTIDVEKLACFLPLHLMAVL+SS+RDEAL+KYLLCGVRLL+SLCDL
Subjt:  MRQFKEELYCNVTQAIDLTSAVKELNKLSSQELSKLLRDSENFAIQYTSENNLQMTIDVEKLACFLPLHLMAVLMSSDRDEALFKYLLCGVRLLHSLCDL

Query:  APRHAKLEQAL
        APRHA+LEQ L
Subjt:  APRHAKLEQAL

A0A1S4E1L6 nodulin homeobox isoform X27.1e-4587.39Show/hide
Query:  MRQFKEELYCNVTQAIDLTSAVKELNKLSSQELSKLLRDSENFAIQYTSENNLQMTIDVEKLACFLPLHLMAVLMSSDRDEALFKYLLCGVRLLHSLCDL
        MRQFKEE+Y NVTQAIDL SAVKELNK SSQEL KLLRDSENF I YTSENN+QMTIDVEKLACFLPLHLMAVL+SS+RDEAL+KYLLCGVRLL+SLCDL
Subjt:  MRQFKEELYCNVTQAIDLTSAVKELNKLSSQELSKLLRDSENFAIQYTSENNLQMTIDVEKLACFLPLHLMAVLMSSDRDEALFKYLLCGVRLLHSLCDL

Query:  APRHAKLEQAL
        APRHA+LEQ L
Subjt:  APRHAKLEQAL

A0A5D3DAH8 Nodulin homeobox isoform X27.1e-4574.31Show/hide
Query:  MRQFKEELYCNVTQAIDLTSAVKELNKLSSQELSKLLRDSENFAIQYTSENNLQMTIDVEKLACFLPLHLMAVLMSSDRDEALFKYLLCGVRLLHSLCDL
        MRQFKEE+Y NVTQAIDL SAVKELNK SSQEL KLLRDSENF I YTSENN+QMTIDVEKLACFLPLHLMAVL+SS+RDEAL+KYLLCGVRLL+SLCDL
Subjt:  MRQFKEELYCNVTQAIDLTSAVKELNKLSSQELSKLLRDSENFAIQYTSENNLQMTIDVEKLACFLPLHLMAVLMSSDRDEALFKYLLCGVRLLHSLCDL

Query:  APRHAKLEQA------LKERFPCI---YRL---SMAKEATVFEL
        APRHA+LEQ       L    P +   YRL   S  KEAT+ E+
Subjt:  APRHAKLEQA------LKERFPCI---YRL---SMAKEATVFEL

A0A6J1GBB3 nodulin homeobox2.6e-4792.79Show/hide
Query:  MRQFKEELYCNVTQAIDLTSAVKELNKLSSQELSKLLRDSENFAIQYTSENNLQMTIDVEKLACFLPLHLMAVLMSSDRDEALFKYLLCGVRLLHSLCDL
        MRQFKEE Y NVTQAIDL SAVKELNKLSSQELSKLLRDSENFAI Y+SE+N+QMTIDVEKLACFLPLHLMAVLMSSDRDEALFKYLLCGVRLLHSLCDL
Subjt:  MRQFKEELYCNVTQAIDLTSAVKELNKLSSQELSKLLRDSENFAIQYTSENNLQMTIDVEKLACFLPLHLMAVLMSSDRDEALFKYLLCGVRLLHSLCDL

Query:  APRHAKLEQAL
        APRHAKLEQ L
Subjt:  APRHAKLEQAL

A0A6J1K739 nodulin homeobox1.7e-4690.99Show/hide
Query:  MRQFKEELYCNVTQAIDLTSAVKELNKLSSQELSKLLRDSENFAIQYTSENNLQMTIDVEKLACFLPLHLMAVLMSSDRDEALFKYLLCGVRLLHSLCDL
        MRQFKEE Y NVTQAID+ SAVKELN LSSQELSKLLRDSENFAI Y+SE+N+QMTIDVEKLACFLPLHLMAVLMSSDRDEALFKYLLCGVRLLHSLCDL
Subjt:  MRQFKEELYCNVTQAIDLTSAVKELNKLSSQELSKLLRDSENFAIQYTSENNLQMTIDVEKLACFLPLHLMAVLMSSDRDEALFKYLLCGVRLLHSLCDL

Query:  APRHAKLEQAL
        APRHAKLEQ L
Subjt:  APRHAKLEQAL

SwissProt top hitse value%identityAlignment
F4JI44 Nodulin homeobox9.7e-1547.87Show/hide
Query:  LTSAVKELNKLSSQELSKLLRDSENFAIQYTSENNLQMTIDVEKLACFLPLHLMAVLMSSDRDEALFKYLLCGVRLLHSLCDLAPRHAKLEQAL
        +  AV  L+  +S E  KLL+D+ +F+I + SE  L   I VEK+   LP HL+AV+M+ ++D    +Y+LCG+RLL +LCDL PR+AKLEQ L
Subjt:  LTSAVKELNKLSSQELSKLLRDSENFAIQYTSENNLQMTIDVEKLACFLPLHLMAVLMSSDRDEALFKYLLCGVRLLHSLCDLAPRHAKLEQAL

Arabidopsis top hitse value%identityAlignment
AT1G60720.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein5.6e-1025.59Show/hide
Query:  LSMAKEATVFELWNGSTWDLNMRRGIFDREMSSWMELVSILPHLNPIGNEDLLQWNLEASGIFSVKSALSALQQKRRLLEEDLCTQIW-EGPIPKRVKFF
        L +   A V E    + W L + R        +  + +S +   +P   ED   W +         SA +    + R  E D    +W +G +PK   F 
Subjt:  LSMAKEATVFELWNGSTWDLNMRRGIFDREMSSWMELVSILPHLNPIGNEDLLQWNLEASGIFSVKSALSALQQKRRLLEEDLCTQIW-EGPIPKRVKFF

Query:  LWTLALNDINTMDKVQSRFPSLQISPNVCVMCMKQEESASHLLLHCEFAAKVWN-RFGEVFGIQ--ICKPLSVVSWLIEALEGGGLKGKARVLWRNSIRA
        +W   L+ + T  ++ S      I    C +C  + ES  HLL  CEFAA+VW   F  +   Q   C    ++SW+  +           +L + S  A
Subjt:  LWTLALNDINTMDKVQSRFPSLQISPNVCVMCMKQEESASHLLLHCEFAAKVWN-RFGEVFGIQ--ICKPLSVVSWLIEALEGGGLKGKARVLWRNSIRA

Query:  IIWHLWKERNS
        II+++W++RN+
Subjt:  IIWHLWKERNS

AT3G09510.1 Ribonuclease H-like superfamily protein1.8e-0823.73Show/hide
Query:  DLLQWNLEASGIFSVKSA-----------LSALQQKRRLLEEDLCTQIWEGPIPKRVKFFLWTLALNDINTMDKVQSRFPSLQISPNVCVMCMKQEESAS
        D + WN   +G ++V+S            + A+      +  DL T+IW  PI  ++K FLW      + T +++ +R   ++I P+ C  C ++ ES +
Subjt:  DLLQWNLEASGIFSVKSA-----------LSALQQKRRLLEEDLCTQIWEGPIPKRVKFFLWTLALNDINTMDKVQSRFPSLQISPNVCVMCMKQEESAS

Query:  HLLLHCEFAAKVWNRF------GEVFGIQICKPLSVVSWLIEALEGGGLKGKARVLWRNSIRAIIWHLWKERNSRIF
        H L  C FA   W          ++      + +S +   ++         K   +W      +IW +WK RN+ +F
Subjt:  HLLLHCEFAAKVWNRF------GEVFGIQICKPLSVVSWLIEALEGGGLKGKARVLWRNSIRAIIWHLWKERNSRIF

AT3G25270.1 Ribonuclease H-like superfamily protein6.2e-0924.67Show/hide
Query:  DLCTQIWEGPIPKRVKFFLWTLALNDINTMDKVQSRFPSLQISPNVCVMCMKQEESASHLLLHCEFAAKVWNRFGEVFGIQICKPLSVVSWLIEALEGGG
        ++  +IW+     ++K FLW L    + T D ++ R   ++  P  C  C +++E++ HL   C +A +VW   G +   ++      +   +E L    
Subjt:  DLCTQIWEGPIPKRVKFFLWTLALNDINTMDKVQSRFPSLQISPNVCVMCMKQEESASHLLLHCEFAAKVWNRFGEVFGIQICKPLSVVSWLIEALEGGG

Query:  LKGKARVLWRNSIRAIIWHLWKERNSRIFADKSLPFNIFCDSVQLSASNW
        L  +   L+  +I  I+W LWK RN  +F  KS+ +       +     W
Subjt:  LKGKARVLWRNSIRAIIWHLWKERNSRIFADKSLPFNIFCDSVQLSASNW

AT4G03090.1 sequence-specific DNA binding;sequence-specific DNA binding transcription factors6.9e-1647.87Show/hide
Query:  LTSAVKELNKLSSQELSKLLRDSENFAIQYTSENNLQMTIDVEKLACFLPLHLMAVLMSSDRDEALFKYLLCGVRLLHSLCDLAPRHAKLEQAL
        +  AV  L+  +S E  KLL+D+ +F+I + SE  L   I VEK+   LP HL+AV+M+ ++D    +Y+LCG+RLL +LCDL PR+AKLEQ L
Subjt:  LTSAVKELNKLSSQELSKLLRDSENFAIQYTSENNLQMTIDVEKLACFLPLHLMAVLMSSDRDEALFKYLLCGVRLLHSLCDLAPRHAKLEQAL

AT4G03090.2 sequence-specific DNA binding;sequence-specific DNA binding transcription factors6.9e-1647.87Show/hide
Query:  LTSAVKELNKLSSQELSKLLRDSENFAIQYTSENNLQMTIDVEKLACFLPLHLMAVLMSSDRDEALFKYLLCGVRLLHSLCDLAPRHAKLEQAL
        +  AV  L+  +S E  KLL+D+ +F+I + SE  L   I VEK+   LP HL+AV+M+ ++D    +Y+LCG+RLL +LCDL PR+AKLEQ L
Subjt:  LTSAVKELNKLSSQELSKLLRDSENFAIQYTSENNLQMTIDVEKLACFLPLHLMAVLMSSDRDEALFKYLLCGVRLLHSLCDLAPRHAKLEQAL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCAGCTGAATTACTCTGCTTTCTGGGTGGGTCTAACTTTCAAGCAGGCATTGTATTCTGGAAATCTAAATTTTCAAGGATGAGGCAATTTAAGGAGGAATTATATTGCAA
CGTCACACAAGCCATTGACTTAACGTCAGCGGTAAAGGAATTAAATAAATTAAGTTCTCAGGAACTTAGTAAACTATTGAGGGACTCCGAGAATTTTGCAATACAATACA
CTTCTGAAAACAACTTGCAGATGACGATTGACGTAGAAAAGCTTGCATGCTTCCTTCCTTTGCACCTCATGGCTGTTCTTATGTCATCTGACAGAGATGAGGCATTGTTC
AAATATCTGCTATGTGGTGTGCGGCTCTTGCATTCCCTATGTGATTTAGCACCCCGACATGCTAAACTTGAGCAGGCCTTAAAGGAAAGGTTTCCTTGTATCTATCGCCT
CTCTATGGCCAAGGAGGCAACAGTCTTTGAGCTTTGGAATGGTAGCACTTGGGATCTTAATATGAGGAGGGGTATCTTTGACAGAGAAATGAGCAGTTGGATGGAGTTGG
TTTCTATCCTCCCCCATCTCAACCCTATCGGTAATGAAGACTTGCTTCAATGGAATCTAGAAGCCTCAGGGATTTTTTCTGTTAAATCAGCCCTCTCGGCCCTTCAGCAG
AAGAGAAGACTGTTGGAGGAAGACTTGTGCACTCAGATTTGGGAAGGCCCGATCCCTAAGAGGGTTAAATTTTTCTTATGGACCTTGGCCTTAAACGATATTAATACTAT
GGATAAAGTTCAAAGCAGATTCCCCTCCCTTCAAATATCTCCCAACGTTTGTGTGATGTGTATGAAGCAGGAGGAATCTGCCTCCCATCTCCTGTTACATTGTGAATTTG
CTGCTAAGGTCTGGAACAGATTCGGGGAAGTTTTCGGTATTCAGATCTGTAAACCGCTCAGTGTGGTCAGCTGGTTGATAGAAGCCCTCGAAGGAGGTGGTTTGAAAGGA
AAAGCTAGAGTTCTGTGGCGTAATAGCATTAGAGCGATCATTTGGCATCTATGGAAGGAAAGAAATTCGAGAATTTTTGCTGATAAGTCCTTACCCTTTAATATTTTTTG
TGACAGTGTACAGCTCTCGGCCTCTAATTGGAGTGCCCTAGATAAGGCTTTCTCTAATTACTCTGTGGCCATGATTAACCTTCAATGGAAGGCGTTTTTGTAG
mRNA sequenceShow/hide mRNA sequence
TCAGCTGAATTACTCTGCTTTCTGGGTGGGTCTAACTTTCAAGCAGGCATTGTATTCTGGAAATCTAAATTTTCAAGGATGAGGCAATTTAAGGAGGAATTATATTGCAA
CGTCACACAAGCCATTGACTTAACGTCAGCGGTAAAGGAATTAAATAAATTAAGTTCTCAGGAACTTAGTAAACTATTGAGGGACTCCGAGAATTTTGCAATACAATACA
CTTCTGAAAACAACTTGCAGATGACGATTGACGTAGAAAAGCTTGCATGCTTCCTTCCTTTGCACCTCATGGCTGTTCTTATGTCATCTGACAGAGATGAGGCATTGTTC
AAATATCTGCTATGTGGTGTGCGGCTCTTGCATTCCCTATGTGATTTAGCACCCCGACATGCTAAACTTGAGCAGGCCTTAAAGGAAAGGTTTCCTTGTATCTATCGCCT
CTCTATGGCCAAGGAGGCAACAGTCTTTGAGCTTTGGAATGGTAGCACTTGGGATCTTAATATGAGGAGGGGTATCTTTGACAGAGAAATGAGCAGTTGGATGGAGTTGG
TTTCTATCCTCCCCCATCTCAACCCTATCGGTAATGAAGACTTGCTTCAATGGAATCTAGAAGCCTCAGGGATTTTTTCTGTTAAATCAGCCCTCTCGGCCCTTCAGCAG
AAGAGAAGACTGTTGGAGGAAGACTTGTGCACTCAGATTTGGGAAGGCCCGATCCCTAAGAGGGTTAAATTTTTCTTATGGACCTTGGCCTTAAACGATATTAATACTAT
GGATAAAGTTCAAAGCAGATTCCCCTCCCTTCAAATATCTCCCAACGTTTGTGTGATGTGTATGAAGCAGGAGGAATCTGCCTCCCATCTCCTGTTACATTGTGAATTTG
CTGCTAAGGTCTGGAACAGATTCGGGGAAGTTTTCGGTATTCAGATCTGTAAACCGCTCAGTGTGGTCAGCTGGTTGATAGAAGCCCTCGAAGGAGGTGGTTTGAAAGGA
AAAGCTAGAGTTCTGTGGCGTAATAGCATTAGAGCGATCATTTGGCATCTATGGAAGGAAAGAAATTCGAGAATTTTTGCTGATAAGTCCTTACCCTTTAATATTTTTTG
TGACAGTGTACAGCTCTCGGCCTCTAATTGGAGTGCCCTAGATAAGGCTTTCTCTAATTACTCTGTGGCCATGATTAACCTTCAATGGAAGGCGTTTTTGTAG
Protein sequenceShow/hide protein sequence
SAELLCFLGGSNFQAGIVFWKSKFSRMRQFKEELYCNVTQAIDLTSAVKELNKLSSQELSKLLRDSENFAIQYTSENNLQMTIDVEKLACFLPLHLMAVLMSSDRDEALF
KYLLCGVRLLHSLCDLAPRHAKLEQALKERFPCIYRLSMAKEATVFELWNGSTWDLNMRRGIFDREMSSWMELVSILPHLNPIGNEDLLQWNLEASGIFSVKSALSALQQ
KRRLLEEDLCTQIWEGPIPKRVKFFLWTLALNDINTMDKVQSRFPSLQISPNVCVMCMKQEESASHLLLHCEFAAKVWNRFGEVFGIQICKPLSVVSWLIEALEGGGLKG
KARVLWRNSIRAIIWHLWKERNSRIFADKSLPFNIFCDSVQLSASNWSALDKAFSNYSVAMINLQWKAFL