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Spg005757 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg005757
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Description28S ribosomal protein S29, mitochondrial
Genome locationscaffold11:390127..391381
RNA-Seq ExpressionSpg005757
SyntenySpg005757
Gene Ontology termsGO:0005763 - mitochondrial small ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607352.1 28S ribosomal protein S29, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]8.4e-1388.37Show/hide
Query:  VDHFLDRQRLIRREAFSEDAWKKIYYLSNGNGAEMRWLVPLMR
        V H+  RQRLIRREAFSEDAWKK+YYLSNGNGAEMRWLVPLMR
Subjt:  VDHFLDRQRLIRREAFSEDAWKKIYYLSNGNGAEMRWLVPLMR
KAG7037027.1 28S ribosomal protein S29, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]8.4e-1388.37Show/hide
Query:  VDHFLDRQRLIRREAFSEDAWKKIYYLSNGNGAEMRWLVPLMR
        V H+  RQRLIRREAFSEDAWKK+YYLSNGNGAEMRWLVPLMR
Subjt:  VDHFLDRQRLIRREAFSEDAWKKIYYLSNGNGAEMRWLVPLMR
XP_022154896.1 28S ribosomal protein S29, mitochondrial [Momordica charantia]1.4e-1288.37Show/hide
Query:  VDHFLDRQRLIRREAFSEDAWKKIYYLSNGNGAEMRWLVPLMR
        V H+  RQRLIRREAF+EDAWKKIYYLSNGNGAEMRWLVPLMR
Subjt:  VDHFLDRQRLIRREAFSEDAWKKIYYLSNGNGAEMRWLVPLMR
XP_022949341.1 uncharacterized protein LOC111452726 [Cucurbita moschata]8.4e-1388.37Show/hide
Query:  VDHFLDRQRLIRREAFSEDAWKKIYYLSNGNGAEMRWLVPLMR
        V H+  RQRLIRREAFSEDAWKK+YYLSNGNGAEMRWLVPLMR
Subjt:  VDHFLDRQRLIRREAFSEDAWKKIYYLSNGNGAEMRWLVPLMR
XP_023525695.1 uncharacterized protein LOC111789228 [Cucurbita pepo subsp. pepo]8.4e-1388.37Show/hide
Query:  VDHFLDRQRLIRREAFSEDAWKKIYYLSNGNGAEMRWLVPLMR
        V H+  RQRLIRREAFSEDAWKK+YYLSNGNGAEMRWLVPLMR
Subjt:  VDHFLDRQRLIRREAFSEDAWKKIYYLSNGNGAEMRWLVPLMR
TrEMBL top hitse value%identityAlignment
A0A0A0KG66 Uncharacterized protein9.0e-1388.37Show/hide
Query:  VDHFLDRQRLIRREAFSEDAWKKIYYLSNGNGAEMRWLVPLMR
        V H+  RQRLIRREAFSEDAWKKIYYLSNGNGAEMRWL PLMR
Subjt:  VDHFLDRQRLIRREAFSEDAWKKIYYLSNGNGAEMRWLVPLMR
A0A0A0LVC2 Uncharacterized protein2.6e-1286.05Show/hide
Query:  VDHFLDRQRLIRREAFSEDAWKKIYYLSNGNGAEMRWLVPLMR
        V H+  RQRLIRREAFSED WKKIYYLSNGNGAEMRWL PLMR
Subjt:  VDHFLDRQRLIRREAFSEDAWKKIYYLSNGNGAEMRWLVPLMR
A0A5B7B8V1 Uncharacterized protein (Fragment)2.0e-1286.05Show/hide
Query:  VDHFLDRQRLIRREAFSEDAWKKIYYLSNGNGAEMRWLVPLMR
        V H+  RQRLIRREAFSED+WKKIYYLSNGNGAEMRWLVP MR
Subjt:  VDHFLDRQRLIRREAFSEDAWKKIYYLSNGNGAEMRWLVPLMR
A0A6J1DQ31 28S ribosomal protein S29, mitochondrial6.9e-1388.37Show/hide
Query:  VDHFLDRQRLIRREAFSEDAWKKIYYLSNGNGAEMRWLVPLMR
        V H+  RQRLIRREAF+EDAWKKIYYLSNGNGAEMRWLVPLMR
Subjt:  VDHFLDRQRLIRREAFSEDAWKKIYYLSNGNGAEMRWLVPLMR
A0A6J1GBS0 uncharacterized protein LOC1114527264.0e-1388.37Show/hide
Query:  VDHFLDRQRLIRREAFSEDAWKKIYYLSNGNGAEMRWLVPLMR
        V H+  RQRLIRREAFSEDAWKK+YYLSNGNGAEMRWLVPLMR
Subjt:  VDHFLDRQRLIRREAFSEDAWKKIYYLSNGNGAEMRWLVPLMR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G16870.1 mitochondrial 28S ribosomal protein S29-related6.8e-1369.77Show/hide
Query:  VDHFLDRQRLIRREAFSEDAWKKIYYLSNGNGAEMRWLVPLMR
        V ++  RQRL+RRE F+E+ WKKIYYL+NGNGAEMRWL P MR
Subjt:  VDHFLDRQRLIRREAFSEDAWKKIYYLSNGNGAEMRWLVPLMR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCATCGGAGTTGGGCCTCGGGGAGGGAAGAGATTAGTGTTACCACTCAACGATCTCCTCCTCAGTGAGGTAGTTACGTACTTTCCAGTTGACAGGGACACTGATAA
CTGTAAAGGTAAGACCTTGATCATATCCTTTCGCAAGACAATTATTAGCTCACGCACTCTTTTTTATACAAATGTTGCATTGTGGGGTGCTTTGAGATTGTTACATAAGT
TTGTGGATTCTATTCGGAAAACGAACTCTAGAATGCTTTGCTTAATTGTTGATCATTTTCTTGACAGACAAAGACTGATACGCCGTGAAGCCTTCTCAGAGGATGCCTGG
AAAAAGATATATTATTTGTCGAATGGAAATGGAGCAGAGATGCGGTGGTTGGTACCATTGATGCGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTCATCGGAGTTGGGCCTCGGGGAGGGAAGAGATTAGTGTTACCACTCAACGATCTCCTCCTCAGTGAGGTAGTTACGTACTTTCCAGTTGACAGGGACACTGATAA
CTGTAAAGGTAAGACCTTGATCATATCCTTTCGCAAGACAATTATTAGCTCACGCACTCTTTTTTATACAAATGTTGCATTGTGGGGTGCTTTGAGATTGTTACATAAGT
TTGTGGATTCTATTCGGAAAACGAACTCTAGAATGCTTTGCTTAATTGTTGATCATTTTCTTGACAGACAAAGACTGATACGCCGTGAAGCCTTCTCAGAGGATGCCTGG
AAAAAGATATATTATTTGTCGAATGGAAATGGAGCAGAGATGCGGTGGTTGGTACCATTGATGCGGTGA
Protein sequenceShow/hide protein sequence
MVIGVGPRGGKRLVLPLNDLLLSEVVTYFPVDRDTDNCKGKTLIISFRKTIISSRTLFYTNVALWGALRLLHKFVDSIRKTNSRMLCLIVDHFLDRQRLIRREAFSEDAW
KKIYYLSNGNGAEMRWLVPLMR