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Spg005775 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg005775
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionextensin-like
Genome locationscaffold11:892191..893151
RNA-Seq ExpressionSpg005775
SyntenySpg005775
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031838.1 hypothetical protein E6C27_scaffold848G00880 [Cucumis melo var. makuwa]1.4e-0756.92Show/hide
Query:  FKARLCLFLMLLSFALACSARITPHSASGKQTMTVVIDDYADPGANPSHDPNQPTTPPPPLRFEL
        FKARL    +LLSFAL  SARI PHS +  Q    +I+DY DPGANP HDP     PPPP +FE+
Subjt:  FKARLCLFLMLLSFALACSARITPHSASGKQTMTVVIDDYADPGANPSHDPNQPTTPPPPLRFEL

KGN65816.1 hypothetical protein Csa_023196 [Cucumis sativus]5.2e-0757.89Show/hide
Query:  MDF-KARLCLFLMLLSFALACSARITPHSASGKQTMTVVIDDYADPGANPSHDPNQPTTPPPPLR--FELLTDRSR
        MD+ KARL LFL LLSFALA SARI PHS +  Q  T +++DY+DPGANP HDP      PPPL   FE+   R R
Subjt:  MDF-KARLCLFLMLLSFALACSARITPHSASGKQTMTVVIDDYADPGANPSHDPNQPTTPPPPLR--FELLTDRSR

XP_022998671.1 extensin-like [Cucurbita maxima]1.8e-0756.72Show/hide
Query:  MDFKARLCLFLMLLSFALACSARITPHSASGKQTMTVVIDDYADPGANPSHDPNQPTT-PPPPLRFE
        M+FKARLCL + LLSFAL  SA+I   S SGKQ   +VI+DY+DPG NP+  P  P   PPPP  F+
Subjt:  MDFKARLCLFLMLLSFALACSARITPHSASGKQTMTVVIDDYADPGANPSHDPNQPTT-PPPPLRFE

XP_023525538.1 uncharacterized protein LOC111789123 isoform X1 [Cucurbita pepo subsp. pepo]5.2e-0756.06Show/hide
Query:  MDFKARLCLFLMLLSFALACSARITPHSASGKQTMTVVIDDYADPGANPSHDPNQPTTPPPPLRFE
        M+FKARLCL + LLSFAL  S+RI   S SG Q   +VI+DY D G NPSH P  P+   PP +FE
Subjt:  MDFKARLCLFLMLLSFALACSARITPHSASGKQTMTVVIDDYADPGANPSHDPNQPTTPPPPLRFE

XP_038895781.1 circumsporozoite protein-like [Benincasa hispida]1.2e-0872.22Show/hide
Query:  FKARLCLFLMLLSFALACSARITPHSASGKQTMTVVIDDYADPGANPSHDPNQP
        FKARL  FL LLSFAL   ARITPHS S  Q  T+ I+DYADPGANP HDPNQP
Subjt:  FKARLCLFLMLLSFALACSARITPHSASGKQTMTVVIDDYADPGANPSHDPNQP

TrEMBL top hitse value%identityAlignment
A0A0A0M0T8 Uncharacterized protein2.5e-0757.89Show/hide
Query:  MDF-KARLCLFLMLLSFALACSARITPHSASGKQTMTVVIDDYADPGANPSHDPNQPTTPPPPLR--FELLTDRSR
        MD+ KARL LFL LLSFALA SARI PHS +  Q  T +++DY+DPGANP HDP      PPPL   FE+   R R
Subjt:  MDF-KARLCLFLMLLSFALACSARITPHSASGKQTMTVVIDDYADPGANPSHDPNQPTTPPPPLR--FELLTDRSR

A0A5A7SMH7 Uncharacterized protein6.6e-0856.92Show/hide
Query:  FKARLCLFLMLLSFALACSARITPHSASGKQTMTVVIDDYADPGANPSHDPNQPTTPPPPLRFEL
        FKARL    +LLSFAL  SARI PHS +  Q    +I+DY DPGANP HDP     PPPP +FE+
Subjt:  FKARLCLFLMLLSFALACSARITPHSASGKQTMTVVIDDYADPGANPSHDPNQPTTPPPPLRFEL

A0A5A7SPC6 Protein PSY32.1e-0650Show/hide
Query:  MDF-KARLCLFLMLLSFALACSARITPHSASGKQTMTVVIDDYADPGANPSHDPNQPTTPPPPLRFELLTDRSRKDDVNM
        MD+ KARL LFL LLSF L  SARI PHS +  Q    +I+DY DPGANP HDP     PPP  +FE+   +  +   N+
Subjt:  MDF-KARLCLFLMLLSFALACSARITPHSASGKQTMTVVIDDYADPGANPSHDPNQPTTPPPPLRFELLTDRSRKDDVNM

A0A6J1GAA0 extensin-like isoform X12.5e-0756.72Show/hide
Query:  MDFKARLCLFLMLLSFALACSARITPHSASGKQTMTVVIDDYADPGANPSHDPNQPTT-PPPPLRFE
        M+FK  LCL + LLSFAL  SARI   S SGKQ   +VI+DY+DPG NP+  P  P   PPPP  FE
Subjt:  MDFKARLCLFLMLLSFALACSARITPHSASGKQTMTVVIDDYADPGANPSHDPNQPTT-PPPPLRFE

A0A6J1KAU3 extensin-like8.6e-0856.72Show/hide
Query:  MDFKARLCLFLMLLSFALACSARITPHSASGKQTMTVVIDDYADPGANPSHDPNQPTT-PPPPLRFE
        M+FKARLCL + LLSFAL  SA+I   S SGKQ   +VI+DY+DPG NP+  P  P   PPPP  F+
Subjt:  MDFKARLCLFLMLLSFALACSARITPHSASGKQTMTVVIDDYADPGANPSHDPNQPTT-PPPPLRFE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACCTCACTTCACATCTCCATTCCCAATCTTTCAAAGAATCACAAAGGAACAACATGGATTTTAAAGCTCGTCTTTGCCTCTTCTTGATGTTGCTCTCGTTTGCCCT
CGCTTGCTCGGCTCGGATCACGCCCCATTCAGCTTCAGGAAAGCAAACGATGACGGTTGTAATAGACGACTATGCTGATCCTGGAGCAAATCCAAGTCATGATCCAAACC
AACCAACGACGCCACCACCACCCTTGCGGTTTGAGCTTCTAACTGACAGGAGTCGGAAGGATGACGTCAACATGGAGCCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGACCTCACTTCACATCTCCATTCCCAATCTTTCAAAGAATCACAAAGGAACAACATGGATTTTAAAGCTCGTCTTTGCCTCTTCTTGATGTTGCTCTCGTTTGCCCT
CGCTTGCTCGGCTCGGATCACGCCCCATTCAGCTTCAGGAAAGCAAACGATGACGGTTGTAATAGACGACTATGCTGATCCTGGAGCAAATCCAAGTCATGATCCAAACC
AACCAACGACGCCACCACCACCCTTGCGGTTTGAGCTTCTAACTGACAGGAGTCGGAAGGATGACGTCAACATGGAGCCATGA
Protein sequenceShow/hide protein sequence
MDLTSHLHSQSFKESQRNNMDFKARLCLFLMLLSFALACSARITPHSASGKQTMTVVIDDYADPGANPSHDPNQPTTPPPPLRFELLTDRSRKDDVNMEP