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Spg005787 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg005787
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionPMR5N domain-containing protein
Genome locationscaffold11:848187..848453
RNA-Seq ExpressionSpg005787
SyntenySpg005787
Gene Ontology termsGO:0005794 - Golgi apparatus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0016413 - O-acetyltransferase activity (molecular function)
InterPro domainsIPR026057 - PC-Esterase
IPR029962 - Trichome birefringence-like family
IPR029981 - PMR5


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060037.1 protein PMR5-like [Cucumis melo var. makuwa]1.8e-4393.18Show/hide
Query:  MGGTTYPGGYPIQMRIVDEVLRDMRNPVYLLDITMLSELRKDGHPSIYSGDLNPEQRANPDRSADCSHWCLPGLPDTWNQLFYTALFF
        MGGTTYPG YPIQMR+VDEV+R+MR PVYLLDITMLSELRKDGHPSIYSGDLNP+QRANPDRSADCSHWCLPGLPDTWNQLFYTALFF
Subjt:  MGGTTYPGGYPIQMRIVDEVLRDMRNPVYLLDITMLSELRKDGHPSIYSGDLNPEQRANPDRSADCSHWCLPGLPDTWNQLFYTALFF

KAE8653286.1 hypothetical protein Csa_023198 [Cucumis sativus]3.6e-4494.32Show/hide
Query:  MGGTTYPGGYPIQMRIVDEVLRDMRNPVYLLDITMLSELRKDGHPSIYSGDLNPEQRANPDRSADCSHWCLPGLPDTWNQLFYTALFF
        MGGTTYPGGYPIQMR+VDEV+R+MR PVYLLDITMLSELRKDGHPSIYSGDLNP+QRANPDRSADCSHWCLPGLPDTWNQLFYTALFF
Subjt:  MGGTTYPGGYPIQMRIVDEVLRDMRNPVYLLDITMLSELRKDGHPSIYSGDLNPEQRANPDRSADCSHWCLPGLPDTWNQLFYTALFF

KAG6607318.1 Protein PMR5, partial [Cucurbita argyrosperma subsp. sororia]3.0e-4394.32Show/hide
Query:  MGGTTYPGGYPIQMRIVDEVLRDMRNPVYLLDITMLSELRKDGHPSIYSGDLNPEQRANPDRSADCSHWCLPGLPDTWNQLFYTALFF
        MGG TYPGGYPIQMR+VDEVL DMRNPVYLLDITMLSELRKDGHPSIYSGDL+PEQRANP RSADCSHWCLPGLPDTWNQLFYTALFF
Subjt:  MGGTTYPGGYPIQMRIVDEVLRDMRNPVYLLDITMLSELRKDGHPSIYSGDLNPEQRANPDRSADCSHWCLPGLPDTWNQLFYTALFF

XP_004145251.1 protein PMR5 [Cucumis sativus]3.6e-4494.32Show/hide
Query:  MGGTTYPGGYPIQMRIVDEVLRDMRNPVYLLDITMLSELRKDGHPSIYSGDLNPEQRANPDRSADCSHWCLPGLPDTWNQLFYTALFF
        MGGTTYPGGYPIQMR+VDEV+R+MR PVYLLDITMLSELRKDGHPSIYSGDLNP+QRANPDRSADCSHWCLPGLPDTWNQLFYTALFF
Subjt:  MGGTTYPGGYPIQMRIVDEVLRDMRNPVYLLDITMLSELRKDGHPSIYSGDLNPEQRANPDRSADCSHWCLPGLPDTWNQLFYTALFF

XP_008457360.1 PREDICTED: protein PMR5-like [Cucumis melo]1.8e-4393.18Show/hide
Query:  MGGTTYPGGYPIQMRIVDEVLRDMRNPVYLLDITMLSELRKDGHPSIYSGDLNPEQRANPDRSADCSHWCLPGLPDTWNQLFYTALFF
        MGGTTYPG YPIQMR+VDEV+R+MR PVYLLDITMLSELRKDGHPSIYSGDLNP+QRANPDRSADCSHWCLPGLPDTWNQLFYTALFF
Subjt:  MGGTTYPGGYPIQMRIVDEVLRDMRNPVYLLDITMLSELRKDGHPSIYSGDLNPEQRANPDRSADCSHWCLPGLPDTWNQLFYTALFF

TrEMBL top hitse value%identityAlignment
A0A0A0M0U4 PMR5N domain-containing protein1.7e-4494.32Show/hide
Query:  MGGTTYPGGYPIQMRIVDEVLRDMRNPVYLLDITMLSELRKDGHPSIYSGDLNPEQRANPDRSADCSHWCLPGLPDTWNQLFYTALFF
        MGGTTYPGGYPIQMR+VDEV+R+MR PVYLLDITMLSELRKDGHPSIYSGDLNP+QRANPDRSADCSHWCLPGLPDTWNQLFYTALFF
Subjt:  MGGTTYPGGYPIQMRIVDEVLRDMRNPVYLLDITMLSELRKDGHPSIYSGDLNPEQRANPDRSADCSHWCLPGLPDTWNQLFYTALFF

A0A1S3C4W9 protein PMR5-like8.6e-4493.18Show/hide
Query:  MGGTTYPGGYPIQMRIVDEVLRDMRNPVYLLDITMLSELRKDGHPSIYSGDLNPEQRANPDRSADCSHWCLPGLPDTWNQLFYTALFF
        MGGTTYPG YPIQMR+VDEV+R+MR PVYLLDITMLSELRKDGHPSIYSGDLNP+QRANPDRSADCSHWCLPGLPDTWNQLFYTALFF
Subjt:  MGGTTYPGGYPIQMRIVDEVLRDMRNPVYLLDITMLSELRKDGHPSIYSGDLNPEQRANPDRSADCSHWCLPGLPDTWNQLFYTALFF

A0A5D3BE55 Protein PMR5-like8.6e-4493.18Show/hide
Query:  MGGTTYPGGYPIQMRIVDEVLRDMRNPVYLLDITMLSELRKDGHPSIYSGDLNPEQRANPDRSADCSHWCLPGLPDTWNQLFYTALFF
        MGGTTYPG YPIQMR+VDEV+R+MR PVYLLDITMLSELRKDGHPSIYSGDLNP+QRANPDRSADCSHWCLPGLPDTWNQLFYTALFF
Subjt:  MGGTTYPGGYPIQMRIVDEVLRDMRNPVYLLDITMLSELRKDGHPSIYSGDLNPEQRANPDRSADCSHWCLPGLPDTWNQLFYTALFF

A0A6J1GCI1 protein PMR5-like1.5e-4394.32Show/hide
Query:  MGGTTYPGGYPIQMRIVDEVLRDMRNPVYLLDITMLSELRKDGHPSIYSGDLNPEQRANPDRSADCSHWCLPGLPDTWNQLFYTALFF
        MGG TYPGGYPIQMR+VDEVL DMRNPVYLLDITMLSELRKDGHPSIYSGDL+PEQRANP RSADCSHWCLPGLPDTWNQLFYTALFF
Subjt:  MGGTTYPGGYPIQMRIVDEVLRDMRNPVYLLDITMLSELRKDGHPSIYSGDLNPEQRANPDRSADCSHWCLPGLPDTWNQLFYTALFF

A0A6J1KAJ4 protein PMR5-like1.5e-4394.32Show/hide
Query:  MGGTTYPGGYPIQMRIVDEVLRDMRNPVYLLDITMLSELRKDGHPSIYSGDLNPEQRANPDRSADCSHWCLPGLPDTWNQLFYTALFF
        MGG TYPGGYPIQMR+VDEVL DMRNPVYLLDITMLSELRKDGHPSIYSGDL+PEQRANP RSADCSHWCLPGLPDTWNQLFYTALFF
Subjt:  MGGTTYPGGYPIQMRIVDEVLRDMRNPVYLLDITMLSELRKDGHPSIYSGDLNPEQRANPDRSADCSHWCLPGLPDTWNQLFYTALFF

SwissProt top hitse value%identityAlignment
O22960 Protein trichome birefringence-like 378.1e-2361.9Show/hide
Query:  GTTYPGGYPIQMRIVDEVLRDMRNPVYLLDITMLSELRKDGHPSIYSGDLNPEQRANPDRSADCSHWCLPGLPDTWNQLFYTAL
        G+TYPGG      IV  VL  MR PVYLLDIT LS+LRKD HPS Y G          D   DCSHWCLPGLPDTWNQL Y AL
Subjt:  GTTYPGGYPIQMRIVDEVLRDMRNPVYLLDITMLSELRKDGHPSIYSGDLNPEQRANPDRSADCSHWCLPGLPDTWNQLFYTAL

O80872 Protein trichome birefringence-like 453.6e-3167.82Show/hide
Query:  GTTYP-GGYPIQMRIVDEVLRDMRNPVYLLDITMLSELRKDGHPSIYSGDLNPEQRANPDRSADCSHWCLPGLPDTWNQLFYTALFF
        GTTYP   Y  Q +++D+V+++M++ V L+DITMLS LR DGHPSIYSGDLNP  + NPDRS+DCSHWCLPGLPDTWNQLFY AL +
Subjt:  GTTYP-GGYPIQMRIVDEVLRDMRNPVYLLDITMLSELRKDGHPSIYSGDLNPEQRANPDRSADCSHWCLPGLPDTWNQLFYTALFF

Q67XC4 Protein trichome birefringence-like 409.8e-2153.57Show/hide
Query:  GTTYPGGYPIQMRIVDEVLRDMRNPVYLLDITMLSELRKDGHPSIYSGDLNPEQRANPDRSADCSHWCLPGLPDTWNQLFYTAL
        G  YPGG P+   +V++VL  +R PV+LLD+T LSE RKD HPS+Y+G           +  DCSHWCLPGLPDTWN L Y++L
Subjt:  GTTYPGGYPIQMRIVDEVLRDMRNPVYLLDITMLSELRKDGHPSIYSGDLNPEQRANPDRSADCSHWCLPGLPDTWNQLFYTAL

Q8VY22 Protein trichome birefringence-like 381.8e-2256.98Show/hide
Query:  MGGTTYPGGYPIQMRIVDEVLRDMRNPVYLLDITMLSELRKDGHPSIYSGDLNPEQRANPDRSADCSHWCLPGLPDTWNQLFYTAL
        +GG++YP G P    +V +VL  M+ PV LLDIT LS+LRKD HPS Y G          D   DCSHWCLPGLPDTWNQL Y AL
Subjt:  MGGTTYPGGYPIQMRIVDEVLRDMRNPVYLLDITMLSELRKDGHPSIYSGDLNPEQRANPDRSADCSHWCLPGLPDTWNQLFYTAL

Q9LUZ6 Protein PMR53.7e-2864.77Show/hide
Query:  GTTYP-GGYPIQMR-IVDEVLRDMRNPVYLLDITMLSELRKDGHPSIYSGDLNPEQRANPDRSADCSHWCLPGLPDTWNQLFYTALFF
        GT YP   Y  Q+R ++ EVL  M NP +LLDIT+LS LRKDGHPS+YSG ++  QR+ PD+SADCSHWCLPGLPDTWNQL YT L +
Subjt:  GTTYP-GGYPIQMR-IVDEVLRDMRNPVYLLDITMLSELRKDGHPSIYSGDLNPEQRANPDRSADCSHWCLPGLPDTWNQLFYTALFF

Arabidopsis top hitse value%identityAlignment
AT1G29050.1 TRICHOME BIREFRINGENCE-LIKE 381.3e-2356.98Show/hide
Query:  MGGTTYPGGYPIQMRIVDEVLRDMRNPVYLLDITMLSELRKDGHPSIYSGDLNPEQRANPDRSADCSHWCLPGLPDTWNQLFYTAL
        +GG++YP G P    +V +VL  M+ PV LLDIT LS+LRKD HPS Y G          D   DCSHWCLPGLPDTWNQL Y AL
Subjt:  MGGTTYPGGYPIQMRIVDEVLRDMRNPVYLLDITMLSELRKDGHPSIYSGDLNPEQRANPDRSADCSHWCLPGLPDTWNQLFYTAL

AT2G30010.1 TRICHOME BIREFRINGENCE-LIKE 452.6e-3267.82Show/hide
Query:  GTTYP-GGYPIQMRIVDEVLRDMRNPVYLLDITMLSELRKDGHPSIYSGDLNPEQRANPDRSADCSHWCLPGLPDTWNQLFYTALFF
        GTTYP   Y  Q +++D+V+++M++ V L+DITMLS LR DGHPSIYSGDLNP  + NPDRS+DCSHWCLPGLPDTWNQLFY AL +
Subjt:  GTTYP-GGYPIQMRIVDEVLRDMRNPVYLLDITMLSELRKDGHPSIYSGDLNPEQRANPDRSADCSHWCLPGLPDTWNQLFYTALFF

AT2G31110.2 Plant protein of unknown function (DUF828)7.0e-2253.57Show/hide
Query:  GTTYPGGYPIQMRIVDEVLRDMRNPVYLLDITMLSELRKDGHPSIYSGDLNPEQRANPDRSADCSHWCLPGLPDTWNQLFYTAL
        G  YPGG P+   +V++VL  +R PV+LLD+T LSE RKD HPS+Y+G           +  DCSHWCLPGLPDTWN L Y++L
Subjt:  GTTYPGGYPIQMRIVDEVLRDMRNPVYLLDITMLSELRKDGHPSIYSGDLNPEQRANPDRSADCSHWCLPGLPDTWNQLFYTAL

AT2G34070.1 TRICHOME BIREFRINGENCE-LIKE 375.7e-2461.9Show/hide
Query:  GTTYPGGYPIQMRIVDEVLRDMRNPVYLLDITMLSELRKDGHPSIYSGDLNPEQRANPDRSADCSHWCLPGLPDTWNQLFYTAL
        G+TYPGG      IV  VL  MR PVYLLDIT LS+LRKD HPS Y G          D   DCSHWCLPGLPDTWNQL Y AL
Subjt:  GTTYPGGYPIQMRIVDEVLRDMRNPVYLLDITMLSELRKDGHPSIYSGDLNPEQRANPDRSADCSHWCLPGLPDTWNQLFYTAL

AT5G58600.1 Plant protein of unknown function (DUF828)2.7e-2964.77Show/hide
Query:  GTTYP-GGYPIQMR-IVDEVLRDMRNPVYLLDITMLSELRKDGHPSIYSGDLNPEQRANPDRSADCSHWCLPGLPDTWNQLFYTALFF
        GT YP   Y  Q+R ++ EVL  M NP +LLDIT+LS LRKDGHPS+YSG ++  QR+ PD+SADCSHWCLPGLPDTWNQL YT L +
Subjt:  GTTYP-GGYPIQMR-IVDEVLRDMRNPVYLLDITMLSELRKDGHPSIYSGDLNPEQRANPDRSADCSHWCLPGLPDTWNQLFYTALFF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGGGACGACATACCCCGGAGGATACCCTATTCAGATGAGGATTGTGGATGAAGTGCTAAGGGACATGAGGAACCCGGTATACTTGTTGGACATCACAATGTTGTC
TGAACTAAGAAAAGATGGGCACCCCTCCATTTACAGTGGTGATTTGAACCCTGAACAGAGGGCTAACCCTGATAGATCAGCTGATTGTAGCCATTGGTGCCTTCCTGGGT
TACCTGATACTTGGAACCAATTGTTTTATACTGCCTTATTCTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAGGGACGACATACCCCGGAGGATACCCTATTCAGATGAGGATTGTGGATGAAGTGCTAAGGGACATGAGGAACCCGGTATACTTGTTGGACATCACAATGTTGTC
TGAACTAAGAAAAGATGGGCACCCCTCCATTTACAGTGGTGATTTGAACCCTGAACAGAGGGCTAACCCTGATAGATCAGCTGATTGTAGCCATTGGTGCCTTCCTGGGT
TACCTGATACTTGGAACCAATTGTTTTATACTGCCTTATTCTTTTAG
Protein sequenceShow/hide protein sequence
MGGTTYPGGYPIQMRIVDEVLRDMRNPVYLLDITMLSELRKDGHPSIYSGDLNPEQRANPDRSADCSHWCLPGLPDTWNQLFYTALFF