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Spg005843 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg005843
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptioncyclin-dependent protein kinase inhibitor SMR3-like
Genome locationscaffold11:2233652..2234198
RNA-Seq ExpressionSpg005843
SyntenySpg005843
Gene Ontology termsGO:0032875 - regulation of DNA endoreduplication (biological process)
GO:0045839 - negative regulation of mitotic nuclear division (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR040389 - Cyclin-dependent protein kinase inhibitor SMR


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8039043.1 hypothetical protein FH972_011491 [Carpinus fangiana]3.5e-1948.53Show/hide
Query:  MGLFNSSILLSENDVNAMEFTFLL-------------TYVSSKEEEEQQLKDGSK------------PVEDDDNGFKTPTSLEHKIPTSLRCPMAPRKPK
        MG+ +S + LSE D+NAMEF FL+               V  +EEEE++ K   K             VEDD++GFKTPTSL+HKIP  L+CP APRKPK
Subjt:  MGLFNSSILLSENDVNAMEFTFLL-------------TYVSSKEEEEQQLKDGSK------------PVEDDDNGFKTPTSLEHKIPTSLRCPMAPRKPK

Query:  SRPVTKRRKATDRQRILLDLSSEIQSLFPADFLVGL
        + P+TKR+ A  RQRILLDLS++I++LFP   L  L
Subjt:  SRPVTKRRKATDRQRILLDLSSEIQSLFPADFLVGL

KAG6607237.1 hypothetical protein SDJN03_00579, partial [Cucurbita argyrosperma subsp. sororia]7.4e-3878.95Show/hide
Query:  MGLFNSSILLSENDVNAMEFTFLLTYVSSKEEEEQQLKDGSKPVEDDDNGFKTPTSLEHKIPTSLRCPMAPRKPKSRPVTKRRKATDRQRILLDLSSEIQ
        M LFNS+ILLSENDV+AMEFTFLLTY++SK  ++  L   SK VEDDDNGFKTPTSLEHKIP SLRCPMAPRKPKSRP+ K RKA +RQR+ LDLSSEIQ
Subjt:  MGLFNSSILLSENDVNAMEFTFLLTYVSSKEEEEQQLKDGSKPVEDDDNGFKTPTSLEHKIPTSLRCPMAPRKPKSRPVTKRRKATDRQRILLDLSSEIQ

Query:  SLFPADFLVGLGDM
        SLFPADFLVGLG M
Subjt:  SLFPADFLVGLGDM

KAG7036922.1 hypothetical protein SDJN02_00542, partial [Cucurbita argyrosperma subsp. argyrosperma]4.8e-3778.57Show/hide
Query:  MGLFNSSILLSENDVNAMEFTFLLTYVSSKEEEEQQLKDGSKPVEDDDNGFKTPTSLEHKIPTSLRCPMAPRKPKSRPVTKRRKATDRQRILLDLSSEIQ
        M LFNS+ILLSENDV+AMEFTFLLTY++SK  ++  L   SK V+DDDNGFKTPTSLEHKIP SLRCPMAPRKPKSRP+ K RKA +RQR+ LDLSSEIQ
Subjt:  MGLFNSSILLSENDVNAMEFTFLLTYVSSKEEEEQQLKDGSKPVEDDDNGFKTPTSLEHKIPTSLRCPMAPRKPKSRPVTKRRKATDRQRILLDLSSEIQ

Query:  SLFPADFLVGLG
        SLFPADFLVGLG
Subjt:  SLFPADFLVGLG

XP_011658114.1 cyclin-dependent protein kinase inhibitor SMR3 [Cucumis sativus]6.3e-3775.41Show/hide
Query:  MGLFNSSILLSENDVNAMEFTFLLTYVSSKEE------EEQQLKDG-SKPVEDDDNGFKTPTSLEHKIPTSLRCPMAPRKPKSRPVTKRRKATDRQRILL
        MGLFNSSILLSENDVN+MEFTFLL YV+SKE+      +E+ L  G S  VEDDDNGFKTPTSLEHKIPTSL+CPMAPRKPK R +TK RKA +R R+LL
Subjt:  MGLFNSSILLSENDVNAMEFTFLLTYVSSKEE------EEQQLKDG-SKPVEDDDNGFKTPTSLEHKIPTSLRCPMAPRKPKSRPVTKRRKATDRQRILL

Query:  DLSSEIQSLFPADFLVGLGDMI
        DLSSEIQSLFPA+FLVGLG  I
Subjt:  DLSSEIQSLFPADFLVGLGDMI

XP_016902107.1 PREDICTED: cyclin-dependent protein kinase inhibitor SMR3-like [Cucumis melo]2.2e-3469.35Show/hide
Query:  MGL--FNSSILLSENDVNAMEFTFLLTYVSSKEEEEQQLKD-------GSKPVEDDDNGFKTPTSLEHKIPTSLRCPMAPRKPKSRPVTKRRKATDRQRI
        MGL  FNSSILLSENDVN+MEFTFLL YV+SKE+++++ +         +  V+DDDNGFKTPTSLEHKIPTS++CPMAPRKPK R +TK RKA +R R+
Subjt:  MGL--FNSSILLSENDVNAMEFTFLLTYVSSKEEEEQQLKD-------GSKPVEDDDNGFKTPTSLEHKIPTSLRCPMAPRKPKSRPVTKRRKATDRQRI

Query:  LLDLSSEIQSLFPADFLVGLGDMI
        LLDLSSEIQSLFPA+FLVGLG  I
Subjt:  LLDLSSEIQSLFPADFLVGLGDMI

TrEMBL top hitse value%identityAlignment
A0A0A0LY05 Uncharacterized protein3.1e-3775.41Show/hide
Query:  MGLFNSSILLSENDVNAMEFTFLLTYVSSKEE------EEQQLKDG-SKPVEDDDNGFKTPTSLEHKIPTSLRCPMAPRKPKSRPVTKRRKATDRQRILL
        MGLFNSSILLSENDVN+MEFTFLL YV+SKE+      +E+ L  G S  VEDDDNGFKTPTSLEHKIPTSL+CPMAPRKPK R +TK RKA +R R+LL
Subjt:  MGLFNSSILLSENDVNAMEFTFLLTYVSSKEE------EEQQLKDG-SKPVEDDDNGFKTPTSLEHKIPTSLRCPMAPRKPKSRPVTKRRKATDRQRILL

Query:  DLSSEIQSLFPADFLVGLGDMI
        DLSSEIQSLFPA+FLVGLG  I
Subjt:  DLSSEIQSLFPADFLVGLGDMI

A0A1S4E1K5 cyclin-dependent protein kinase inhibitor SMR3-like1.1e-3469.35Show/hide
Query:  MGL--FNSSILLSENDVNAMEFTFLLTYVSSKEEEEQQLKD-------GSKPVEDDDNGFKTPTSLEHKIPTSLRCPMAPRKPKSRPVTKRRKATDRQRI
        MGL  FNSSILLSENDVN+MEFTFLL YV+SKE+++++ +         +  V+DDDNGFKTPTSLEHKIPTS++CPMAPRKPK R +TK RKA +R R+
Subjt:  MGL--FNSSILLSENDVNAMEFTFLLTYVSSKEEEEQQLKD-------GSKPVEDDDNGFKTPTSLEHKIPTSLRCPMAPRKPKSRPVTKRRKATDRQRI

Query:  LLDLSSEIQSLFPADFLVGLGDMI
        LLDLSSEIQSLFPA+FLVGLG  I
Subjt:  LLDLSSEIQSLFPADFLVGLGDMI

A0A5A7VIY0 Cyclin-dependent protein kinase inhibitor SMR3-like1.1e-3469.35Show/hide
Query:  MGL--FNSSILLSENDVNAMEFTFLLTYVSSKEEEEQQLKD-------GSKPVEDDDNGFKTPTSLEHKIPTSLRCPMAPRKPKSRPVTKRRKATDRQRI
        MGL  FNSSILLSENDVN+MEFTFLL YV+SKE+++++ +         +  V+DDDNGFKTPTSLEHKIPTS++CPMAPRKPK R +TK RKA +R R+
Subjt:  MGL--FNSSILLSENDVNAMEFTFLLTYVSSKEEEEQQLKD-------GSKPVEDDDNGFKTPTSLEHKIPTSLRCPMAPRKPKSRPVTKRRKATDRQRI

Query:  LLDLSSEIQSLFPADFLVGLGDMI
        LLDLSSEIQSLFPA+FLVGLG  I
Subjt:  LLDLSSEIQSLFPADFLVGLGDMI

A0A660KRH4 Uncharacterized protein1.7e-1948.53Show/hide
Query:  MGLFNSSILLSENDVNAMEFTFLL-------------TYVSSKEEEEQQLKDGSK------------PVEDDDNGFKTPTSLEHKIPTSLRCPMAPRKPK
        MG+ +S + LSE D+NAMEF FL+               V  +EEEE++ K   K             VEDD++GFKTPTSL+HKIP  L+CP APRKPK
Subjt:  MGLFNSSILLSENDVNAMEFTFLL-------------TYVSSKEEEEQQLKDGSK------------PVEDDDNGFKTPTSLEHKIPTSLRCPMAPRKPK

Query:  SRPVTKRRKATDRQRILLDLSSEIQSLFPADFLVGL
        + P+TKR+ A  RQRILLDLS++I++LFP   L  L
Subjt:  SRPVTKRRKATDRQRILLDLSSEIQSLFPADFLVGL

W9RU29 Uncharacterized protein3.0e-1641.25Show/hide
Query:  ILLSENDVNAMEFTFL----------------LTYVSSKEEEEQQLKDGS------------------------------KPVEDDDN------GFKTPT
        +LLSE D+NA+EF FL                L+  SS EEEE  + D                                + +ED +N      GFKTPT
Subjt:  ILLSENDVNAMEFTFL----------------LTYVSSKEEEEQQLKDGS------------------------------KPVEDDDN------GFKTPT

Query:  SLEHKIPTSLRCPMAPRKPKSRPVTKRRKATDRQRILLDLSSEIQSLFPADFLVGLGDMI
        SL+HKIP +L+CP APRKPKS P TKRR    R+R+LLDL+SEI+SLFP   L  LG  I
Subjt:  SLEHKIPTSLRCPMAPRKPKSRPVTKRRKATDRQRILLDLSSEIQSLFPADFLVGLGDMI

SwissProt top hitse value%identityAlignment
Q9LZ60 Cyclin-dependent protein kinase inhibitor SMR35.6e-0445.07Show/hide
Query:  DGSKPVEDDDNGFKTPTSLEHKIP--TSLRCPMAPRKPK-SRPVTKRRKATD---RQRILLDLSSEIQSLF
        D   P  +++ G KTPTS +HKIP      CP APRKPK +R    +RK T      RI +DLS EI+  F
Subjt:  DGSKPVEDDDNGFKTPTSLEHKIP--TSLRCPMAPRKPK-SRPVTKRRKATD---RQRILLDLSSEIQSLF

Arabidopsis top hitse value%identityAlignment
AT5G02420.1 unknown protein4.0e-0545.07Show/hide
Query:  DGSKPVEDDDNGFKTPTSLEHKIP--TSLRCPMAPRKPK-SRPVTKRRKATD---RQRILLDLSSEIQSLF
        D   P  +++ G KTPTS +HKIP      CP APRKPK +R    +RK T      RI +DLS EI+  F
Subjt:  DGSKPVEDDDNGFKTPTSLEHKIP--TSLRCPMAPRKPK-SRPVTKRRKATD---RQRILLDLSSEIQSLF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCCTCTTCAATTCCAGCATCTTACTCTCTGAAAATGATGTAAACGCCATGGAATTCACTTTTCTTCTCACATATGTAAGTTCCAAAGAAGAAGAAGAACAACAATT
GAAGGATGGAAGTAAACCAGTTGAAGATGATGACAATGGCTTCAAAACTCCCACATCTTTGGAGCATAAAATTCCCACGAGTCTCCGCTGTCCGATGGCGCCGAGGAAAC
CGAAATCTCGGCCGGTGACGAAGCGGAGGAAGGCGACGGACCGACAGCGTATCTTGCTGGATCTGTCCAGTGAGATTCAGTCTTTGTTTCCAGCTGATTTTCTTGTTGGC
CTTGGCGATATGATCTCTCCTCCGGCTGGCCGCCTTCCCCGGTGGCAGCGAGGGGCAACTTGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGCCTCTTCAATTCCAGCATCTTACTCTCTGAAAATGATGTAAACGCCATGGAATTCACTTTTCTTCTCACATATGTAAGTTCCAAAGAAGAAGAAGAACAACAATT
GAAGGATGGAAGTAAACCAGTTGAAGATGATGACAATGGCTTCAAAACTCCCACATCTTTGGAGCATAAAATTCCCACGAGTCTCCGCTGTCCGATGGCGCCGAGGAAAC
CGAAATCTCGGCCGGTGACGAAGCGGAGGAAGGCGACGGACCGACAGCGTATCTTGCTGGATCTGTCCAGTGAGATTCAGTCTTTGTTTCCAGCTGATTTTCTTGTTGGC
CTTGGCGATATGATCTCTCCTCCGGCTGGCCGCCTTCCCCGGTGGCAGCGAGGGGCAACTTGTTAG
Protein sequenceShow/hide protein sequence
MGLFNSSILLSENDVNAMEFTFLLTYVSSKEEEEQQLKDGSKPVEDDDNGFKTPTSLEHKIPTSLRCPMAPRKPKSRPVTKRRKATDRQRILLDLSSEIQSLFPADFLVG
LGDMISPPAGRLPRWQRGATC