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Spg005853 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg005853
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRING-type E3 ubiquitin transferase
Genome locationscaffold11:2106368..2106823
RNA-Seq ExpressionSpg005853
SyntenySpg005853
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607243.1 RING-H2 finger protein ATL52, partial [Cucurbita argyrosperma subsp. sororia]1.2e-3656Show/hide
Query:  MSSPPSFAASPPETAAVADMFGLTLVDEYLALTAICSVIILYFIVFSYYRTRINNVNESESFNAVAGELPTLRENEMVQIEASDFSYREADRSDDSDECA
        M  PPSFAASPP   A+ + +GL   +  LAL AIC +IILY I+ ++++      +E ES +  AG LP +RE E+V+IEAS FSY+EAD   D DECA
Subjt:  MSSPPSFAASPPETAAVADMFGLTLVDEYLALTAICSVIILYFIVFSYYRTRINNVNESESFNAVAGELPTLRENEMVQIEASDFSYREADRSDDSDECA

Query:  ICLNEFKEDQKCRMMKKCGHVFHRSCIDRWLKAERHCPLCRSCVRIVVDP
        ICL+EF++ QKCR M  CGH+FH  CIDRWLK +R CPLCRSCV +VV P
Subjt:  ICLNEFKEDQKCRMMKKCGHVFHRSCIDRWLKAERHCPLCRSCVRIVVDP

KAG7036928.1 RING-H2 finger protein ATL52, partial [Cucurbita argyrosperma subsp. argyrosperma]9.5e-3756.08Show/hide
Query:  MSSPPSFAASPPETAAVADMFGLTLVDEYLALTAICSVIILYFIVFSYYRTRINNVNESESFNAVAGELPTLRENEMVQIEASDFSYREADRSDDSDECA
        M  PPSFAASPP   A+ + +GL   +  LAL AIC ++ILY I+ ++++      +E ES +  AG LP +RE E+V+IEAS FSY+EAD   D DECA
Subjt:  MSSPPSFAASPPETAAVADMFGLTLVDEYLALTAICSVIILYFIVFSYYRTRINNVNESESFNAVAGELPTLRENEMVQIEASDFSYREADRSDDSDECA

Query:  ICLNEFKEDQKCRMMKKCGHVFHRSCIDRWLKAERHCPLCRSCVRIVV
        ICL+EF++ QKCR M  CGH+FHR CIDRWLK +RHCPLCRSCV +V+
Subjt:  ICLNEFKEDQKCRMMKKCGHVFHRSCIDRWLKAERHCPLCRSCVRIVV

XP_022998666.1 RING-H2 finger protein ATL56-like [Cucurbita maxima]5.9e-3958.67Show/hide
Query:  MSSPPSFAASPPETAAVADMFGLTLVDEYLALTAICSVIILYFIVFSYYRTRINNVNESESFNAVAGELPTLRENEMVQIEASDFSYREADRSDDSDECA
        M  PPSFAASPP  +A+   +GL   +  LAL AIC +IILY I+ ++++      +E ES +  AG LP +RE E+V+IEAS FSYREAD   D DECA
Subjt:  MSSPPSFAASPPETAAVADMFGLTLVDEYLALTAICSVIILYFIVFSYYRTRINNVNESESFNAVAGELPTLRENEMVQIEASDFSYREADRSDDSDECA

Query:  ICLNEFKEDQKCRMMKKCGHVFHRSCIDRWLKAERHCPLCRSCVRIVVDP
        ICL+EF++ QKCR M KCGH+FHR CIDRWLK +RHCPLCRSCV +VV P
Subjt:  ICLNEFKEDQKCRMMKKCGHVFHRSCIDRWLKAERHCPLCRSCVRIVVDP

XP_023524566.1 RING-H2 finger protein ATL66-like [Cucurbita pepo subsp. pepo]1.3e-3356.67Show/hide
Query:  MSSPPSFAASPPETAAVADMFGLTLVDEYLALTAICSVIILYFIVFSYYRTRINNVNESESFNAVAGELPTLRENEMVQIEASDFSYREADRSDDSDECA
        M SPPS  ASPP  + + +  GLT  DEYLAL A+C+VIILY IV +  ++R    NES+S     G LP +    +V+IEAS F YREAD      ECA
Subjt:  MSSPPSFAASPPETAAVADMFGLTLVDEYLALTAICSVIILYFIVFSYYRTRINNVNESESFNAVAGELPTLRENEMVQIEASDFSYREADRSDDSDECA

Query:  ICLNEFKEDQKCRMMKKCGHVFHRSCIDRWLKAERHCPLCRSCVRIVVDP
        ICL+ F++ QKCRMM KCGH+FH  CIDRWLK E HCPLCRSCV  VV P
Subjt:  ICLNEFKEDQKCRMMKKCGHVFHRSCIDRWLKAERHCPLCRSCVRIVVDP

XP_023524567.1 RING-H2 finger protein ATL56-like [Cucurbita pepo subsp. pepo]4.6e-3958Show/hide
Query:  MSSPPSFAASPPETAAVADMFGLTLVDEYLALTAICSVIILYFIVFSYYRTRINNVNESESFNAVAGELPTLRENEMVQIEASDFSYREADRSDDSDECA
        M SPPSFAASPP  +A+ + +GL   +  LA+ AIC +IILY I+ ++++      +E ES +  AG LP +RE E+V+IEAS FSY+EAD   D DECA
Subjt:  MSSPPSFAASPPETAAVADMFGLTLVDEYLALTAICSVIILYFIVFSYYRTRINNVNESESFNAVAGELPTLRENEMVQIEASDFSYREADRSDDSDECA

Query:  ICLNEFKEDQKCRMMKKCGHVFHRSCIDRWLKAERHCPLCRSCVRIVVDP
        ICL+EF++ QKCR M KCGH+FHR CIDRWLK +RHCPLCRSCV +VV P
Subjt:  ICLNEFKEDQKCRMMKKCGHVFHRSCIDRWLKAERHCPLCRSCVRIVVDP

TrEMBL top hitse value%identityAlignment
A0A1S3C6H7 RING-H2 finger protein ATL66-like1.2e-3252.15Show/hide
Query:  MSSPPSFAASPPETAAVADMFGLTLVDEYLALTAICSVIILYFIVFS-YYRTRINNVNESESFNAVAGELPTLRE------NEMVQIEASDFSYREADRS
        MSSP   AASP     +  +F     D+Y  + AIC  II+YFI F+ Y++T  N+    +S      ELP  RE       E+VQIEA  FSYREA RS
Subjt:  MSSPPSFAASPPETAAVADMFGLTLVDEYLALTAICSVIILYFIVFS-YYRTRINNVNESESFNAVAGELPTLRE------NEMVQIEASDFSYREADRS

Query:  ------DDSDECAICLNEFKEDQKCRMMKKCGHVFHRSCIDRWLKAERHCPLCRSCVRIVVDP
              DD  EC ICLN+F++ QKCR MKKCGH+FHRSCIDRWLK ER CPLCR+CV +VV P
Subjt:  ------DDSDECAICLNEFKEDQKCRMMKKCGHVFHRSCIDRWLKAERHCPLCRSCVRIVVDP

A0A5A7VPW6 RING-H2 finger protein ATL66-like1.5e-3251.83Show/hide
Query:  MSSPPSFAASPPETAAVADMFGLTLVDEYLALTAICSVIILYFIVFS-YYRTRINNVNESESFNAVAGELPTLRE------NEMVQIEASDFSYREADRS
        MSSP   AASP     +  +F     D+Y  + AIC  II+YFI F+ Y++T  N+    +S      ELP  RE       E+VQIEA  FSYREA RS
Subjt:  MSSPPSFAASPPETAAVADMFGLTLVDEYLALTAICSVIILYFIVFS-YYRTRINNVNESESFNAVAGELPTLRE------NEMVQIEASDFSYREADRS

Query:  -------DDSDECAICLNEFKEDQKCRMMKKCGHVFHRSCIDRWLKAERHCPLCRSCVRIVVDP
               DD  EC ICLN+F++ QKCR MKKCGH+FHRSCIDRWLK ER CPLCR+CV +VV P
Subjt:  -------DDSDECAICLNEFKEDQKCRMMKKCGHVFHRSCIDRWLKAERHCPLCRSCVRIVVDP

A0A5D3BGV5 RING-H2 finger protein ATL66-like1.2e-3252.15Show/hide
Query:  MSSPPSFAASPPETAAVADMFGLTLVDEYLALTAICSVIILYFIVFS-YYRTRINNVNESESFNAVAGELPTLRE------NEMVQIEASDFSYREADRS
        MSSP   AASP     +  +F     D+Y  + AIC  II+YFI F+ Y++T  N+    +S      ELP  RE       E+VQIEA  FSYREA RS
Subjt:  MSSPPSFAASPPETAAVADMFGLTLVDEYLALTAICSVIILYFIVFS-YYRTRINNVNESESFNAVAGELPTLRE------NEMVQIEASDFSYREADRS

Query:  ------DDSDECAICLNEFKEDQKCRMMKKCGHVFHRSCIDRWLKAERHCPLCRSCVRIVVDP
              DD  EC ICLN+F++ QKCR MKKCGH+FHRSCIDRWLK ER CPLCR+CV +VV P
Subjt:  ------DDSDECAICLNEFKEDQKCRMMKKCGHVFHRSCIDRWLKAERHCPLCRSCVRIVVDP

A0A6J1DN25 RING-H2 finger protein ATL1-like8.1e-3455.26Show/hide
Query:  SPPSFAASPPETAAVA------DMFGLTLVDEYLALTAICSVIILYFIVFSYYRTRINNVNESESFNAVAGELPTLRENEMVQIEASDFSYREADRSDDS
        SPPS+ AS P   + +         GL+L+DEY A+TAIC V ILYFI FS Y++R+   NESE      G  P +RE EMV+IEAS F+       DD 
Subjt:  SPPSFAASPPETAAVA------DMFGLTLVDEYLALTAICSVIILYFIVFSYYRTRINNVNESESFNAVAGELPTLRENEMVQIEASDFSYREADRSDDS

Query:  DECAICLNEFKEDQKCRMMKKCGHVFHRSCIDRWLKAERHCPLCRSCVRIVV
        +EC ICL EFK+ +KC +M KC HVFHR+CIDRWLKAERHCPLCRSCV + V
Subjt:  DECAICLNEFKEDQKCRMMKKCGHVFHRSCIDRWLKAERHCPLCRSCVRIVV

A0A6J1KAT3 RING-type E3 ubiquitin transferase2.9e-3958.67Show/hide
Query:  MSSPPSFAASPPETAAVADMFGLTLVDEYLALTAICSVIILYFIVFSYYRTRINNVNESESFNAVAGELPTLRENEMVQIEASDFSYREADRSDDSDECA
        M  PPSFAASPP  +A+   +GL   +  LAL AIC +IILY I+ ++++      +E ES +  AG LP +RE E+V+IEAS FSYREAD   D DECA
Subjt:  MSSPPSFAASPPETAAVADMFGLTLVDEYLALTAICSVIILYFIVFSYYRTRINNVNESESFNAVAGELPTLRENEMVQIEASDFSYREADRSDDSDECA

Query:  ICLNEFKEDQKCRMMKKCGHVFHRSCIDRWLKAERHCPLCRSCVRIVVDP
        ICL+EF++ QKCR M KCGH+FHR CIDRWLK +RHCPLCRSCV +VV P
Subjt:  ICLNEFKEDQKCRMMKKCGHVFHRSCIDRWLKAERHCPLCRSCVRIVVDP

SwissProt top hitse value%identityAlignment
P93823 RING-H2 finger protein ATL15.8e-1345.21Show/hide
Query:  LRENEMVQIEASDFSYREADRSDDSDECAICLNEFKEDQKCRMMKKCGHVFHRSCIDRWLKAERHCPLCRSCV
        +R   + + +  D    E D+S +S EC++CLNEF+ED+K R++  C HVFH  CID WL+   +CPLCR+ V
Subjt:  LRENEMVQIEASDFSYREADRSDDSDECAICLNEFKEDQKCRMMKKCGHVFHRSCIDRWLKAERHCPLCRSCV

Q8LFY8 RING-H2 finger protein ATL544.2e-1126.51Show/hide
Query:  SPPSFAASPPETAAVADMFGLTLVDEYLALTAICSVIILYFIVFSYYRTRINNVNESESFNAVAGELPTLRENEMVQIEASDF-----------------
        SP   A   P   + + +  ++++    A+ AI  ++  +F+V  ++   +N VN+  ++ +   +  T+ E E    E  D                  
Subjt:  SPPSFAASPPETAAVADMFGLTLVDEYLALTAICSVIILYFIVFSYYRTRINNVNESESFNAVAGELPTLRENEMVQIEASDF-----------------

Query:  ----SYREADRSDDSDECAICLNEFKEDQKCRMMKKCGHVFHRSCIDRWLKAERHCPLCRSCVRIV
            +Y+  D   +  +C +CLNEF+ED+  R++ KC H FH SCID WL +  +CPLCR+ + ++
Subjt:  ----SYREADRSDDSDECAICLNEFKEDQKCRMMKKCGHVFHRSCIDRWLKAERHCPLCRSCVRIV

Q9LF64 RING-H2 finger protein ATL521.7e-1227.85Show/hide
Query:  PPSFAASPPETAAVADMFGLTLVDEYLALTAICSVIILYFIVFSYYRTRINNVNESESFN---------AVAGELPTLRE--NEMVQIEASDFSYREADR
        PPSF      +++ +    L +    + +     +++ Y+ + S Y  R +  + SE+ N         +    + T  +  NE +    + + Y+  D 
Subjt:  PPSFAASPPETAAVADMFGLTLVDEYLALTAICSVIILYFIVFSYYRTRINNVNESESFN---------AVAGELPTLRE--NEMVQIEASDFSYREADR

Query:  SDDSDECAICLNEFKEDQKCRMMKKCGHVFHRSCIDRWLKAERHCPLCRSCVRIVVDP
          D  +C++CL+EF+E++  R++ KC H FH  CID WLK+  +CPLCR+ V  V +P
Subjt:  SDDSDECAICLNEFKEDQKCRMMKKCGHVFHRSCIDRWLKAERHCPLCRSCVRIVVDP

Q9LX93 E3 ubiquitin-protein ligase RING14.5e-1330.14Show/hide
Query:  TAIC---SVIILYFIVFSYYRTRINNVNESESFNAVAGELPTLRENEMVQIEASDFS-------------------------YREADRSDDSDECAICLN
        T+IC   S+I+  F+VF  Y   I       + +   G+  T ++ +  + E  DFS                         +++ +   D  EC++CLN
Subjt:  TAIC---SVIILYFIVFSYYRTRINNVNESESFNAVAGELPTLRENEMVQIEASDFS-------------------------YREADRSDDSDECAICLN

Query:  EFKEDQKCRMMKKCGHVFHRSCIDRWLKAERHCPLCRSCVRIVVDP
        EF+ED+  R++ KC H FH +CID WL + ++CPLCR+ V ++ +P
Subjt:  EFKEDQKCRMMKKCGHVFHRSCIDRWLKAERHCPLCRSCVRIVVDP

Q9SRQ8 RING-H2 finger protein ATL512.2e-1234.34Show/hide
Query:  FSYYRTRINNVNESESFNAVAGELPTLRENEMVQIEASDFSYREADRSDDSDECAICLNEFKEDQKCRMMKKCGHVFHRSCIDRWLKAERHCPLCRSCV
        +++  T  NN N + + N   G       +E +    + + YR+ D   +S +C++CL+EF+E++  R++ KC H FH  CID WLK+  +CPLCR+ +
Subjt:  FSYYRTRINNVNESESFNAVAGELPTLRENEMVQIEASDFSYREADRSDDSDECAICLNEFKEDQKCRMMKKCGHVFHRSCIDRWLKAERHCPLCRSCV

Arabidopsis top hitse value%identityAlignment
AT1G04360.1 RING/U-box superfamily protein4.1e-1445.21Show/hide
Query:  LRENEMVQIEASDFSYREADRSDDSDECAICLNEFKEDQKCRMMKKCGHVFHRSCIDRWLKAERHCPLCRSCV
        +R   + + +  D    E D+S +S EC++CLNEF+ED+K R++  C HVFH  CID WL+   +CPLCR+ V
Subjt:  LRENEMVQIEASDFSYREADRSDDSDECAICLNEFKEDQKCRMMKKCGHVFHRSCIDRWLKAERHCPLCRSCV

AT1G72220.1 RING/U-box superfamily protein3.0e-1226.51Show/hide
Query:  SPPSFAASPPETAAVADMFGLTLVDEYLALTAICSVIILYFIVFSYYRTRINNVNESESFNAVAGELPTLRENEMVQIEASDF-----------------
        SP   A   P   + + +  ++++    A+ AI  ++  +F+V  ++   +N VN+  ++ +   +  T+ E E    E  D                  
Subjt:  SPPSFAASPPETAAVADMFGLTLVDEYLALTAICSVIILYFIVFSYYRTRINNVNESESFNAVAGELPTLRENEMVQIEASDF-----------------

Query:  ----SYREADRSDDSDECAICLNEFKEDQKCRMMKKCGHVFHRSCIDRWLKAERHCPLCRSCVRIV
            +Y+  D   +  +C +CLNEF+ED+  R++ KC H FH SCID WL +  +CPLCR+ + ++
Subjt:  ----SYREADRSDDSDECAICLNEFKEDQKCRMMKKCGHVFHRSCIDRWLKAERHCPLCRSCVRIV

AT3G03550.1 RING/U-box superfamily protein1.6e-1334.34Show/hide
Query:  FSYYRTRINNVNESESFNAVAGELPTLRENEMVQIEASDFSYREADRSDDSDECAICLNEFKEDQKCRMMKKCGHVFHRSCIDRWLKAERHCPLCRSCV
        +++  T  NN N + + N   G       +E +    + + YR+ D   +S +C++CL+EF+E++  R++ KC H FH  CID WLK+  +CPLCR+ +
Subjt:  FSYYRTRINNVNESESFNAVAGELPTLRENEMVQIEASDFSYREADRSDDSDECAICLNEFKEDQKCRMMKKCGHVFHRSCIDRWLKAERHCPLCRSCV

AT5G10380.1 RING/U-box superfamily protein3.2e-1430.14Show/hide
Query:  TAIC---SVIILYFIVFSYYRTRINNVNESESFNAVAGELPTLRENEMVQIEASDFS-------------------------YREADRSDDSDECAICLN
        T+IC   S+I+  F+VF  Y   I       + +   G+  T ++ +  + E  DFS                         +++ +   D  EC++CLN
Subjt:  TAIC---SVIILYFIVFSYYRTRINNVNESESFNAVAGELPTLRENEMVQIEASDFS-------------------------YREADRSDDSDECAICLN

Query:  EFKEDQKCRMMKKCGHVFHRSCIDRWLKAERHCPLCRSCVRIVVDP
        EF+ED+  R++ KC H FH +CID WL + ++CPLCR+ V ++ +P
Subjt:  EFKEDQKCRMMKKCGHVFHRSCIDRWLKAERHCPLCRSCVRIVVDP

AT5G17600.1 RING/U-box superfamily protein1.2e-1327.85Show/hide
Query:  PPSFAASPPETAAVADMFGLTLVDEYLALTAICSVIILYFIVFSYYRTRINNVNESESFN---------AVAGELPTLRE--NEMVQIEASDFSYREADR
        PPSF      +++ +    L +    + +     +++ Y+ + S Y  R +  + SE+ N         +    + T  +  NE +    + + Y+  D 
Subjt:  PPSFAASPPETAAVADMFGLTLVDEYLALTAICSVIILYFIVFSYYRTRINNVNESESFN---------AVAGELPTLRE--NEMVQIEASDFSYREADR

Query:  SDDSDECAICLNEFKEDQKCRMMKKCGHVFHRSCIDRWLKAERHCPLCRSCVRIVVDP
          D  +C++CL+EF+E++  R++ KC H FH  CID WLK+  +CPLCR+ V  V +P
Subjt:  SDDSDECAICLNEFKEDQKCRMMKKCGHVFHRSCIDRWLKAERHCPLCRSCVRIVVDP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCATCGCCGCCGTCTTTTGCCGCATCGCCGCCGGAAACTGCCGCCGTTGCCGACATGTTTGGACTGACATTGGTGGATGAGTATTTGGCTCTGACTGCAATTTGTTC
CGTGATCATACTGTACTTCATCGTCTTCAGTTACTACAGAACCAGAATTAATAATGTTAACGAATCCGAATCCTTCAATGCTGTGGCCGGAGAACTTCCGACGTTGCGAG
AGAATGAGATGGTACAGATTGAGGCCTCGGATTTCAGTTACAGGGAAGCTGATCGAAGTGACGATAGCGATGAATGTGCAATTTGCCTTAACGAATTTAAAGAAGACCAA
AAGTGTAGAATGATGAAAAAGTGTGGCCATGTATTTCACCGGAGCTGCATTGACCGGTGGCTCAAGGCGGAGCGGCACTGCCCTCTTTGCCGGAGCTGCGTTCGCATCGT
CGTTGATCCAAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCATCGCCGCCGTCTTTTGCCGCATCGCCGCCGGAAACTGCCGCCGTTGCCGACATGTTTGGACTGACATTGGTGGATGAGTATTTGGCTCTGACTGCAATTTGTTC
CGTGATCATACTGTACTTCATCGTCTTCAGTTACTACAGAACCAGAATTAATAATGTTAACGAATCCGAATCCTTCAATGCTGTGGCCGGAGAACTTCCGACGTTGCGAG
AGAATGAGATGGTACAGATTGAGGCCTCGGATTTCAGTTACAGGGAAGCTGATCGAAGTGACGATAGCGATGAATGTGCAATTTGCCTTAACGAATTTAAAGAAGACCAA
AAGTGTAGAATGATGAAAAAGTGTGGCCATGTATTTCACCGGAGCTGCATTGACCGGTGGCTCAAGGCGGAGCGGCACTGCCCTCTTTGCCGGAGCTGCGTTCGCATCGT
CGTTGATCCAAGATGA
Protein sequenceShow/hide protein sequence
MSSPPSFAASPPETAAVADMFGLTLVDEYLALTAICSVIILYFIVFSYYRTRINNVNESESFNAVAGELPTLRENEMVQIEASDFSYREADRSDDSDECAICLNEFKEDQ
KCRMMKKCGHVFHRSCIDRWLKAERHCPLCRSCVRIVVDPR