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Spg005857 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg005857
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionextensin-like
Genome locationscaffold11:874198..877131
RNA-Seq ExpressionSpg005857
SyntenySpg005857
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031836.1 Protein PSY3 [Cucumis melo var. makuwa]3.1e-0556.72Show/hide
Query:  KARLCLFLMLLSFALACSARITPHSSVSGKRMMAVVIDDYADPGANPRHDPNQSPPPPPPPPLRFEL
        KARL LFL LLSF L  SARI PHS     +  A +I+DY DPGANPRHDP       PPP  +FE+
Subjt:  KARLCLFLMLLSFALACSARITPHSSVSGKRMMAVVIDDYADPGANPRHDPNQSPPPPPPPPLRFEL

KAA0031838.1 hypothetical protein E6C27_scaffold848G00880 [Cucumis melo var. makuwa]1.1e-0750Show/hide
Query:  FKARLCLFLMLLSFALACSARITPHSSVSGKRMMAVVIDDYADPGANPRHDPNQSPPPPPPPPLRFELLTDRSRKDDVNKEP
        FKARL    +LLSFAL  SARI PHS     +  A +I+DY DPGANPRHDP       PPPP +FE+   +    D+ K P
Subjt:  FKARLCLFLMLLSFALACSARITPHSSVSGKRMMAVVIDDYADPGANPRHDPNQSPPPPPPPPLRFELLTDRSRKDDVNKEP

KGN65816.1 hypothetical protein Csa_023196 [Cucumis sativus]2.8e-0649.38Show/hide
Query:  KARLCLFLMLLSFALACSARITPHSSVSGKRMMAVVIDDYADPGANPRHDPNQSPPPPPPPPLRFELLTDRSRKDDVNKEP
        KARL LFL LLSFALA SARI PHS     +    +++DY+DPGANPRHDP        PPPL      +  R   + K P
Subjt:  KARLCLFLMLLSFALACSARITPHSSVSGKRMMAVVIDDYADPGANPRHDPNQSPPPPPPPPLRFELLTDRSRKDDVNKEP

XP_022998671.1 extensin-like [Cucurbita maxima]4.1e-0558.46Show/hide
Query:  MGFKARLCLFLMLLSFALACSARITPHSSVSGKRMMAVVIDDYADPGANPRHD---PNQSPPPPP
        M FKARLCL + LLSFAL  SA+I    SVSGK+   +VI+DY+DPG NP      P Q PPPPP
Subjt:  MGFKARLCLFLMLLSFALACSARITPHSSVSGKRMMAVVIDDYADPGANPRHD---PNQSPPPPP

XP_038895781.1 circumsporozoite protein-like [Benincasa hispida]4.4e-0766.07Show/hide
Query:  FKARLCLFLMLLSFALACSARITPHSSVSGKRMMAVVIDDYADPGANPRHDPNQSP
        FKARL  FL LLSFAL   ARITPHS         + I+DYADPGANPRHDPNQ P
Subjt:  FKARLCLFLMLLSFALACSARITPHSSVSGKRMMAVVIDDYADPGANPRHDPNQSP

TrEMBL top hitse value%identityAlignment
A0A0A0LV67 Uncharacterized protein2.0e-0549.38Show/hide
Query:  KARLCLFLMLLSFALACSARITPHSSVSGKRMMAVVIDDYADPGANPRHDPNQSPPPPPPPPLRFELLTDRSRKDDVNKEP
        KARL L L+LLSF L  SARI PHS     + +A +I+DY DPGANPRH+P      PPPP   FE+     +  D+ K P
Subjt:  KARLCLFLMLLSFALACSARITPHSSVSGKRMMAVVIDDYADPGANPRHDPNQSPPPPPPPPLRFELLTDRSRKDDVNKEP

A0A0A0M0T8 Uncharacterized protein1.4e-0649.38Show/hide
Query:  KARLCLFLMLLSFALACSARITPHSSVSGKRMMAVVIDDYADPGANPRHDPNQSPPPPPPPPLRFELLTDRSRKDDVNKEP
        KARL LFL LLSFALA SARI PHS     +    +++DY+DPGANPRHDP        PPPL      +  R   + K P
Subjt:  KARLCLFLMLLSFALACSARITPHSSVSGKRMMAVVIDDYADPGANPRHDPNQSPPPPPPPPLRFELLTDRSRKDDVNKEP

A0A5A7SMH7 Uncharacterized protein5.6e-0850Show/hide
Query:  FKARLCLFLMLLSFALACSARITPHSSVSGKRMMAVVIDDYADPGANPRHDPNQSPPPPPPPPLRFELLTDRSRKDDVNKEP
        FKARL    +LLSFAL  SARI PHS     +  A +I+DY DPGANPRHDP       PPPP +FE+   +    D+ K P
Subjt:  FKARLCLFLMLLSFALACSARITPHSSVSGKRMMAVVIDDYADPGANPRHDPNQSPPPPPPPPLRFELLTDRSRKDDVNKEP

A0A5A7SPC6 Protein PSY31.5e-0556.72Show/hide
Query:  KARLCLFLMLLSFALACSARITPHSSVSGKRMMAVVIDDYADPGANPRHDPNQSPPPPPPPPLRFEL
        KARL LFL LLSF L  SARI PHS     +  A +I+DY DPGANPRHDP       PPP  +FE+
Subjt:  KARLCLFLMLLSFALACSARITPHSSVSGKRMMAVVIDDYADPGANPRHDPNQSPPPPPPPPLRFEL

A0A6J1KAU3 extensin-like2.0e-0558.46Show/hide
Query:  MGFKARLCLFLMLLSFALACSARITPHSSVSGKRMMAVVIDDYADPGANPRHD---PNQSPPPPP
        M FKARLCL + LLSFAL  SA+I    SVSGK+   +VI+DY+DPG NP      P Q PPPPP
Subjt:  MGFKARLCLFLMLLSFALACSARITPHSSVSGKRMMAVVIDDYADPGANPRHD---PNQSPPPPP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTTTAAAGCTCGTCTTTGCCTCTTCTTGATGTTGCTCTCGTTTGCCCTCGCTTGCTCGGCTCGGATCACGCCCCATTCATCAGTTTCAGGAAAGCGAATGATGGC
GGTTGTGATAGACGACTATGCTGATCCTGGGGCAAATCCAAGACATGATCCAAACCAGTCACCGCCACCGCCACCACCACCGCCACTGCGGTTTGAGCTTCTAACCGACC
GGAGTCGAAAGGATGATGTCAACAAGGAGCCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTTTAAAGCTCGTCTTTGCCTCTTCTTGATGTTGCTCTCGTTTGCCCTCGCTTGCTCGGCTCGGATCACGCCCCATTCATCAGTTTCAGGAAAGCGAATGATGGC
GGTTGTGATAGACGACTATGCTGATCCTGGGGCAAATCCAAGACATGATCCAAACCAGTCACCGCCACCGCCACCACCACCGCCACTGCGGTTTGAGCTTCTAACCGACC
GGAGTCGAAAGGATGATGTCAACAAGGAGCCGTGA
Protein sequenceShow/hide protein sequence
MGFKARLCLFLMLLSFALACSARITPHSSVSGKRMMAVVIDDYADPGANPRHDPNQSPPPPPPPPLRFELLTDRSRKDDVNKEP