; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg005887 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg005887
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionnudC domain-containing protein 2-like
Genome locationscaffold11:1055951..1063163
RNA-Seq ExpressionSpg005887
SyntenySpg005887
Gene Ontology termsGO:0006457 - protein folding (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0051082 - unfolded protein binding (molecular function)
InterPro domainsIPR007052 - CS domain
IPR008978 - HSP20-like chaperone
IPR037898 - NudC family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYJ97316.1 nudC domain-containing protein 2 [Cucumis melo var. makuwa]3.3e-5587.4Show/hide
Query:  MAEKLAPDKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHVE-----------HELTCPVKMDSSFWTLAEDDIMHITLQKRDKGQT
        MAEKLAP+KRHSFLHNGQKVFEWDQTLEEVNIYINLPPNV+SKQFYCKIQSRHVE           HELTCPVK DSSFWTL EDDIMHITLQKRDKGQT
Subjt:  MAEKLAPDKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHVE-----------HELTCPVKMDSSFWTLAEDDIMHITLQKRDKGQT

Query:  WASPIQGQGQLDPYSTDLEQKRLMLQR
        WASPIQGQGQLDPYS+DLEQKRLMLQR
Subjt:  WASPIQGQGQLDPYSTDLEQKRLMLQR

XP_022998001.1 nudC domain-containing protein 2-like [Cucurbita maxima]2.0e-5587.4Show/hide
Query:  MAEKLAPDKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHVE-----------HELTCPVKMDSSFWTLAEDDIMHITLQKRDKGQT
        MAEKLAP+KRHSF+HNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHVE           HELTCPVK DSSFWTL ED IMHITLQKRDKGQT
Subjt:  MAEKLAPDKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHVE-----------HELTCPVKMDSSFWTLAEDDIMHITLQKRDKGQT

Query:  WASPIQGQGQLDPYSTDLEQKRLMLQR
        WASPIQGQGQLDPYSTDLEQKRLMLQR
Subjt:  WASPIQGQGQLDPYSTDLEQKRLMLQR

XP_023523270.1 nudC domain-containing protein 2-like isoform X1 [Cucurbita pepo subsp. pepo]1.5e-6882.53Show/hide
Query:  MAEKLAPDKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHVE-----------HELTCPVKMDSSFWTLAEDDIMHITLQKRDKGQT
        MAEKLAP+KRHSFLHNGQ+VFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHVE           HELTCPVK DSSFWTL ED IMHITLQKRDKGQT
Subjt:  MAEKLAPDKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHVE-----------HELTCPVKMDSSFWTLAEDDIMHITLQKRDKGQT

Query:  WASPIQGQGQLDPYSTDLEQKRLMLQ--------RTLDLTFHKLSFRATVLIQGPSWVEFAQIDKY
        WASPIQGQGQLDPYSTDLEQKRLMLQ        RTLDLT HKLSFRATV IQGPSWVEF QI+ Y
Subjt:  WASPIQGQGQLDPYSTDLEQKRLMLQ--------RTLDLTFHKLSFRATVLIQGPSWVEFAQIDKY

XP_023523271.1 nudC domain-containing protein 2-like isoform X2 [Cucurbita pepo subsp. pepo]3.3e-5587.4Show/hide
Query:  MAEKLAPDKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHVE-----------HELTCPVKMDSSFWTLAEDDIMHITLQKRDKGQT
        MAEKLAP+KRHSFLHNGQ+VFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHVE           HELTCPVK DSSFWTL ED IMHITLQKRDKGQT
Subjt:  MAEKLAPDKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHVE-----------HELTCPVKMDSSFWTLAEDDIMHITLQKRDKGQT

Query:  WASPIQGQGQLDPYSTDLEQKRLMLQR
        WASPIQGQGQLDPYSTDLEQKRLMLQR
Subjt:  WASPIQGQGQLDPYSTDLEQKRLMLQR

XP_038894388.1 nudC domain-containing protein 2 [Benincasa hispida]3.9e-5688.19Show/hide
Query:  MAEKLAPDKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHVE-----------HELTCPVKMDSSFWTLAEDDIMHITLQKRDKGQT
        MAEKLAP+KRHSFLHNGQKVFEWDQTLE+VNIYINLPPNVHSKQFYCKIQSRHVE           HELTCPVK DSSFWTL EDDIMHITLQKRDKGQT
Subjt:  MAEKLAPDKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHVE-----------HELTCPVKMDSSFWTLAEDDIMHITLQKRDKGQT

Query:  WASPIQGQGQLDPYSTDLEQKRLMLQR
        WASPIQGQGQLDPYSTDLEQKRLMLQR
Subjt:  WASPIQGQGQLDPYSTDLEQKRLMLQR

TrEMBL top hitse value%identityAlignment
A0A1S3C618 nudC domain-containing protein 21.6e-5587.4Show/hide
Query:  MAEKLAPDKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHVE-----------HELTCPVKMDSSFWTLAEDDIMHITLQKRDKGQT
        MAEKLAP+KRHSFLHNGQKVFEWDQTLEEVNIYINLPPNV+SKQFYCKIQSRHVE           HELTCPVK DSSFWTL EDDIMHITLQKRDKGQT
Subjt:  MAEKLAPDKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHVE-----------HELTCPVKMDSSFWTLAEDDIMHITLQKRDKGQT

Query:  WASPIQGQGQLDPYSTDLEQKRLMLQR
        WASPIQGQGQLDPYS+DLEQKRLMLQR
Subjt:  WASPIQGQGQLDPYSTDLEQKRLMLQR

A0A5A7SMF6 NudC domain-containing protein 21.6e-5587.4Show/hide
Query:  MAEKLAPDKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHVE-----------HELTCPVKMDSSFWTLAEDDIMHITLQKRDKGQT
        MAEKLAP+KRHSFLHNGQKVFEWDQTLEEVNIYINLPPNV+SKQFYCKIQSRHVE           HELTCPVK DSSFWTL EDDIMHITLQKRDKGQT
Subjt:  MAEKLAPDKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHVE-----------HELTCPVKMDSSFWTLAEDDIMHITLQKRDKGQT

Query:  WASPIQGQGQLDPYSTDLEQKRLMLQR
        WASPIQGQGQLDPYS+DLEQKRLMLQR
Subjt:  WASPIQGQGQLDPYSTDLEQKRLMLQR

A0A5D3BE77 NudC domain-containing protein 21.6e-5587.4Show/hide
Query:  MAEKLAPDKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHVE-----------HELTCPVKMDSSFWTLAEDDIMHITLQKRDKGQT
        MAEKLAP+KRHSFLHNGQKVFEWDQTLEEVNIYINLPPNV+SKQFYCKIQSRHVE           HELTCPVK DSSFWTL EDDIMHITLQKRDKGQT
Subjt:  MAEKLAPDKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHVE-----------HELTCPVKMDSSFWTLAEDDIMHITLQKRDKGQT

Query:  WASPIQGQGQLDPYSTDLEQKRLMLQR
        WASPIQGQGQLDPYS+DLEQKRLMLQR
Subjt:  WASPIQGQGQLDPYSTDLEQKRLMLQR

A0A6J1I2V0 nudC domain-containing protein 2-like3.6e-5586.61Show/hide
Query:  MAEKLAPDKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHVE-----------HELTCPVKMDSSFWTLAEDDIMHITLQKRDKGQT
        MAEKLAP+KRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQS HVE           H LTCPVK DSSFWTL EDDIMHITLQKRDKGQT
Subjt:  MAEKLAPDKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHVE-----------HELTCPVKMDSSFWTLAEDDIMHITLQKRDKGQT

Query:  WASPIQGQGQLDPYSTDLEQKRLMLQR
        WASPIQGQGQLDPY+TDLEQKRLMLQR
Subjt:  WASPIQGQGQLDPYSTDLEQKRLMLQR

A0A6J1K923 nudC domain-containing protein 2-like9.4e-5687.4Show/hide
Query:  MAEKLAPDKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHVE-----------HELTCPVKMDSSFWTLAEDDIMHITLQKRDKGQT
        MAEKLAP+KRHSF+HNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHVE           HELTCPVK DSSFWTL ED IMHITLQKRDKGQT
Subjt:  MAEKLAPDKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHVE-----------HELTCPVKMDSSFWTLAEDDIMHITLQKRDKGQT

Query:  WASPIQGQGQLDPYSTDLEQKRLMLQR
        WASPIQGQGQLDPYSTDLEQKRLMLQR
Subjt:  WASPIQGQGQLDPYSTDLEQKRLMLQR

SwissProt top hitse value%identityAlignment
O60166 Nuclear movement protein nudc1.0e-0625.71Show/hide
Query:  FEWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHVEHELTCP-------------VKMDSSFWTLAEDDIMHITLQKRDKGQTWASPIQGQGQLDPYSTDL
        +EWDQT+ +V+I I++P    +K     + +  ++ ++  P             + +D S WT+ E + + I L+K +K + W+  I+G   +D  S + 
Subjt:  FEWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHVEHELTCP-------------VKMDSSFWTLAEDDIMHITLQKRDKGQTWASPIQGQGQLDPYSTDL

Query:  EQKRL
        E  +L
Subjt:  EQKRL

Q5M823 NudC domain-containing protein 21.1e-0832.71Show/hide
Query:  EWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHV----------EHELTCPVKMDSSFWTLAEDDIMHITL--QKRDKGQTWASPIQGQGQLDPYSTDLEQ
        +W QTLEEV I + +PP   ++   C +QSRHV          + +L      D   WTL +  ++ I L   KRD    W S ++ +   DP+  D  Q
Subjt:  EWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHV----------EHELTCPVKMDSSFWTLAEDDIMHITL--QKRDKGQTWASPIQGQGQLDPYSTDLEQ

Query:  KRLMLQR
        ++L L+R
Subjt:  KRLMLQR

Q8WVJ2 NudC domain-containing protein 21.1e-0832.71Show/hide
Query:  EWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHV----------EHELTCPVKMDSSFWTLAEDDIMHITL--QKRDKGQTWASPIQGQGQLDPYSTDLEQ
        +W QTLEEV I + +PP   ++   C +QSRHV          + +L      D   WTL +  ++ I L   KRD    W S ++ +   DP+  D  Q
Subjt:  EWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHV----------EHELTCPVKMDSSFWTLAEDDIMHITL--QKRDKGQTWASPIQGQGQLDPYSTDLEQ

Query:  KRLMLQR
        ++L L+R
Subjt:  KRLMLQR

Q9CQ48 NudC domain-containing protein 21.1e-0832.71Show/hide
Query:  EWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHV----------EHELTCPVKMDSSFWTLAEDDIMHITL--QKRDKGQTWASPIQGQGQLDPYSTDLEQ
        +W QTLEEV I + +PP   ++   C +QSRHV          + +L      D   WTL +  ++ I L   KRD    W S ++ +   DP+  D  Q
Subjt:  EWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHV----------EHELTCPVKMDSSFWTLAEDDIMHITL--QKRDKGQTWASPIQGQGQLDPYSTDLEQ

Query:  KRLMLQR
        ++L L+R
Subjt:  KRLMLQR

Q9STN7 Protein BOBBER 23.9e-0625.24Show/hide
Query:  FEWDQTLEEVNIYINLPPNVHSKQFYCKIQSRH-----------VEHELTCPVKMDSSFWTLAEDDIMHITLQKRDKGQTWASPIQGQGQLDPYSTDLEQ
        + W Q L+EV I I +P    S+   C+I+              V+ E    VK D  FW + +  ++ + L K+D+ + W   ++G+ ++D    + E 
Subjt:  FEWDQTLEEVNIYINLPPNVHSKQFYCKIQSRH-----------VEHELTCPVKMDSSFWTLAEDDIMHITLQKRDKGQTWASPIQGQGQLDPYSTDLEQ

Query:  KRL
         +L
Subjt:  KRL

Arabidopsis top hitse value%identityAlignment
AT4G27890.1 HSP20-like chaperones superfamily protein2.8e-0725.24Show/hide
Query:  FEWDQTLEEVNIYINLPPNVHSKQFYCKIQSRH-----------VEHELTCPVKMDSSFWTLAEDDIMHITLQKRDKGQTWASPIQGQGQLDPYSTDLEQ
        + W Q L+EV I I +P    S+   C+I+              V+ E    VK D  FW + +  ++ + L K+D+ + W   ++G+ ++D    + E 
Subjt:  FEWDQTLEEVNIYINLPPNVHSKQFYCKIQSRH-----------VEHELTCPVKMDSSFWTLAEDDIMHITLQKRDKGQTWASPIQGQGQLDPYSTDLEQ

Query:  KRL
         +L
Subjt:  KRL

AT5G53400.1 HSP20-like chaperones superfamily protein8.0e-0724.27Show/hide
Query:  FEWDQTLEEVNIYINLPPNVHSKQFYCKIQSRH-----------VEHELTCPVKMDSSFWTLAEDDIMHITLQKRDKGQTWASPIQGQGQLDPYSTDLEQ
        + W Q L+EV + I +P    ++   C+I+              V+ EL   VK D  +W + +  ++ I L K D+ + W   ++G+ ++D    + E 
Subjt:  FEWDQTLEEVNIYINLPPNVHSKQFYCKIQSRH-----------VEHELTCPVKMDSSFWTLAEDDIMHITLQKRDKGQTWASPIQGQGQLDPYSTDLEQ

Query:  KRL
         +L
Subjt:  KRL

AT5G58740.1 HSP20-like chaperones superfamily protein1.6e-5276.38Show/hide
Query:  MAEKLAPDKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHVE-----------HELTCPVKMDSSFWTLAEDDIMHITLQKRDKGQT
        MAEKLAP+KRH F+HNGQKVFEWDQTLEEVN+YI LPPNVH K F+CKIQS+H+E           H+L+ PVK D SFWTL EDDIMHITLQKR+KGQT
Subjt:  MAEKLAPDKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHVE-----------HELTCPVKMDSSFWTLAEDDIMHITLQKRDKGQT

Query:  WASPIQGQGQLDPYSTDLEQKRLMLQR
        WASPI GQGQLDPY+TDLEQKRLMLQR
Subjt:  WASPIQGQGQLDPYSTDLEQKRLMLQR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGAGAAATTGGCTCCAGACAAGCGCCATAGCTTCCTCCACAACGGTCAGAAAGTGTTTGAATGGGATCAGACTCTGGAGGAGGTTAACATTTACATTAATTTGCC
TCCAAATGTTCATTCCAAGCAATTCTACTGCAAGATTCAGTCTAGGCATGTCGAGCACGAGCTTACTTGCCCTGTGAAGATGGATTCGTCTTTCTGGACGCTAGCAGAGG
ATGACATAATGCACATTACACTGCAGAAGAGGGACAAGGGTCAGACATGGGCTTCTCCCATACAGGGTCAGGGTCAACTTGATCCTTACTCCACTGATCTTGAGCAGAAG
CGTCTTATGCTCCAGAGAACCCTGGATTTGACTTTTCACAAGCTCAGTTTTCGGGCAACTGTCCTGATCCAAGGACCTTCATGGGTGGAATTCGCTCAGATTGACAAATA
CAAAACAAAACTAATTCCTAGAGCTCCAACTTTGATAGCAGATGCAACTTGCAAGTTCGTGGTAAAAGTATCAACTGATATCAACATTCTCTATATTCCCACCTCTCAAA
GGATGGACGACAACTCCACCAGTCCTCGCGCAGAAGGAGAATCGATGGAGGATGTGGGGCGAGCAGGAGTCTCGACGGCGCAGCGGAAGAAGGTCGCCGGCACGGCGGAT
GTGGGTCGTCGGCGCGATGCGAGAGGTAGGGATTGGTATACACTCTGTGTTGGGGGTGGAAAATGGTGGGAAATGGAGGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGAGAAATTGGCTCCAGACAAGCGCCATAGCTTCCTCCACAACGGTCAGAAAGTGTTTGAATGGGATCAGACTCTGGAGGAGGTTAACATTTACATTAATTTGCC
TCCAAATGTTCATTCCAAGCAATTCTACTGCAAGATTCAGTCTAGGCATGTCGAGCACGAGCTTACTTGCCCTGTGAAGATGGATTCGTCTTTCTGGACGCTAGCAGAGG
ATGACATAATGCACATTACACTGCAGAAGAGGGACAAGGGTCAGACATGGGCTTCTCCCATACAGGGTCAGGGTCAACTTGATCCTTACTCCACTGATCTTGAGCAGAAG
CGTCTTATGCTCCAGAGAACCCTGGATTTGACTTTTCACAAGCTCAGTTTTCGGGCAACTGTCCTGATCCAAGGACCTTCATGGGTGGAATTCGCTCAGATTGACAAATA
CAAAACAAAACTAATTCCTAGAGCTCCAACTTTGATAGCAGATGCAACTTGCAAGTTCGTGGTAAAAGTATCAACTGATATCAACATTCTCTATATTCCCACCTCTCAAA
GGATGGACGACAACTCCACCAGTCCTCGCGCAGAAGGAGAATCGATGGAGGATGTGGGGCGAGCAGGAGTCTCGACGGCGCAGCGGAAGAAGGTCGCCGGCACGGCGGAT
GTGGGTCGTCGGCGCGATGCGAGAGGTAGGGATTGGTATACACTCTGTGTTGGGGGTGGAAAATGGTGGGAAATGGAGGATTAA
Protein sequenceShow/hide protein sequence
MAEKLAPDKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHVEHELTCPVKMDSSFWTLAEDDIMHITLQKRDKGQTWASPIQGQGQLDPYSTDLEQK
RLMLQRTLDLTFHKLSFRATVLIQGPSWVEFAQIDKYKTKLIPRAPTLIADATCKFVVKVSTDINILYIPTSQRMDDNSTSPRAEGESMEDVGRAGVSTAQRKKVAGTAD
VGRRRDARGRDWYTLCVGGGKWWEMED