CuGenDBv2

Gene ID	Spg005908
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Rab5-interacting
Genome location	scaffold11:1933164..1935292
RNA-Seq Expression	Spg005908
Synteny	Spg005908
Gene Ontology terms	GO:0006996 - organelle organization (biological process) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR010742 - Rab5-interacting protein IPR029008 - Rab5-interacting protein family

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0067751.1 Rab5-interacting [Cucumis melo var. makuwa]

1.3e-65

84.21

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Query:  MKDGKSIKVNSQFQHQNGHLPPFKLAKLFDPEASWDKDQLGDVLHWMRQSVAFVCGLLWGSIPLVGGVWFILFLVISTTMVYGYYAMILKVDEEEFGGHG
        MKDGK++KVNSQ QHQNGHLPPFKLA+LFDPE SWDKDQLGDVLHWMRQSVA VCGLLWGSIPLVGG+WFILFLVISTTM+YGYYAMILKVDEEEFGGHG
Subjt:  MKDGKSIKVNSQFQHQNGHLPPFKLAKLFDPEASWDKDQLGDVLHWMRQSVAFVCGLLWGSIPLVGGVWFILFLVISTTMVYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASITLFLLGTFLMMVLSSFSIPGEAMKGTLAAIVACFLISDCAV
        VLLQEGLFAS+TLFLLGT L MVLS+FS   +A    L AIVAC  IS+CAV
Subjt:  VLLQEGLFASITLFLLGTFLMMVLSSFSIPGEAMKGTLAAIVACFLISDCAV

XP_008457469.1 PREDICTED: uncharacterized protein C20orf24 homolog [Cucumis melo]

3.2e-56

86.61

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Query:  MKDGKSIKVNSQFQHQNGHLPPFKLAKLFDPEASWDKDQLGDVLHWMRQSVAFVCGLLWGSIPLVGGVWFILFLVISTTMVYGYYAMILKVDEEEFGGHG
        MKDGK++KVNSQ QHQNGHLPPFKLA+LFDPE SWDKDQLGDVLHWMRQSVA VCGLLWGSIPLVGG+WFILFLVISTTM+YGYYAMILKVDEEEFGGHG
Subjt:  MKDGKSIKVNSQFQHQNGHLPPFKLAKLFDPEASWDKDQLGDVLHWMRQSVAFVCGLLWGSIPLVGGVWFILFLVISTTMVYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASITLFLLGTFLMMVLSSF
        VLLQEGLFAS+TLFLL   L+  L  F
Subjt:  VLLQEGLFASITLFLLGTFLMMVLSSF

XP_022948613.1 uncharacterized protein C20orf24 homolog [Cucurbita moschata]

2.9e-57

89.76

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Query:  MKDGKSIKVNSQFQHQNGHLPPFKLAKLFDPEASWDKDQLGDVLHWMRQSVAFVCGLLWGSIPLVGGVWFILFLVISTTMVYGYYAMILKVDEEEFGGHG
        MKDGKSIKVNSQ QHQNGHLPPFKLA LFDPEASWDKDQLGDVLHWMRQSVA VCGLLWGS+PLVGG+WFILFLVISTTMVYGYYAMILKVDEEEFGGHG
Subjt:  MKDGKSIKVNSQFQHQNGHLPPFKLAKLFDPEASWDKDQLGDVLHWMRQSVAFVCGLLWGSIPLVGGVWFILFLVISTTMVYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASITLFLLGTFLMMVLSSF
        VLLQEGLFASITLFLL   L+  L  F
Subjt:  VLLQEGLFASITLFLLGTFLMMVLSSF

XP_022998338.1 uncharacterized protein C20orf24 homolog [Cucurbita maxima]

6.5e-57

88.98

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Query:  MKDGKSIKVNSQFQHQNGHLPPFKLAKLFDPEASWDKDQLGDVLHWMRQSVAFVCGLLWGSIPLVGGVWFILFLVISTTMVYGYYAMILKVDEEEFGGHG
        MKDGKSIKVNSQ QHQNGHLPPFKLA LFDPEASWDKDQLGDVLHWMRQSVA VCGLLWGS+PLVGG+WFI+FLVISTTMVYGYYAMILKVDEEEFGGHG
Subjt:  MKDGKSIKVNSQFQHQNGHLPPFKLAKLFDPEASWDKDQLGDVLHWMRQSVAFVCGLLWGSIPLVGGVWFILFLVISTTMVYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASITLFLLGTFLMMVLSSF
        VLLQEGLFASITLFLL   L+  L  F
Subjt:  VLLQEGLFASITLFLLGTFLMMVLSSF

XP_038895585.1 respirasome Complex Assembly Factor 1-like isoform X2 [Benincasa hispida]

6.5e-57

89.76

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Query:  MKDGKSIKVNSQFQHQNGHLPPFKLAKLFDPEASWDKDQLGDVLHWMRQSVAFVCGLLWGSIPLVGGVWFILFLVISTTMVYGYYAMILKVDEEEFGGHG
        MKDGKS KVNSQ QHQNGHLPPFKLAKLFDPE SWDKDQLGDVLHWMRQSVA VCGLLWGSIPLVGG+WFILFLVISTTMVYGYYAMILKVDEEEFGGHG
Subjt:  MKDGKSIKVNSQFQHQNGHLPPFKLAKLFDPEASWDKDQLGDVLHWMRQSVAFVCGLLWGSIPLVGGVWFILFLVISTTMVYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASITLFLLGTFLMMVLSSF
        VLLQEGLFASITLFLL   L+  L  F
Subjt:  VLLQEGLFASITLFLLGTFLMMVLSSF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LY22 Uncharacterized protein

2.9e-55

88.98

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Query:  MKDGKSIKVNSQFQHQNGHLPPFKLAKLFDPEASWDKDQLGDVLHWMRQSVAFVCGLLWGSIPLVGGVWFILFLVISTTMVYGYYAMILKVDEEEFGGHG
        MKDGKS+KVNSQ Q QNGHLPPFKLAKLFDPE SWDKDQLGDVLHWMRQSVA VCGLLWGSIPLVGGVWFILFLVISTTM+YGYYAMILKVDEEEFGGHG
Subjt:  MKDGKSIKVNSQFQHQNGHLPPFKLAKLFDPEASWDKDQLGDVLHWMRQSVAFVCGLLWGSIPLVGGVWFILFLVISTTMVYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASITLFLLGTFLMMVLSSF
        VLLQEGLFASITLFLL   L+  L  F
Subjt:  VLLQEGLFASITLFLLGTFLMMVLSSF

A0A1S3C692 uncharacterized protein C20orf24 homolog

1.6e-56

86.61

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Query:  MKDGKSIKVNSQFQHQNGHLPPFKLAKLFDPEASWDKDQLGDVLHWMRQSVAFVCGLLWGSIPLVGGVWFILFLVISTTMVYGYYAMILKVDEEEFGGHG
        MKDGK++KVNSQ QHQNGHLPPFKLA+LFDPE SWDKDQLGDVLHWMRQSVA VCGLLWGSIPLVGG+WFILFLVISTTM+YGYYAMILKVDEEEFGGHG
Subjt:  MKDGKSIKVNSQFQHQNGHLPPFKLAKLFDPEASWDKDQLGDVLHWMRQSVAFVCGLLWGSIPLVGGVWFILFLVISTTMVYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASITLFLLGTFLMMVLSSF
        VLLQEGLFAS+TLFLL   L+  L  F
Subjt:  VLLQEGLFASITLFLLGTFLMMVLSSF

A0A5A7VQ84 Rab5-interacting

6.3e-66

84.21

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Query:  MKDGKSIKVNSQFQHQNGHLPPFKLAKLFDPEASWDKDQLGDVLHWMRQSVAFVCGLLWGSIPLVGGVWFILFLVISTTMVYGYYAMILKVDEEEFGGHG
        MKDGK++KVNSQ QHQNGHLPPFKLA+LFDPE SWDKDQLGDVLHWMRQSVA VCGLLWGSIPLVGG+WFILFLVISTTM+YGYYAMILKVDEEEFGGHG
Subjt:  MKDGKSIKVNSQFQHQNGHLPPFKLAKLFDPEASWDKDQLGDVLHWMRQSVAFVCGLLWGSIPLVGGVWFILFLVISTTMVYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASITLFLLGTFLMMVLSSFSIPGEAMKGTLAAIVACFLISDCAV
        VLLQEGLFAS+TLFLLGT L MVLS+FS   +A    L AIVAC  IS+CAV
Subjt:  VLLQEGLFASITLFLLGTFLMMVLSSFSIPGEAMKGTLAAIVACFLISDCAV

A0A6J1G9S8 uncharacterized protein C20orf24 homolog

1.4e-57

89.76

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Query:  MKDGKSIKVNSQFQHQNGHLPPFKLAKLFDPEASWDKDQLGDVLHWMRQSVAFVCGLLWGSIPLVGGVWFILFLVISTTMVYGYYAMILKVDEEEFGGHG
        MKDGKSIKVNSQ QHQNGHLPPFKLA LFDPEASWDKDQLGDVLHWMRQSVA VCGLLWGS+PLVGG+WFILFLVISTTMVYGYYAMILKVDEEEFGGHG
Subjt:  MKDGKSIKVNSQFQHQNGHLPPFKLAKLFDPEASWDKDQLGDVLHWMRQSVAFVCGLLWGSIPLVGGVWFILFLVISTTMVYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASITLFLLGTFLMMVLSSF
        VLLQEGLFASITLFLL   L+  L  F
Subjt:  VLLQEGLFASITLFLLGTFLMMVLSSF

A0A6J1KGG2 uncharacterized protein C20orf24 homolog

3.1e-57

88.98

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Query:  MKDGKSIKVNSQFQHQNGHLPPFKLAKLFDPEASWDKDQLGDVLHWMRQSVAFVCGLLWGSIPLVGGVWFILFLVISTTMVYGYYAMILKVDEEEFGGHG
        MKDGKSIKVNSQ QHQNGHLPPFKLA LFDPEASWDKDQLGDVLHWMRQSVA VCGLLWGS+PLVGG+WFI+FLVISTTMVYGYYAMILKVDEEEFGGHG
Subjt:  MKDGKSIKVNSQFQHQNGHLPPFKLAKLFDPEASWDKDQLGDVLHWMRQSVAFVCGLLWGSIPLVGGVWFILFLVISTTMVYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASITLFLLGTFLMMVLSSF
        VLLQEGLFASITLFLL   L+  L  F
Subjt:  VLLQEGLFASITLFLLGTFLMMVLSSF

SwissProt top hits

e value

%identity

Alignment

Q9BUV8 Respirasome Complex Assembly Factor 1

3.2e-14

36.75

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Query:  MKDGKSIKVNSQFQHQNGHLPPFKLAKLFDPEASW-DKDQLGDVLHWMRQSVAFVCGLLWGSIPLVGGVWFILFLVISTTMVYGYYAMILKVDEEEFGGH
        M  G+  +   Q Q  NG L     +K+   +A+W DKD+  DV++W RQ +A V G++WG +PL G +    F +I+  ++Y Y++  L++DEEE+GG 
Subjt:  MKDGKSIKVNSQFQHQNGHLPPFKLAKLFDPEASW-DKDQLGDVLHWMRQSVAFVCGLLWGSIPLVGGVWFILFLVISTTMVYGYYAMILKVDEEEFGGH

Query:  GVLLQEGLFASITLFLL
          L +EG   S  LF++
Subjt:  GVLLQEGLFASITLFLL

Q9CQT9 Respirasome Complex Assembly Factor 1

2.4e-14

36.75

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Query:  MKDGKSIKVNSQFQHQNGHLPPFKLAKLFDPEASW-DKDQLGDVLHWMRQSVAFVCGLLWGSIPLVGGVWFILFLVISTTMVYGYYAMILKVDEEEFGGH
        M  G+  +   Q Q  NG L     +K+   +A+W DKD+  DV++W RQ +A V G++WG +PL G +    F +I+  ++Y Y++  L++DEEE+GG 
Subjt:  MKDGKSIKVNSQFQHQNGHLPPFKLAKLFDPEASW-DKDQLGDVLHWMRQSVAFVCGLLWGSIPLVGGVWFILFLVISTTMVYGYYAMILKVDEEEFGGH

Query:  GVLLQEGLFASITLFLL
          L +EG   S  LF++
Subjt:  GVLLQEGLFASITLFLL

Arabidopsis top hits

e value

%identity

Alignment

AT2G29020.1 Rab5-interacting family protein

2.7e-45

65.41

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Query:  MKDGKSIKVNS------QFQHQNGHLPPFKLAKLFDPEASWDKDQLGDVLHWMRQSVAFVCGLLWGSIPLVGGVWFILFLVISTTMVYGYYAMILKVDEE
        MK+GKS K +S      Q  HQN HL  F  AKLFD EASWDKDQLGDVLHW+RQ V  +CGLLWG+IPLVGG+W +LFL IS+ +VYGYYA++LK+DEE
Subjt:  MKDGKSIKVNS------QFQHQNGHLPPFKLAKLFDPEASWDKDQLGDVLHWMRQSVAFVCGLLWGSIPLVGGVWFILFLVISTTMVYGYYAMILKVDEE

Query:  EFGGHGVLLQEGLFASITLFLLGTFLMMVLSSF
        +FGGH  LLQ+GLFAS++LFLL   L+  LSSF
Subjt:  EFGGHGVLLQEGLFASITLFLLGTFLMMVLSSF

AT5G59410.1 Rab5-interacting family protein

3.8e-47

70.77

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Query:  MKDGKSIKVN---SQFQHQNGHLPPFKLAKLFDPEASWDKDQLGDVLHWMRQSVAFVCGLLWGSIPLVGGVWFILFLVISTTMVYGYYAMILKVDEEEFG
        MK+ KS K+N    Q  HQN HL P KLAKLFDP+ASWDKDQLGDVLHW+RQ V  + GLLWGSIPLVGG+W ILFL IS+ +VYGYYAMILKVDEE+FG
Subjt:  MKDGKSIKVN---SQFQHQNGHLPPFKLAKLFDPEASWDKDQLGDVLHWMRQSVAFVCGLLWGSIPLVGGVWFILFLVISTTMVYGYYAMILKVDEEEFG

Query:  GHGVLLQEGLFASITLFLLGTFLMMVLSSF
        GH  LLQEGLFAS+TLFLL   L+  L+ F
Subjt:  GHGVLLQEGLFASITLFLLGTFLMMVLSSF

Sequences

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CDS sequence

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ATGAAGGACGGGAAGTCGATTAAGGTCAATTCTCAGTTCCAGCACCAGAACGGTCACTTGCCGCCCTTCAAGTTGGCCAAATTGTTCGATCCAGAGGCTTCGTGGGATAA
GGATCAACTAGGAGATGTCTTGCATTGGATGCGACAGTCGGTTGCGTTTGTATGTGGACTGCTTTGGGGTTCGATACCTCTGGTTGGAGGCGTTTGGTTCATCTTATTCT
TGGTGATATCAACTACGATGGTATATGGATACTATGCAATGATTTTGAAAGTAGACGAAGAAGAATTCGGGGGTCATGGAGTTCTCCTCCAGGAAGGGCTTTTTGCTTCC
ATAACTCTGTTTCTGCTTGGGACATTTCTGATGATGGTTTTGTCATCGTTCTCGATACCGGGCGAAGCTATGAAGGGGACGTTGGCTGCCATTGTTGCTTGCTTTTTGAT
TAGTGATTGTGCAGTAGCTTGCAGTTAA

mRNA sequence

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Protein sequence

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MKDGKSIKVNSQFQHQNGHLPPFKLAKLFDPEASWDKDQLGDVLHWMRQSVAFVCGLLWGSIPLVGGVWFILFLVISTTMVYGYYAMILKVDEEEFGGHGVLLQEGLFAS
ITLFLLGTFLMMVLSSFSIPGEAMKGTLAAIVACFLISDCAVACS

Spg005908 (gene) of Sponge gourd (cylindrica) v1 genome