CuGenDBv2

Gene ID	Spg005914
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	SAGA-associated factor 11
Genome location	scaffold11:723415..725951
RNA-Seq Expression	Spg005914
Synteny	Spg005914
Gene Ontology terms	GO:0006325 - chromatin organization (biological process) GO:0016310 - phosphorylation (biological process) GO:0035616 - histone H2B conserved C-terminal lysine deubiquitination (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0031969 - chloroplast membrane (cellular component) GO:0070461 - SAGA-type complex (cellular component) GO:0071819 - DUBm complex (cellular component) GO:0016301 - kinase activity (molecular function) GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR013246 - SAGA complex, Sgf11 subunit

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7019118.1 Farnesol kinase, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]

2.6e-33

96.34

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Query:  MNCGRSIMAGRFAPHLEKCMGRGRKARLKVTRSSTAAQSRYSRGSPVSAYSPYPNSTSTNRLPNGTSSLAGEEYSNGTSEDP
        MNCGRSIMAGRFAPHLEKCMGRGRKAR KVTRSSTAAQSRYSRG+PVS YSPYPNSTSTNRLPNGTSSLAGEEYSNGTSEDP
Subjt:  MNCGRSIMAGRFAPHLEKCMGRGRKARLKVTRSSTAAQSRYSRGSPVSAYSPYPNSTSTNRLPNGTSSLAGEEYSNGTSEDP

XP_004153719.1 SAGA-associated factor 11 [Cucumis sativus]

4.8e-35

97.56

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Query:  MNCGRSIMAGRFAPHLEKCMGRGRKARLKVTRSSTAAQSRYSRGSPVSAYSPYPNSTSTNRLPNGTSSLAGEEYSNGTSEDP
        MNCGRSIMAGRFAPHLEKCMGRGRKAR KVTRSSTAAQSRYSRG+PVSAYSPYPNSTSTNRLPNGTSSLAGEEYSNGTSEDP
Subjt:  MNCGRSIMAGRFAPHLEKCMGRGRKARLKVTRSSTAAQSRYSRGSPVSAYSPYPNSTSTNRLPNGTSSLAGEEYSNGTSEDP

XP_008457340.1 PREDICTED: ataxin-7-like protein 3 [Cucumis melo]

4.8e-35

97.56

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Query:  MNCGRSIMAGRFAPHLEKCMGRGRKARLKVTRSSTAAQSRYSRGSPVSAYSPYPNSTSTNRLPNGTSSLAGEEYSNGTSEDP
        MNCGRSIMAGRFAPHLEKCMGRGRKAR KVTRSSTAAQSRYSRG+PVSAYSPYPNSTSTNRLPNGTSSLAGEEYSNGTSEDP
Subjt:  MNCGRSIMAGRFAPHLEKCMGRGRKARLKVTRSSTAAQSRYSRGSPVSAYSPYPNSTSTNRLPNGTSSLAGEEYSNGTSEDP

XP_022970596.1 ataxin-7-like protein 3 isoform X2 [Cucurbita maxima]

2.6e-33

96.34

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Query:  MNCGRSIMAGRFAPHLEKCMGRGRKARLKVTRSSTAAQSRYSRGSPVSAYSPYPNSTSTNRLPNGTSSLAGEEYSNGTSEDP
        MNCGRSIMAGRFAPHLEKCMGRGRKAR KVTRSSTAAQSRYSRG+PVS YSPYPNSTSTNRLPNGTSSLAGEEYSNGTSEDP
Subjt:  MNCGRSIMAGRFAPHLEKCMGRGRKARLKVTRSSTAAQSRYSRGSPVSAYSPYPNSTSTNRLPNGTSSLAGEEYSNGTSEDP

XP_038893583.1 SAGA-associated factor 11 [Benincasa hispida]

2.9e-32

93.9

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Query:  MNCGRSIMAGRFAPHLEKCMGRGRKARLKVTRSSTAAQSRYSRGSPVSAYSPYPNSTSTNRLPNGTSSLAGEEYSNGTSEDP
        MNCGRSIMAGRFAPHLEKCMGRGRKAR KVTRSSTAAQSRYSRG+PVSAYSPY NSTSTNRL NGTSSLAGEEYSNG SEDP
Subjt:  MNCGRSIMAGRFAPHLEKCMGRGRKARLKVTRSSTAAQSRYSRGSPVSAYSPYPNSTSTNRLPNGTSSLAGEEYSNGTSEDP

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LYA8 SAGA-associated factor 11

2.3e-35

97.56

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Query:  MNCGRSIMAGRFAPHLEKCMGRGRKARLKVTRSSTAAQSRYSRGSPVSAYSPYPNSTSTNRLPNGTSSLAGEEYSNGTSEDP
        MNCGRSIMAGRFAPHLEKCMGRGRKAR KVTRSSTAAQSRYSRG+PVSAYSPYPNSTSTNRLPNGTSSLAGEEYSNGTSEDP
Subjt:  MNCGRSIMAGRFAPHLEKCMGRGRKARLKVTRSSTAAQSRYSRGSPVSAYSPYPNSTSTNRLPNGTSSLAGEEYSNGTSEDP

A0A1S3C599 SAGA-associated factor 11

2.3e-35

97.56

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Query:  MNCGRSIMAGRFAPHLEKCMGRGRKARLKVTRSSTAAQSRYSRGSPVSAYSPYPNSTSTNRLPNGTSSLAGEEYSNGTSEDP
        MNCGRSIMAGRFAPHLEKCMGRGRKAR KVTRSSTAAQSRYSRG+PVSAYSPYPNSTSTNRLPNGTSSLAGEEYSNGTSEDP
Subjt:  MNCGRSIMAGRFAPHLEKCMGRGRKARLKVTRSSTAAQSRYSRGSPVSAYSPYPNSTSTNRLPNGTSSLAGEEYSNGTSEDP

A0A5D3BBT0 SAGA-associated factor 11

7.0e-32

97.37

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Query:  MNCGRSIMAGRFAPHLEKCMGRGRKARLKVTRSSTAAQSRYSRGSPVSAYSPYPNSTSTNRLPNGTSSLAGEEYSN
        MNCGRSIMAGRFAPHLEKCMGRGRKAR KVTRSSTAAQSRYSRG+PVSAYSPYPNSTSTNRLPNGTSSLAGEEYSN
Subjt:  MNCGRSIMAGRFAPHLEKCMGRGRKARLKVTRSSTAAQSRYSRGSPVSAYSPYPNSTSTNRLPNGTSSLAGEEYSN

A0A6J1GAV8 SAGA-associated factor 11

7.0e-32

91.46

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Query:  MNCGRSIMAGRFAPHLEKCMGRGRKARLKVTRSSTAAQSRYSRGSPVSAYSPYPNSTSTNRLPNGTSSLAGEEYSNGTSEDP
        MNCGRSI+AGRFAPHLEKCMGRGRKARLKVTRSSTA QSRYSRGS VSAYSPYPNSTSTNRLPNGTSSLAG EYSNG S +P
Subjt:  MNCGRSIMAGRFAPHLEKCMGRGRKARLKVTRSSTAAQSRYSRGSPVSAYSPYPNSTSTNRLPNGTSSLAGEEYSNGTSEDP

A0A6J1I624 SAGA-associated factor 11

1.3e-33

96.34

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Query:  MNCGRSIMAGRFAPHLEKCMGRGRKARLKVTRSSTAAQSRYSRGSPVSAYSPYPNSTSTNRLPNGTSSLAGEEYSNGTSEDP
        MNCGRSIMAGRFAPHLEKCMGRGRKAR KVTRSSTAAQSRYSRG+PVS YSPYPNSTSTNRLPNGTSSLAGEEYSNGTSEDP
Subjt:  MNCGRSIMAGRFAPHLEKCMGRGRKARLKVTRSSTAAQSRYSRGSPVSAYSPYPNSTSTNRLPNGTSSLAGEEYSNGTSEDP

SwissProt top hits

e value

%identity

Alignment

Q94BV2 SAGA-associated factor 11

6.4e-22

67.95

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Query:  MNCGRSIMAGRFAPHLEKCMGRGRKARLKVTRSSTAAQSRYSRGSPVSAYSPYPNSTSTNRLPNGTSSLAGEEYSNGT
        MNCGR I+AGRFAPHLEKCMG+GRKAR K TRS+TAAQ+R +R SP   YSPYPNS S N+L +G+  +AGE+ SN T
Subjt:  MNCGRSIMAGRFAPHLEKCMGRGRKARLKVTRSSTAAQSRYSRGSPVSAYSPYPNSTSTNRLPNGTSSLAGEEYSNGT

Arabidopsis top hits

e value

%identity

Alignment

AT5G58575.1 CONTAINS InterPro DOMAIN/s: Sgf11, transcriptional regulation (InterPro:IPR013246); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

4.5e-23

67.95

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Query:  MNCGRSIMAGRFAPHLEKCMGRGRKARLKVTRSSTAAQSRYSRGSPVSAYSPYPNSTSTNRLPNGTSSLAGEEYSNGT
        MNCGR I+AGRFAPHLEKCMG+GRKAR K TRS+TAAQ+R +R SP   YSPYPNS S N+L +G+  +AGE+ SN T
Subjt:  MNCGRSIMAGRFAPHLEKCMGRGRKARLKVTRSSTAAQSRYSRGSPVSAYSPYPNSTSTNRLPNGTSSLAGEEYSNGT

Sequences

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CDS sequence

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ATGAATTGTGGTCGATCAATCATGGCTGGAAGATTTGCTCCTCATTTAGAGAAATGCATGGGAAGGGGTAGAAAGGCTCGCCTCAAAGTAACAAGAAGCAGTACAGCCGC
ACAGAGCCGGTATTCACGAGGCAGTCCTGTTTCTGCATATTCCCCTTATCCTAATTCCACCAGCACAAATCGCTTGCCTAATGGAACGTCTAGCCTTGCAGGGGAGGAGT
ACTCAAACGGTACATCCGAAGACCCATGA

mRNA sequence

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Protein sequence

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MNCGRSIMAGRFAPHLEKCMGRGRKARLKVTRSSTAAQSRYSRGSPVSAYSPYPNSTSTNRLPNGTSSLAGEEYSNGTSEDP

Spg005914 (gene) of Sponge gourd (cylindrica) v1 genome