; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg005915 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg005915
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionsister chromatid cohesion protein SCC4
Genome locationscaffold11:7253..9050
RNA-Seq ExpressionSpg005915
SyntenySpg005915
Gene Ontology termsGO:0007064 - mitotic sister chromatid cohesion (biological process)
InterPro domainsIPR019440 - Chromatid cohesion factor MAU2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607383.1 Sister chromatid cohesion protein SCC4, partial [Cucurbita argyrosperma subsp. sororia]2.4e-8997.65Show/hide
Query:  MEAVAEGLWRLADYHEKKGEVGKAIKCLEAICQSNVSFFPVVEVKTRLRIATLLLTHSHNVNHAKSHLERSQLLLKSIPSCFELKCRAYSLLSQCYHLVG
        MEAVAEGLWRLADYHEKKGE+GKAIKCLEAICQS+VSFFPVVEVKTRLRIATLLLTHSHNVNHAKSHLERSQLLLKSIPSCFELKCRAYSLLSQCYHLVG
Subjt:  MEAVAEGLWRLADYHEKKGEVGKAIKCLEAICQSNVSFFPVVEVKTRLRIATLLLTHSHNVNHAKSHLERSQLLLKSIPSCFELKCRAYSLLSQCYHLVG

Query:  AIPPQKQILYKGLDLTNSAGHELSVKLWSCNFNSQLANALIIEGDYQNSISALESGYIFSVEICYPELQV
        AIPPQKQILYKGLDLTNSAGHELSVKLWSCNFNSQLANALIIEGDYQNSI+ALESGYIFSVEICYPELQ+
Subjt:  AIPPQKQILYKGLDLTNSAGHELSVKLWSCNFNSQLANALIIEGDYQNSISALESGYIFSVEICYPELQV

XP_022949168.1 sister chromatid cohesion protein SCC4 [Cucurbita moschata]2.4e-8997.65Show/hide
Query:  MEAVAEGLWRLADYHEKKGEVGKAIKCLEAICQSNVSFFPVVEVKTRLRIATLLLTHSHNVNHAKSHLERSQLLLKSIPSCFELKCRAYSLLSQCYHLVG
        MEAVAEGLWRLADYHEKKGE+GKAIKCLEAICQS+VSFFPVVEVKTRLRIATLLLTHSHNVNHAKSHLERSQLLLKSIPSCFELKCRAYSLLSQCYHLVG
Subjt:  MEAVAEGLWRLADYHEKKGEVGKAIKCLEAICQSNVSFFPVVEVKTRLRIATLLLTHSHNVNHAKSHLERSQLLLKSIPSCFELKCRAYSLLSQCYHLVG

Query:  AIPPQKQILYKGLDLTNSAGHELSVKLWSCNFNSQLANALIIEGDYQNSISALESGYIFSVEICYPELQV
        AIPPQKQILYKGLDLTNSAGHELSVKLWSCNFNSQLANALIIEGDYQNSI+ALESGYIFSVEICYPELQ+
Subjt:  AIPPQKQILYKGLDLTNSAGHELSVKLWSCNFNSQLANALIIEGDYQNSISALESGYIFSVEICYPELQV

XP_022998788.1 sister chromatid cohesion protein SCC4 [Cucurbita maxima]1.1e-8998.24Show/hide
Query:  MEAVAEGLWRLADYHEKKGEVGKAIKCLEAICQSNVSFFPVVEVKTRLRIATLLLTHSHNVNHAKSHLERSQLLLKSIPSCFELKCRAYSLLSQCYHLVG
        MEAVAEGLWRLADYHEKKGE+GKAIKCLEAICQS+VSFFPVVEVKTRLRIATLLLTHSHNVNHAKSHLERSQLLLKSIPSCFELKCRAYSLLSQCYHLVG
Subjt:  MEAVAEGLWRLADYHEKKGEVGKAIKCLEAICQSNVSFFPVVEVKTRLRIATLLLTHSHNVNHAKSHLERSQLLLKSIPSCFELKCRAYSLLSQCYHLVG

Query:  AIPPQKQILYKGLDLTNSAGHELSVKLWSCNFNSQLANALIIEGDYQNSISALESGYIFSVEICYPELQV
        AIPPQKQILYKGLDLTNSAGHELSVKLWSCNFNSQLANALIIEGDYQNSISALESGYIFSVEICYPELQ+
Subjt:  AIPPQKQILYKGLDLTNSAGHELSVKLWSCNFNSQLANALIIEGDYQNSISALESGYIFSVEICYPELQV

XP_023521217.1 sister chromatid cohesion protein SCC4 isoform X1 [Cucurbita pepo subsp. pepo]2.4e-8997.65Show/hide
Query:  MEAVAEGLWRLADYHEKKGEVGKAIKCLEAICQSNVSFFPVVEVKTRLRIATLLLTHSHNVNHAKSHLERSQLLLKSIPSCFELKCRAYSLLSQCYHLVG
        MEAVAEGLWRLADYHEKKGE+GKAIKCLEAICQS+VSFFPVVEVKTRLRIATLLLTHSHNVNHAKSHLERSQLLLKSIPSCFELKCRAYSLLSQCYHLVG
Subjt:  MEAVAEGLWRLADYHEKKGEVGKAIKCLEAICQSNVSFFPVVEVKTRLRIATLLLTHSHNVNHAKSHLERSQLLLKSIPSCFELKCRAYSLLSQCYHLVG

Query:  AIPPQKQILYKGLDLTNSAGHELSVKLWSCNFNSQLANALIIEGDYQNSISALESGYIFSVEICYPELQV
        AIPPQKQILYKGLDLTNSAGHELSVKLWSCNFNSQLANALIIEGDYQNSI+ALESGYIFSVEICYPELQ+
Subjt:  AIPPQKQILYKGLDLTNSAGHELSVKLWSCNFNSQLANALIIEGDYQNSISALESGYIFSVEICYPELQV

XP_023521879.1 sister chromatid cohesion protein SCC4-like [Cucurbita pepo subsp. pepo]1.1e-8998.24Show/hide
Query:  MEAVAEGLWRLADYHEKKGEVGKAIKCLEAICQSNVSFFPVVEVKTRLRIATLLLTHSHNVNHAKSHLERSQLLLKSIPSCFELKCRAYSLLSQCYHLVG
        MEAVAEGLWRLADYHEKKGE+GKAIKCLEAICQS+VSFFPVVEVKTRLRIATLLLTHSHNVNHAKSHLERSQLLLKSIPSCFELKCRAYSLLSQCYHLVG
Subjt:  MEAVAEGLWRLADYHEKKGEVGKAIKCLEAICQSNVSFFPVVEVKTRLRIATLLLTHSHNVNHAKSHLERSQLLLKSIPSCFELKCRAYSLLSQCYHLVG

Query:  AIPPQKQILYKGLDLTNSAGHELSVKLWSCNFNSQLANALIIEGDYQNSISALESGYIFSVEICYPELQV
        AIPPQKQILYKGLDLTNSAGHELSVKLWSCNFNSQLANALIIEGDYQNSI+ALESGYIFSVEICYPELQV
Subjt:  AIPPQKQILYKGLDLTNSAGHELSVKLWSCNFNSQLANALIIEGDYQNSISALESGYIFSVEICYPELQV

TrEMBL top hitse value%identityAlignment
A0A0A0L4R7 Uncharacterized protein2.4e-8794.71Show/hide
Query:  MEAVAEGLWRLADYHEKKGEVGKAIKCLEAICQSNVSFFPVVEVKTRLRIATLLLTHSHNVNHAKSHLERSQLLLKSIPSCFELKCRAYSLLSQCYHLVG
        MEAVAEGLWRLADYHEK+GE+GKAIKCLEAICQS VSFFPV+EVKTRLRIATLLLT+SHNVNHAKSHLERSQLLLKSIPSCFELKCRAYSLLSQCYHLVG
Subjt:  MEAVAEGLWRLADYHEKKGEVGKAIKCLEAICQSNVSFFPVVEVKTRLRIATLLLTHSHNVNHAKSHLERSQLLLKSIPSCFELKCRAYSLLSQCYHLVG

Query:  AIPPQKQILYKGLDLTNSAGHELSVKLWSCNFNSQLANALIIEGDYQNSISALESGYIFSVEICYPELQV
        AIPPQKQ+LYKGLDLTNSAGHELSVKLWSCNFNSQLANALIIEGDYQNSISALESGY+FS EICYPELQ+
Subjt:  AIPPQKQILYKGLDLTNSAGHELSVKLWSCNFNSQLANALIIEGDYQNSISALESGYIFSVEICYPELQV

A0A1S3BJ17 LOW QUALITY PROTEIN: MAU2 chromatid cohesion factor homolog2.4e-8794.71Show/hide
Query:  MEAVAEGLWRLADYHEKKGEVGKAIKCLEAICQSNVSFFPVVEVKTRLRIATLLLTHSHNVNHAKSHLERSQLLLKSIPSCFELKCRAYSLLSQCYHLVG
        MEAVAEGLWRLADYHEK+GE+GKAIKCLEAICQS VSFFPV+EVKTRLRIATLLLT+SHNVNHAKSHLERSQLLLKSIPSCFELKCRAYSLLSQCYHLVG
Subjt:  MEAVAEGLWRLADYHEKKGEVGKAIKCLEAICQSNVSFFPVVEVKTRLRIATLLLTHSHNVNHAKSHLERSQLLLKSIPSCFELKCRAYSLLSQCYHLVG

Query:  AIPPQKQILYKGLDLTNSAGHELSVKLWSCNFNSQLANALIIEGDYQNSISALESGYIFSVEICYPELQV
        AIPPQKQ+LYKGLDLTNSAGHELSVKLWSCNFNSQLANALIIEGDYQNSISALESGY+FS EICYPELQ+
Subjt:  AIPPQKQILYKGLDLTNSAGHELSVKLWSCNFNSQLANALIIEGDYQNSISALESGYIFSVEICYPELQV

A0A6J1DVU1 sister chromatid cohesion protein SCC45.7e-8996.47Show/hide
Query:  MEAVAEGLWRLADYHEKKGEVGKAIKCLEAICQSNVSFFPVVEVKTRLRIATLLLTHSHNVNHAKSHLERSQLLLKSIPSCFELKCRAYSLLSQCYHLVG
        MEAVAEGLWRLADYHEKKGE+GKAIKCLEAICQS VSFFPVVEVKTRLRIATLLLTHSHNVNHAKSHLERSQLLLKSIPSC ELKCRAYSLLSQCYHLVG
Subjt:  MEAVAEGLWRLADYHEKKGEVGKAIKCLEAICQSNVSFFPVVEVKTRLRIATLLLTHSHNVNHAKSHLERSQLLLKSIPSCFELKCRAYSLLSQCYHLVG

Query:  AIPPQKQILYKGLDLTNSAGHELSVKLWSCNFNSQLANALIIEGDYQNSISALESGYIFSVEICYPELQV
        AIPPQKQILYKGLDLTNS+GHELSVKLWSCNFNSQLANALIIEGDYQNSISALESGY+FSVEICYPELQ+
Subjt:  AIPPQKQILYKGLDLTNSAGHELSVKLWSCNFNSQLANALIIEGDYQNSISALESGYIFSVEICYPELQV

A0A6J1GBA4 sister chromatid cohesion protein SCC41.1e-8997.65Show/hide
Query:  MEAVAEGLWRLADYHEKKGEVGKAIKCLEAICQSNVSFFPVVEVKTRLRIATLLLTHSHNVNHAKSHLERSQLLLKSIPSCFELKCRAYSLLSQCYHLVG
        MEAVAEGLWRLADYHEKKGE+GKAIKCLEAICQS+VSFFPVVEVKTRLRIATLLLTHSHNVNHAKSHLERSQLLLKSIPSCFELKCRAYSLLSQCYHLVG
Subjt:  MEAVAEGLWRLADYHEKKGEVGKAIKCLEAICQSNVSFFPVVEVKTRLRIATLLLTHSHNVNHAKSHLERSQLLLKSIPSCFELKCRAYSLLSQCYHLVG

Query:  AIPPQKQILYKGLDLTNSAGHELSVKLWSCNFNSQLANALIIEGDYQNSISALESGYIFSVEICYPELQV
        AIPPQKQILYKGLDLTNSAGHELSVKLWSCNFNSQLANALIIEGDYQNSI+ALESGYIFSVEICYPELQ+
Subjt:  AIPPQKQILYKGLDLTNSAGHELSVKLWSCNFNSQLANALIIEGDYQNSISALESGYIFSVEICYPELQV

A0A6J1KHQ8 sister chromatid cohesion protein SCC45.1e-9098.24Show/hide
Query:  MEAVAEGLWRLADYHEKKGEVGKAIKCLEAICQSNVSFFPVVEVKTRLRIATLLLTHSHNVNHAKSHLERSQLLLKSIPSCFELKCRAYSLLSQCYHLVG
        MEAVAEGLWRLADYHEKKGE+GKAIKCLEAICQS+VSFFPVVEVKTRLRIATLLLTHSHNVNHAKSHLERSQLLLKSIPSCFELKCRAYSLLSQCYHLVG
Subjt:  MEAVAEGLWRLADYHEKKGEVGKAIKCLEAICQSNVSFFPVVEVKTRLRIATLLLTHSHNVNHAKSHLERSQLLLKSIPSCFELKCRAYSLLSQCYHLVG

Query:  AIPPQKQILYKGLDLTNSAGHELSVKLWSCNFNSQLANALIIEGDYQNSISALESGYIFSVEICYPELQV
        AIPPQKQILYKGLDLTNSAGHELSVKLWSCNFNSQLANALIIEGDYQNSISALESGYIFSVEICYPELQ+
Subjt:  AIPPQKQILYKGLDLTNSAGHELSVKLWSCNFNSQLANALIIEGDYQNSISALESGYIFSVEICYPELQV

SwissProt top hitse value%identityAlignment
B1H1Z8 MAU2 chromatid cohesion factor homolog8.1e-0828.03Show/hide
Query:  IKCLEAICQSNVSFFPVVEVKTRLRIATLLLTHSHNVNHAKSHLERSQLLLKSIPSCFELKCRAYSLLSQCYHLVGAIPPQKQILYKGLDLTNSAGHELS
        + CL+A+ Q   S    +E +T L++ ++L  H+ N   A+ HLE++ L+ + IP   ++K  A SLLS+ Y    ++   K +L K + ++    +   
Subjt:  IKCLEAICQSNVSFFPVVEVKTRLRIATLLLTHSHNVNHAKSHLERSQLLLKSIPSCFELKCRAYSLLSQCYHLVGAIPPQKQILYKGLDLTNSAGHELS

Query:  VKLWSCNFNSQLANALIIEGDYQNSISALESG
           W C    QLA    +E D  ++   L  G
Subjt:  VKLWSCNFNSQLANALIIEGDYQNSISALESG

B4ZIX8 MAU2 chromatid cohesion factor homolog6.9e-0727.61Show/hide
Query:  IKCLEAICQSNVSFFPV--VEVKTRLRIATLLLTHSHNVNHAKSHLERSQLLLKSIPSCFELKCRAYSLLSQCYHLVGAIPPQKQILYKGLDLTNSAGHE
        + CL+A+ Q    F P   +E +T L++ ++L  H+ N   A+ HLE++  + + IP   ++K  A SLLS+ Y    ++   K +L K + ++    + 
Subjt:  IKCLEAICQSNVSFFPV--VEVKTRLRIATLLLTHSHNVNHAKSHLERSQLLLKSIPSCFELKCRAYSLLSQCYHLVGAIPPQKQILYKGLDLTNSAGHE

Query:  LSVKLWSCNFNSQLANALIIEGDYQNSISALESG
             W C    QLA    +E D  ++   L  G
Subjt:  LSVKLWSCNFNSQLANALIIEGDYQNSISALESG

Q9D2X5 MAU2 chromatid cohesion factor homolog1.4e-0728.36Show/hide
Query:  IKCLEAICQSNVSFFPV--VEVKTRLRIATLLLTHSHNVNHAKSHLERSQLLLKSIPSCFELKCRAYSLLSQCYHLVGAIPPQKQILYKGLDLTNSAGHE
        + CL+A+      F P   +E +T L++ ++L  H+ N   A+SHLE++ L+ + IP   ++K  A SLLS+ Y    ++   K +L K + ++    + 
Subjt:  IKCLEAICQSNVSFFPV--VEVKTRLRIATLLLTHSHNVNHAKSHLERSQLLLKSIPSCFELKCRAYSLLSQCYHLVGAIPPQKQILYKGLDLTNSAGHE

Query:  LSVKLWSCNFNSQLANALIIEGDYQNSISALESG
             W C    QLA    +E D  ++   L  G
Subjt:  LSVKLWSCNFNSQLANALIIEGDYQNSISALESG

Q9FGN7 Sister chromatid cohesion protein SCC46.3e-6165.48Show/hide
Query:  AVAEGLWRLADYHEKKGEVGKAIKCLEAICQSNVSFFPVVEVKTRLRIATLLLTHSHNVNHAKSHLERSQLLLKSIPSCFELKCRAYSLLSQCYHLVGAI
        AVAEGLW LAD+H+K GE+GK IKCLEAICQS +SF P+VEVK+RLR+A LLL +SHNVNHAKSHLERS LLLKSIPS ++LK + YSLLS CYHL+ + 
Subjt:  AVAEGLWRLADYHEKKGEVGKAIKCLEAICQSNVSFFPVVEVKTRLRIATLLLTHSHNVNHAKSHLERSQLLLKSIPSCFELKCRAYSLLSQCYHLVGAI

Query:  PPQKQILYKGLDLTNSAGHELSVKLWSCNFNSQLANALIIEGDYQNSISALESGYIFSVEICYPELQV
        PPQ+ +L K L+L +S   ++S  LWSCNFNSQLAN  II+ D+ +S+SALESG++ +  IC+PELQ+
Subjt:  PPQKQILYKGLDLTNSAGHELSVKLWSCNFNSQLANALIIEGDYQNSISALESGYIFSVEICYPELQV

Q9Y6X3 MAU2 chromatid cohesion factor homolog1.4e-0728.36Show/hide
Query:  IKCLEAICQSNVSFFPV--VEVKTRLRIATLLLTHSHNVNHAKSHLERSQLLLKSIPSCFELKCRAYSLLSQCYHLVGAIPPQKQILYKGLDLTNSAGHE
        + CL+A+      F P   +E +T L++ ++L  H+ N   A+SHLE++ L+ + IP   ++K  A SLLS+ Y    ++   K +L K + ++    + 
Subjt:  IKCLEAICQSNVSFFPV--VEVKTRLRIATLLLTHSHNVNHAKSHLERSQLLLKSIPSCFELKCRAYSLLSQCYHLVGAIPPQKQILYKGLDLTNSAGHE

Query:  LSVKLWSCNFNSQLANALIIEGDYQNSISALESG
             W C    QLA    +E D  ++   L  G
Subjt:  LSVKLWSCNFNSQLANALIIEGDYQNSISALESG

Arabidopsis top hitse value%identityAlignment
AT5G51340.1 Tetratricopeptide repeat (TPR)-like superfamily protein4.5e-6265.48Show/hide
Query:  AVAEGLWRLADYHEKKGEVGKAIKCLEAICQSNVSFFPVVEVKTRLRIATLLLTHSHNVNHAKSHLERSQLLLKSIPSCFELKCRAYSLLSQCYHLVGAI
        AVAEGLW LAD+H+K GE+GK IKCLEAICQS +SF P+VEVK+RLR+A LLL +SHNVNHAKSHLERS LLLKSIPS ++LK + YSLLS CYHL+ + 
Subjt:  AVAEGLWRLADYHEKKGEVGKAIKCLEAICQSNVSFFPVVEVKTRLRIATLLLTHSHNVNHAKSHLERSQLLLKSIPSCFELKCRAYSLLSQCYHLVGAI

Query:  PPQKQILYKGLDLTNSAGHELSVKLWSCNFNSQLANALIIEGDYQNSISALESGYIFSVEICYPELQV
        PPQ+ +L K L+L +S   ++S  LWSCNFNSQLAN  II+ D+ +S+SALESG++ +  IC+PELQ+
Subjt:  PPQKQILYKGLDLTNSAGHELSVKLWSCNFNSQLANALIIEGDYQNSISALESGYIFSVEICYPELQV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCAGTGGCCGAGGGATTGTGGAGGCTGGCAGATTATCACGAGAAGAAGGGGGAAGTAGGGAAGGCAATAAAGTGTCTGGAAGCCATATGTCAGAGCAACGTGTC
CTTCTTTCCAGTCGTCGAGGTCAAGACTCGACTTCGAATTGCCACCCTCCTACTCACTCATTCTCACAACGTCAATCACGCCAAATCCCATCTTGAGCGTTCTCAATTGT
TACTGAAGTCTATTCCATCATGCTTCGAATTGAAGTGCCGGGCTTATAGCTTATTAAGCCAGTGTTATCATCTCGTTGGTGCTATTCCTCCTCAAAAACAGATTCTTTAT
AAGGGTCTTGATCTCACCAATTCTGCTGGTCATGAACTGTCAGTGAAGCTATGGTCGTGCAACTTCAATTCACAGCTAGCAAATGCTTTGATTATTGAAGGAGACTATCA
AAATTCGATCTCTGCTTTGGAGTCGGGGTACATATTTTCAGTTGAGATATGCTATCCTGAACTGCAGGTGTTAAGTGTTAACTGCCCTATAGAGAAAATGGGGAGGCTTG
CTAACGTGTTGTCCGCTGCCGCTAGTCTGCTACTATTCGCCAGTCACTGCTCAGCCGTTGCTGCCATTCCTCTGCCTGTGTTATTTGTGATTCTCAGAACATAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGCAGTGGCCGAGGGATTGTGGAGGCTGGCAGATTATCACGAGAAGAAGGGGGAAGTAGGGAAGGCAATAAAGTGTCTGGAAGCCATATGTCAGAGCAACGTGTC
CTTCTTTCCAGTCGTCGAGGTCAAGACTCGACTTCGAATTGCCACCCTCCTACTCACTCATTCTCACAACGTCAATCACGCCAAATCCCATCTTGAGCGTTCTCAATTGT
TACTGAAGTCTATTCCATCATGCTTCGAATTGAAGTGCCGGGCTTATAGCTTATTAAGCCAGTGTTATCATCTCGTTGGTGCTATTCCTCCTCAAAAACAGATTCTTTAT
AAGGGTCTTGATCTCACCAATTCTGCTGGTCATGAACTGTCAGTGAAGCTATGGTCGTGCAACTTCAATTCACAGCTAGCAAATGCTTTGATTATTGAAGGAGACTATCA
AAATTCGATCTCTGCTTTGGAGTCGGGGTACATATTTTCAGTTGAGATATGCTATCCTGAACTGCAGGTGTTAAGTGTTAACTGCCCTATAGAGAAAATGGGGAGGCTTG
CTAACGTGTTGTCCGCTGCCGCTAGTCTGCTACTATTCGCCAGTCACTGCTCAGCCGTTGCTGCCATTCCTCTGCCTGTGTTATTTGTGATTCTCAGAACATAG
Protein sequenceShow/hide protein sequence
MEAVAEGLWRLADYHEKKGEVGKAIKCLEAICQSNVSFFPVVEVKTRLRIATLLLTHSHNVNHAKSHLERSQLLLKSIPSCFELKCRAYSLLSQCYHLVGAIPPQKQILY
KGLDLTNSAGHELSVKLWSCNFNSQLANALIIEGDYQNSISALESGYIFSVEICYPELQVLSVNCPIEKMGRLANVLSAAASLLLFASHCSAVAAIPLPVLFVILRT