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Spg005944 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg005944
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionZinc finger, C3HC4 type family protein
Genome locationscaffold11:2994983..2996651
RNA-Seq ExpressionSpg005944
SyntenySpg005944
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607218.1 hypothetical protein SDJN03_00560, partial [Cucurbita argyrosperma subsp. sororia]7.6e-3692.86Show/hide
Query:  MISILAQERLLGAALGSVFAGVVVFEQRKSLYRSISENYPPATQSPMRKPVLAKKYGPEVLHLWNRAVDQTFGPVIQALSSRGW
        MISILAQERLLGAALGSVF GVVVFEQRKS+YRSISENYPPATQSPM+K VLAKKYGPE+ HLWNRAVDQTFGPVIQALSSRGW
Subjt:  MISILAQERLLGAALGSVFAGVVVFEQRKSLYRSISENYPPATQSPMRKPVLAKKYGPEVLHLWNRAVDQTFGPVIQALSSRGW
XP_004152895.1 uncharacterized protein LOC101206005 isoform X2 [Cucumis sativus]4.5e-3694.05Show/hide
Query:  MISILAQERLLGAALGSVFAGVVVFEQRKSLYRSISENYPPATQSPMRKPVLAKKYGPEVLHLWNRAVDQTFGPVIQALSSRGW
        MIS+LAQERLLG ALGSVFAGVVVFEQRKSLY+SISENYPPATQSPMRKPVLAKKYGPE  HLWNRAVDQTFGPVIQALSSRGW
Subjt:  MISILAQERLLGAALGSVFAGVVVFEQRKSLYRSISENYPPATQSPMRKPVLAKKYGPEVLHLWNRAVDQTFGPVIQALSSRGW
XP_008457526.1 PREDICTED: uncharacterized protein LOC103497197 isoform X2 [Cucumis melo]2.9e-3591.67Show/hide
Query:  MISILAQERLLGAALGSVFAGVVVFEQRKSLYRSISENYPPATQSPMRKPVLAKKYGPEVLHLWNRAVDQTFGPVIQALSSRGW
        MIS+LAQERLLG ALGS FAGVVVFEQRKSLY+SISENYPPATQSPMRKPVLAKKYGPE  HLWNRAVDQTFGP+IQALSSRGW
Subjt:  MISILAQERLLGAALGSVFAGVVVFEQRKSLYRSISENYPPATQSPMRKPVLAKKYGPEVLHLWNRAVDQTFGPVIQALSSRGW
XP_022156577.1 uncharacterized protein LOC111023455 [Momordica charantia]1.2e-3695.24Show/hide
Query:  MISILAQERLLGAALGSVFAGVVVFEQRKSLYRSISENYPPATQSPMRKPVLAKKYGPEVLHLWNRAVDQTFGPVIQALSSRGW
        MISILAQERLLGAALGSVFAGVVVFEQRKSLYRSISENYPPA QSPMRKPV+AKKYGPEV HLWNRAVDQTFGP+IQALSSRGW
Subjt:  MISILAQERLLGAALGSVFAGVVVFEQRKSLYRSISENYPPATQSPMRKPVLAKKYGPEVLHLWNRAVDQTFGPVIQALSSRGW
XP_023519919.1 uncharacterized protein LOC111783242 [Cucurbita pepo subsp. pepo]3.8e-3592.86Show/hide
Query:  MISILAQERLLGAALGSVFAGVVVFEQRKSLYRSISENYPPATQSPMRKPVLAKKYGPEVLHLWNRAVDQTFGPVIQALSSRGW
        MISILAQERLLGAALGSVFAGVVVFEQRKSLY SIS+NYPP TQSPMRKPVLAKKYGPE  HLWN AVDQTFGPVIQALSSRGW
Subjt:  MISILAQERLLGAALGSVFAGVVVFEQRKSLYRSISENYPPATQSPMRKPVLAKKYGPEVLHLWNRAVDQTFGPVIQALSSRGW
TrEMBL top hitse value%identityAlignment
A0A0A0LXB2 Uncharacterized protein2.2e-3694.05Show/hide
Query:  MISILAQERLLGAALGSVFAGVVVFEQRKSLYRSISENYPPATQSPMRKPVLAKKYGPEVLHLWNRAVDQTFGPVIQALSSRGW
        MIS+LAQERLLG ALGSVFAGVVVFEQRKSLY+SISENYPPATQSPMRKPVLAKKYGPE  HLWNRAVDQTFGPVIQALSSRGW
Subjt:  MISILAQERLLGAALGSVFAGVVVFEQRKSLYRSISENYPPATQSPMRKPVLAKKYGPEVLHLWNRAVDQTFGPVIQALSSRGW
A0A1S3C5P6 uncharacterized protein LOC103497197 isoform X21.4e-3591.67Show/hide
Query:  MISILAQERLLGAALGSVFAGVVVFEQRKSLYRSISENYPPATQSPMRKPVLAKKYGPEVLHLWNRAVDQTFGPVIQALSSRGW
        MIS+LAQERLLG ALGS FAGVVVFEQRKSLY+SISENYPPATQSPMRKPVLAKKYGPE  HLWNRAVDQTFGP+IQALSSRGW
Subjt:  MISILAQERLLGAALGSVFAGVVVFEQRKSLYRSISENYPPATQSPMRKPVLAKKYGPEVLHLWNRAVDQTFGPVIQALSSRGW
A0A5D3BR76 Uncharacterized protein1.4e-3591.67Show/hide
Query:  MISILAQERLLGAALGSVFAGVVVFEQRKSLYRSISENYPPATQSPMRKPVLAKKYGPEVLHLWNRAVDQTFGPVIQALSSRGW
        MIS+LAQERLLG ALGS FAGVVVFEQRKSLY+SISENYPPATQSPMRKPVLAKKYGPE  HLWNRAVDQTFGP+IQALSSRGW
Subjt:  MISILAQERLLGAALGSVFAGVVVFEQRKSLYRSISENYPPATQSPMRKPVLAKKYGPEVLHLWNRAVDQTFGPVIQALSSRGW
A0A6J1DSC3 uncharacterized protein LOC1110234555.7e-3795.24Show/hide
Query:  MISILAQERLLGAALGSVFAGVVVFEQRKSLYRSISENYPPATQSPMRKPVLAKKYGPEVLHLWNRAVDQTFGPVIQALSSRGW
        MISILAQERLLGAALGSVFAGVVVFEQRKSLYRSISENYPPA QSPMRKPV+AKKYGPEV HLWNRAVDQTFGP+IQALSSRGW
Subjt:  MISILAQERLLGAALGSVFAGVVVFEQRKSLYRSISENYPPATQSPMRKPVLAKKYGPEVLHLWNRAVDQTFGPVIQALSSRGW
A0A6J1HZ79 uncharacterized protein LOC1114694463.1e-3592.86Show/hide
Query:  MISILAQERLLGAALGSVFAGVVVFEQRKSLYRSISENYPPATQSPMRKPVLAKKYGPEVLHLWNRAVDQTFGPVIQALSSRGW
        MISILAQERLLGAALGSVFAGVVVFEQRKSLY SIS+NYPP TQSPMRKPVLAKKYGPE  HLWN AVDQTFGPVIQALSSRGW
Subjt:  MISILAQERLLGAALGSVFAGVVVFEQRKSLYRSISENYPPATQSPMRKPVLAKKYGPEVLHLWNRAVDQTFGPVIQALSSRGW
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G28430.1 unknown protein5.0e-1752.94Show/hide
Query:  MISILAQERLLGAALGSVFAGVVVFEQRKSLYRSISE-NYPPATQSPMRKPVLAKKYGPEVLHLWNRAVDQTFGPVIQALSSRGW
        MISILAQERLLG  LGS   G +VFEQRK ++ S+S+       Q+ +   +  KKY  E   LWN+AVDQTF P I+ LSSR W
Subjt:  MISILAQERLLGAALGSVFAGVVVFEQRKSLYRSISE-NYPPATQSPMRKPVLAKKYGPEVLHLWNRAVDQTFGPVIQALSSRGW

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTTCCATTCTCGCTCAGGAGCGACTGCTTGGTGCTGCATTGGGAAGCGTATTCGCCGGGGTTGTTGTTTTTGAGCAGCGGAAAAGCTTATACAGGTCCATTTCGGA
AAACTATCCACCAGCCACCCAATCTCCGATGAGAAAACCTGTACTAGCAAAGAAATATGGCCCAGAGGTTTTGCACCTGTGGAATAGAGCTGTGGACCAGACATTTGGAC
CCGTGATTCAGGCTCTCAGTTCTCGGGGATGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGATTTCCATTCTCGCTCAGGAGCGACTGCTTGGTGCTGCATTGGGAAGCGTATTCGCCGGGGTTGTTGTTTTTGAGCAGCGGAAAAGCTTATACAGGTCCATTTCGGA
AAACTATCCACCAGCCACCCAATCTCCGATGAGAAAACCTGTACTAGCAAAGAAATATGGCCCAGAGGTTTTGCACCTGTGGAATAGAGCTGTGGACCAGACATTTGGAC
CCGTGATTCAGGCTCTCAGTTCTCGGGGATGGTGA
Protein sequenceShow/hide protein sequence
MISILAQERLLGAALGSVFAGVVVFEQRKSLYRSISENYPPATQSPMRKPVLAKKYGPEVLHLWNRAVDQTFGPVIQALSSRGW