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Spg005967 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg005967
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionDUF21 domain-containing protein
Genome locationscaffold11:82586..86093
RNA-Seq ExpressionSpg005967
SyntenySpg005967
Gene Ontology termsNA
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK07901.1 DUF21 domain-containing protein [Cucumis melo var. makuwa]5.2e-0547.69Show/hide
Query:  MSWKLEKSSTYTAKSMFQSLTSSSPKINQTTSSLIWKHKSPKKVKVFLWPLAYRSLNTDEKLQRN
        + W L  + ++T KS F  LT  SP I       IWK K  K+VK FLW LAYRSLNT +K+Q++
Subjt:  MSWKLEKSSTYTAKSMFQSLTSSSPKINQTTSSLIWKHKSPKKVKVFLWPLAYRSLNTDEKLQRN
TYK31299.1 protein FAM91A1 [Cucumis melo var. makuwa]4.2e-0753.12Show/hide
Query:  MSWKLEKSSTYTAKSMFQSLTSSSPKINQTTSSLIWKHKSPKKVKVFLWPLAYRSLNTDEKLQR
        + WKLE S  ++ K +F  +T  + K N +T +LIWK K  KKVK FLW LAYRSLN   KLQR
Subjt:  MSWKLEKSSTYTAKSMFQSLTSSSPKINQTTSSLIWKHKSPKKVKVFLWPLAYRSLNTDEKLQR
TrEMBL top hitse value%identityAlignment
A0A5D3C7R2 DUF21 domain-containing protein2.5e-0547.69Show/hide
Query:  MSWKLEKSSTYTAKSMFQSLTSSSPKINQTTSSLIWKHKSPKKVKVFLWPLAYRSLNTDEKLQRN
        + W L  + ++T KS F  LT  SP I       IWK K  K+VK FLW LAYRSLNT +K+Q++
Subjt:  MSWKLEKSSTYTAKSMFQSLTSSSPKINQTTSSLIWKHKSPKKVKVFLWPLAYRSLNTDEKLQRN
A0A5D3E632 Protein FAM91A12.0e-0753.12Show/hide
Query:  MSWKLEKSSTYTAKSMFQSLTSSSPKINQTTSSLIWKHKSPKKVKVFLWPLAYRSLNTDEKLQR
        + WKLE S  ++ K +F  +T  + K N +T +LIWK K  KKVK FLW LAYRSLN   KLQR
Subjt:  MSWKLEKSSTYTAKSMFQSLTSSSPKINQTTSSLIWKHKSPKKVKVFLWPLAYRSLNTDEKLQR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTGGAAGCTGGAAAAGTCAAGCACCTACACGGCTAAGTCCATGTTTCAGTCTTTAACTTCCTCATCTCCCAAGATAAATCAAACCACCAGTAGCTTGATATGGAA
GCATAAAAGCCCCAAGAAGGTGAAAGTTTTTCTATGGCCTCTTGCCTATAGGAGTCTTAATACCGATGAGAAGCTTCAAAGAAATGGTGGTACTGATAGTAGAGTAGCTG
CTGGTAGGCAAGGGCTCAAGGTTGAAAATTTCCTTAATGTTGGAGGTAGTATTCTTCCCCACTTGAAGAATCAGAATCTTGGAACATATGTCCTCCAAATGCTGGAGCAA
CTTGTTCCTGCCTCCCAAGATTTCCAGCATTGGTTTCTGCCTCTACTTGTTCTTGCTGGTCATTCAAATTGGGCTGTTGTAGGTGTTCCACCAACAGCAAGCGTTGGGGG
AAAGTTTTGGGAGAAAGAATTATGGGTGAAGAAGTGGACTCAAGCCCTTTCCCATACGAGTGGTAGTTTTTTTCCCCGCGCAGCTCTGATACCACATTTGGTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGTTGGAAGCTGGAAAAGTCAAGCACCTACACGGCTAAGTCCATGTTTCAGTCTTTAACTTCCTCATCTCCCAAGATAAATCAAACCACCAGTAGCTTGATATGGAA
GCATAAAAGCCCCAAGAAGGTGAAAGTTTTTCTATGGCCTCTTGCCTATAGGAGTCTTAATACCGATGAGAAGCTTCAAAGAAATGGTGGTACTGATAGTAGAGTAGCTG
CTGGTAGGCAAGGGCTCAAGGTTGAAAATTTCCTTAATGTTGGAGGTAGTATTCTTCCCCACTTGAAGAATCAGAATCTTGGAACATATGTCCTCCAAATGCTGGAGCAA
CTTGTTCCTGCCTCCCAAGATTTCCAGCATTGGTTTCTGCCTCTACTTGTTCTTGCTGGTCATTCAAATTGGGCTGTTGTAGGTGTTCCACCAACAGCAAGCGTTGGGGG
AAAGTTTTGGGAGAAAGAATTATGGGTGAAGAAGTGGACTCAAGCCCTTTCCCATACGAGTGGTAGTTTTTTTCCCCGCGCAGCTCTGATACCACATTTGGTGTAG
Protein sequenceShow/hide protein sequence
MSWKLEKSSTYTAKSMFQSLTSSSPKINQTTSSLIWKHKSPKKVKVFLWPLAYRSLNTDEKLQRNGGTDSRVAAGRQGLKVENFLNVGGSILPHLKNQNLGTYVLQMLEQ
LVPASQDFQHWFLPLLVLAGHSNWAVVGVPPTASVGGKFWEKELWVKKWTQALSHTSGSFFPRAALIPHLV