; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg005994 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg005994
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationscaffold11:1648816..1652341
RNA-Seq ExpressionSpg005994
SyntenySpg005994
Gene Ontology termsGO:0006511 - ubiquitin-dependent protein catabolic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily
IPR044795 - Pentatricopeptide repeat-containing protein THA8L-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022158131.1 pentatricopeptide repeat-containing protein At3g46870 [Momordica charantia]1.7e-13191.76Show/hide
Query:  MPIQGFSRSKLPILASVLLRALTRRPIRDIPFPVKSAFAGFQPDSSRPLCGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLRRFKEDEEKLQKFMKNHV
        M I+GFSRSKLPI ASV LR LTRRPIRDIP PVKS   GFQPDSSRP+CGFR YHDGRPRGPLWRSRKAIGKEALFVIQGL+RFKEDEEKLQKFMK+HV
Subjt:  MPIQGFSRSKLPILASVLLRALTRRPIRDIPFPVKSAFAGFQPDSSRPLCGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLRRFKEDEEKLQKFMKNHV

Query:  SRLLKLDMIAVLGELERQEEVALSVKIFRLIQKQDWYKPDVFMYKDLIVALAKSKKMDDAMELWESMRKENLFPDSQTYTEVIRGFLRFGSPSDAMNIYE
        SRLLKLDMI+VLGELERQEEVAL+VKIFRLIQKQDWYKPDVFMYKDLI+ALA SKKMDDAMELWESMRKE+LFPDSQTYTEVIRGFLR+GSPSDAMNIYE
Subjt:  SRLLKLDMIAVLGELERQEEVALSVKIFRLIQKQDWYKPDVFMYKDLIVALAKSKKMDDAMELWESMRKENLFPDSQTYTEVIRGFLRFGSPSDAMNIYE

Query:  DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVYDPPEEIFGLR
        DMKKSPDPPDELPFRILLKGLLPHPLLRN+VKQDFEELFPDQ+VYDPPEEIFGLR
Subjt:  DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVYDPPEEIFGLR

XP_022964699.1 protein THYLAKOID ASSEMBLY 8-like, chloroplastic [Cucurbita moschata]1.5e-12789.41Show/hide
Query:  MPIQGFSRSKLPILASVLLRALTRRPIRDIPFPVKSAFAGFQPDSSRPLCGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLRRFKEDEEKLQKFMKNHV
        M ++ FS+ KLPI  SV LR L RRPIRDIP PVKS  AGFQPDSSRPL GFRLYHDGRPRGPLWRSRKAIGKEALFVIQGL+RFKEDEEKLQKFMK HV
Subjt:  MPIQGFSRSKLPILASVLLRALTRRPIRDIPFPVKSAFAGFQPDSSRPLCGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLRRFKEDEEKLQKFMKNHV

Query:  SRLLKLDMIAVLGELERQEEVALSVKIFRLIQKQDWYKPDVFMYKDLIVALAKSKKMDDAMELWESMRKENLFPDSQTYTEVIRGFLRFGSPSDAMNIYE
         RLLKLDMIAVLGELERQEEVAL+VK+FRLIQKQ+WYKPDVF+YKDLIVALA+SK+MDDAMELWESMRKENLFPDSQTYTEVIRGFL++GSPSDAMNIYE
Subjt:  SRLLKLDMIAVLGELERQEEVALSVKIFRLIQKQDWYKPDVFMYKDLIVALAKSKKMDDAMELWESMRKENLFPDSQTYTEVIRGFLRFGSPSDAMNIYE

Query:  DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVYDPPEEIFGLR
        DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEE+FPDQHVYDPPEEIFGLR
Subjt:  DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVYDPPEEIFGLR

XP_022970562.1 protein THYLAKOID ASSEMBLY 8-like, chloroplastic [Cucurbita maxima]3.4e-12789.8Show/hide
Query:  MPIQGFSRSKLPILASVLLRALTRRPIRDIPFPVKSAFAGFQPDSSRPLCGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLRRFKEDEEKLQKFMKNHV
        M ++ FS+SKLPI  SV LR LTRRPIRDIP PVKS  AGF PDSSR L GFRLYHDGRPRGPLWRSRKAIGKEALFVIQGL+RFKEDEEKLQKFMK HV
Subjt:  MPIQGFSRSKLPILASVLLRALTRRPIRDIPFPVKSAFAGFQPDSSRPLCGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLRRFKEDEEKLQKFMKNHV

Query:  SRLLKLDMIAVLGELERQEEVALSVKIFRLIQKQDWYKPDVFMYKDLIVALAKSKKMDDAMELWESMRKENLFPDSQTYTEVIRGFLRFGSPSDAMNIYE
         RLLKLDMIAVLGELERQEEVAL+VK+FRLIQKQ+W+KPDVF+YKDLIVALA+SKKMDDAMELWESMRKENLFPDSQTYTEVIRGFL++GSPSDAMNIYE
Subjt:  SRLLKLDMIAVLGELERQEEVALSVKIFRLIQKQDWYKPDVFMYKDLIVALAKSKKMDDAMELWESMRKENLFPDSQTYTEVIRGFLRFGSPSDAMNIYE

Query:  DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVYDPPEEIFGLR
        DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVYDPPEEIFGLR
Subjt:  DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVYDPPEEIFGLR

XP_023519300.1 protein THYLAKOID ASSEMBLY 8-like, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo]7.5e-12789.02Show/hide
Query:  MPIQGFSRSKLPILASVLLRALTRRPIRDIPFPVKSAFAGFQPDSSRPLCGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLRRFKEDEEKLQKFMKNHV
        M ++ FS+SKLPI  SV LR LT RPIRDI  PVKS  AGFQPDSS+PL GFRLYHDGRPRGPLWRSRKAIGKEALFVIQGL+RFKEDEEKLQKFMK HV
Subjt:  MPIQGFSRSKLPILASVLLRALTRRPIRDIPFPVKSAFAGFQPDSSRPLCGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLRRFKEDEEKLQKFMKNHV

Query:  SRLLKLDMIAVLGELERQEEVALSVKIFRLIQKQDWYKPDVFMYKDLIVALAKSKKMDDAMELWESMRKENLFPDSQTYTEVIRGFLRFGSPSDAMNIYE
         RLLKLDMIAVLGELERQEEVAL+VK+FRLIQKQ+WYKPDVF+YKDLIVALA+SK+MDDAMELWESMRKENLFPDSQTYTEVIRGFL++GSPSDAMNIYE
Subjt:  SRLLKLDMIAVLGELERQEEVALSVKIFRLIQKQDWYKPDVFMYKDLIVALAKSKKMDDAMELWESMRKENLFPDSQTYTEVIRGFLRFGSPSDAMNIYE

Query:  DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVYDPPEEIFGLR
        DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEE+FPDQHVYDPPEEIFGLR
Subjt:  DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVYDPPEEIFGLR

XP_038895593.1 protein THYLAKOID ASSEMBLY 8-like, chloroplastic [Benincasa hispida]1.4e-12890.2Show/hide
Query:  MPIQGFSRSKLPILASVLLRALTRRPIRDIPFPVKSAFAGFQPDSSRPLCGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLRRFKEDEEKLQKFMKNHV
        M I+ FSRSKLPI ASV LR LTRRPIRD   PVKS   GFQPDSSRPL GFRLYHDGRPRGPLWRSRKAIGKEALFVIQGL+RFKEDEEKL+KFMK+HV
Subjt:  MPIQGFSRSKLPILASVLLRALTRRPIRDIPFPVKSAFAGFQPDSSRPLCGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLRRFKEDEEKLQKFMKNHV

Query:  SRLLKLDMIAVLGELERQEEVALSVKIFRLIQKQDWYKPDVFMYKDLIVALAKSKKMDDAMELWESMRKENLFPDSQTYTEVIRGFLRFGSPSDAMNIYE
         RLLKLDMI+VLGELERQEEVAL+VKIFRLIQKQDWYKPDVF+YKDLI+ALA+SKKMDDAM+LWESMR+ENLFPDSQTYTEVIRGFLR+GSPSDAMNIYE
Subjt:  SRLLKLDMIAVLGELERQEEVALSVKIFRLIQKQDWYKPDVFMYKDLIVALAKSKKMDDAMELWESMRKENLFPDSQTYTEVIRGFLRFGSPSDAMNIYE

Query:  DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVYDPPEEIFGLR
        DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVYDPPEEIFGLR
Subjt:  DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVYDPPEEIFGLR

TrEMBL top hitse value%identityAlignment
A0A0A0LVE9 Uncharacterized protein1.4e-12686.67Show/hide
Query:  MPIQGFSRSKLPILASVLLRALTRRPIRDIPFPVKSAFAGFQPDSSRPLCGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLRRFKEDEEKLQKFMKNHV
        M I+ FSRSKLP+ ASV L+ LTRRPIRD+P PVKS    FQPDS RP+ GFRLYHDGRPRGPLWRSRKAIGKEALFVIQGL+RFKEDEEK +KFMK+HV
Subjt:  MPIQGFSRSKLPILASVLLRALTRRPIRDIPFPVKSAFAGFQPDSSRPLCGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLRRFKEDEEKLQKFMKNHV

Query:  SRLLKLDMIAVLGELERQEEVALSVKIFRLIQKQDWYKPDVFMYKDLIVALAKSKKMDDAMELWESMRKENLFPDSQTYTEVIRGFLRFGSPSDAMNIYE
        SRLLKLDM+AVLGELERQEEVAL+VKIFRLI+KQDWYKPDV++YKDLI+ALA+SKKMDDAM+LWESMR+ENLFPDSQTYTEVIRGFLR+GSPSDAMN+YE
Subjt:  SRLLKLDMIAVLGELERQEEVALSVKIFRLIQKQDWYKPDVFMYKDLIVALAKSKKMDDAMELWESMRKENLFPDSQTYTEVIRGFLRFGSPSDAMNIYE

Query:  DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVYDPPEEIFGLR
        DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHV+DPPEEIF LR
Subjt:  DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVYDPPEEIFGLR

A0A5A7SRJ7 Pentatricopeptide repeat-containing protein1.4e-12687.45Show/hide
Query:  MPIQGFSRSKLPILASVLLRALTRRPIRDIPFPVKSAFAGFQPDSSRPLCGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLRRFKEDEEKLQKFMKNHV
        M I+ FSRSKLPI A V LR LTRRPIRD+P PV S   GFQPDSSRP+ GFRLYHDGRPRGPLWRSRKAIGKEALFVIQGL+RFKEDEEKL KFMK+HV
Subjt:  MPIQGFSRSKLPILASVLLRALTRRPIRDIPFPVKSAFAGFQPDSSRPLCGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLRRFKEDEEKLQKFMKNHV

Query:  SRLLKLDMIAVLGELERQEEVALSVKIFRLIQKQDWYKPDVFMYKDLIVALAKSKKMDDAMELWESMRKENLFPDSQTYTEVIRGFLRFGSPSDAMNIYE
        SRLLKLDM+AVLGELERQEEVAL+VKIFRLI+KQDWYKPDV++YKDLI+ALA+SKKMDDAM+LWESMR+ENLFPDSQTYTEVIRGFLR+GSPSDAMN+YE
Subjt:  SRLLKLDMIAVLGELERQEEVALSVKIFRLIQKQDWYKPDVFMYKDLIVALAKSKKMDDAMELWESMRKENLFPDSQTYTEVIRGFLRFGSPSDAMNIYE

Query:  DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVYDPPEEIFGLR
        DMKKSP+PPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHV+DPPEEIF LR
Subjt:  DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVYDPPEEIFGLR

A0A6J1E045 pentatricopeptide repeat-containing protein At3g468708.3e-13291.76Show/hide
Query:  MPIQGFSRSKLPILASVLLRALTRRPIRDIPFPVKSAFAGFQPDSSRPLCGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLRRFKEDEEKLQKFMKNHV
        M I+GFSRSKLPI ASV LR LTRRPIRDIP PVKS   GFQPDSSRP+CGFR YHDGRPRGPLWRSRKAIGKEALFVIQGL+RFKEDEEKLQKFMK+HV
Subjt:  MPIQGFSRSKLPILASVLLRALTRRPIRDIPFPVKSAFAGFQPDSSRPLCGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLRRFKEDEEKLQKFMKNHV

Query:  SRLLKLDMIAVLGELERQEEVALSVKIFRLIQKQDWYKPDVFMYKDLIVALAKSKKMDDAMELWESMRKENLFPDSQTYTEVIRGFLRFGSPSDAMNIYE
        SRLLKLDMI+VLGELERQEEVAL+VKIFRLIQKQDWYKPDVFMYKDLI+ALA SKKMDDAMELWESMRKE+LFPDSQTYTEVIRGFLR+GSPSDAMNIYE
Subjt:  SRLLKLDMIAVLGELERQEEVALSVKIFRLIQKQDWYKPDVFMYKDLIVALAKSKKMDDAMELWESMRKENLFPDSQTYTEVIRGFLRFGSPSDAMNIYE

Query:  DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVYDPPEEIFGLR
        DMKKSPDPPDELPFRILLKGLLPHPLLRN+VKQDFEELFPDQ+VYDPPEEIFGLR
Subjt:  DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVYDPPEEIFGLR

A0A6J1HLK1 protein THYLAKOID ASSEMBLY 8-like, chloroplastic7.3e-12889.41Show/hide
Query:  MPIQGFSRSKLPILASVLLRALTRRPIRDIPFPVKSAFAGFQPDSSRPLCGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLRRFKEDEEKLQKFMKNHV
        M ++ FS+ KLPI  SV LR L RRPIRDIP PVKS  AGFQPDSSRPL GFRLYHDGRPRGPLWRSRKAIGKEALFVIQGL+RFKEDEEKLQKFMK HV
Subjt:  MPIQGFSRSKLPILASVLLRALTRRPIRDIPFPVKSAFAGFQPDSSRPLCGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLRRFKEDEEKLQKFMKNHV

Query:  SRLLKLDMIAVLGELERQEEVALSVKIFRLIQKQDWYKPDVFMYKDLIVALAKSKKMDDAMELWESMRKENLFPDSQTYTEVIRGFLRFGSPSDAMNIYE
         RLLKLDMIAVLGELERQEEVAL+VK+FRLIQKQ+WYKPDVF+YKDLIVALA+SK+MDDAMELWESMRKENLFPDSQTYTEVIRGFL++GSPSDAMNIYE
Subjt:  SRLLKLDMIAVLGELERQEEVALSVKIFRLIQKQDWYKPDVFMYKDLIVALAKSKKMDDAMELWESMRKENLFPDSQTYTEVIRGFLRFGSPSDAMNIYE

Query:  DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVYDPPEEIFGLR
        DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEE+FPDQHVYDPPEEIFGLR
Subjt:  DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVYDPPEEIFGLR

A0A6J1I496 protein THYLAKOID ASSEMBLY 8-like, chloroplastic1.6e-12789.8Show/hide
Query:  MPIQGFSRSKLPILASVLLRALTRRPIRDIPFPVKSAFAGFQPDSSRPLCGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLRRFKEDEEKLQKFMKNHV
        M ++ FS+SKLPI  SV LR LTRRPIRDIP PVKS  AGF PDSSR L GFRLYHDGRPRGPLWRSRKAIGKEALFVIQGL+RFKEDEEKLQKFMK HV
Subjt:  MPIQGFSRSKLPILASVLLRALTRRPIRDIPFPVKSAFAGFQPDSSRPLCGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLRRFKEDEEKLQKFMKNHV

Query:  SRLLKLDMIAVLGELERQEEVALSVKIFRLIQKQDWYKPDVFMYKDLIVALAKSKKMDDAMELWESMRKENLFPDSQTYTEVIRGFLRFGSPSDAMNIYE
         RLLKLDMIAVLGELERQEEVAL+VK+FRLIQKQ+W+KPDVF+YKDLIVALA+SKKMDDAMELWESMRKENLFPDSQTYTEVIRGFL++GSPSDAMNIYE
Subjt:  SRLLKLDMIAVLGELERQEEVALSVKIFRLIQKQDWYKPDVFMYKDLIVALAKSKKMDDAMELWESMRKENLFPDSQTYTEVIRGFLRFGSPSDAMNIYE

Query:  DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVYDPPEEIFGLR
        DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVYDPPEEIFGLR
Subjt:  DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVYDPPEEIFGLR

SwissProt top hitse value%identityAlignment
Q1PFH7 Pentatricopeptide repeat-containing protein At1g623508.8e-4644.75Show/hide
Query:  IGKEALFVIQGLRRFKEDEEKLQKFMKNHVSRLLKLDMIAVLGELERQEEVALSVKIFRLIQKQDWYKPDVFMYKDLIVALAKSKKMDDAMELWESMRKE
        + KE L   + L+R +    +L +F+ +HVSRLLK D+++VL E +RQ +V L +K++ +++++ WY+PD+F Y+D+++ LA++KK+D+  ++WE ++KE
Subjt:  IGKEALFVIQGLRRFKEDEEKLQKFMKNHVSRLLKLDMIAVLGELERQEEVALSVKIFRLIQKQDWYKPDVFMYKDLIVALAKSKKMDDAMELWESMRKE

Query:  NLFPDSQTYTEVIRGFLRFGSPSDAMNIYEDMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVYDPPEEI
         +  D  T+ +++RGFL    P +AM +Y +M++SPD P  LPFR++LKGL+P+P LR +VK DF ELFP   VYDPPE+I
Subjt:  NLFPDSQTYTEVIRGFLRFGSPSDAMNIYEDMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVYDPPEEI

Q76C99 Protein Rf1, mitochondrial1.5e-0833.75Show/hide
Query:  PDVFMYKDLIVALAKSKKMDDAMELWESMRKENLFPDSQTYTEVIRGFLRFGSPSDAMNIYEDMKKSPDPPDELPFRILL
        PDV  Y  +I AL K++ MD AME+  +M K  + PD  TY  ++ G+   G P +A+   + M+     PD + + +L+
Subjt:  PDVFMYKDLIVALAKSKKMDDAMELWESMRKENLFPDSQTYTEVIRGFLRFGSPSDAMNIYEDMKKSPDPPDELPFRILL

Q9FKC3 Pentatricopeptide repeat-containing protein At5g48730, chloroplastic5.0e-0929.11Show/hide
Query:  RSRKAIGKEALFVIQGLRRFKEDEEKLQKFMKNHVSRLLKLDMIAVLGELERQEEVALSVKIFRLIQKQDWYKPDVFMYKDLIVALAKSKKMDDAMELWE
        ++ K   ++A+ +I      K   EK     K    +LL   ++  L E         ++++F L+++Q WYKP+V +Y  LIV L K K+ + A EL++
Subjt:  RSRKAIGKEALFVIQGLRRFKEDEEKLQKFMKNHVSRLLKLDMIAVLGELERQEEVALSVKIFRLIQKQDWYKPDVFMYKDLIVALAKSKKMDDAMELWE

Query:  SMRKENLFPDSQTYTEVIRGFLRFGSPSDAMNIYEDMKKSPD-PPDELPFRILLKGLL
         M  E    + + YT ++  + R G    A  + E MK S +  PD   + IL+K  L
Subjt:  SMRKENLFPDSQTYTEVIRGFLRFGSPSDAMNIYEDMKKSPD-PPDELPFRILLKGLL

Q9FMQ1 Pentatricopeptide repeat-containing protein At5g12100, mitochondrial3.0e-0935.29Show/hide
Query:  EVALSVKIFRLIQKQDWYKPDVFMYKDLIVALAKSKKMDDAMELWESMRKENLFPDSQTYTEVIRGFLRFGSPSDAMNIYEDMKKSPDPPDELPFRILLK
        +V   +++F  + K D   P VF+Y  LI  L K K+M+DA +L++ M    L P   TY  +I G+ + G+P  +  + E MK     P  + F  LLK
Subjt:  EVALSVKIFRLIQKQDWYKPDVFMYKDLIVALAKSKKMDDAMELWESMRKENLFPDSQTYTEVIRGFLRFGSPSDAMNIYEDMKKSPDPPDELPFRILLK

Query:  GL
        GL
Subjt:  GL

Q9STF9 Protein THYLAKOID ASSEMBLY 8-like, chloroplastic2.4e-9669.92Show/hide
Query:  KLPILASVLLRALTRRP-IRDIPFPVKSAFAGFQPDSSRPLCGF-RLYHDGRPRGPLWRSRKAIGKEALFVIQGLRRFKEDEEKLQKFMKNHVSRLLKLD
        K P  AS+  + +TR P I  I F          P   +P   F   +HDGRPRGPLWR +K IGKEALFVI GL+R KED+EKL KF+K HV RLLKLD
Subjt:  KLPILASVLLRALTRRP-IRDIPFPVKSAFAGFQPDSSRPLCGF-RLYHDGRPRGPLWRSRKAIGKEALFVIQGLRRFKEDEEKLQKFMKNHVSRLLKLD

Query:  MIAVLGELERQEEVALSVKIFRLIQKQDWYKPDVFMYKDLIVALAKSKKMDDAMELWESMRKENLFPDSQTYTEVIRGFLRFGSPSDAMNIYEDMKKSPD
        M+AV+GELERQEE AL++K+F +IQKQ+WY+PDVFMYKDLIV+LAKSK+MD+AM LWE M+KENLFPDSQTYTEVIRGFLR G P+DAMN+YEDM KSPD
Subjt:  MIAVLGELERQEEVALSVKIFRLIQKQDWYKPDVFMYKDLIVALAKSKKMDDAMELWESMRKENLFPDSQTYTEVIRGFLRFGSPSDAMNIYEDMKKSPD

Query:  PPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVYDPPEEIFG
        PP+ELPFR+LLKGLLPHPLLRN+VK+DFEELFP++H YDPPEEIFG
Subjt:  PPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVYDPPEEIFG

Arabidopsis top hitse value%identityAlignment
AT1G62350.1 Pentatricopeptide repeat (PPR) superfamily protein6.3e-4744.75Show/hide
Query:  IGKEALFVIQGLRRFKEDEEKLQKFMKNHVSRLLKLDMIAVLGELERQEEVALSVKIFRLIQKQDWYKPDVFMYKDLIVALAKSKKMDDAMELWESMRKE
        + KE L   + L+R +    +L +F+ +HVSRLLK D+++VL E +RQ +V L +K++ +++++ WY+PD+F Y+D+++ LA++KK+D+  ++WE ++KE
Subjt:  IGKEALFVIQGLRRFKEDEEKLQKFMKNHVSRLLKLDMIAVLGELERQEEVALSVKIFRLIQKQDWYKPDVFMYKDLIVALAKSKKMDDAMELWESMRKE

Query:  NLFPDSQTYTEVIRGFLRFGSPSDAMNIYEDMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVYDPPEEI
         +  D  T+ +++RGFL    P +AM +Y +M++SPD P  LPFR++LKGL+P+P LR +VK DF ELFP   VYDPPE+I
Subjt:  NLFPDSQTYTEVIRGFLRFGSPSDAMNIYEDMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVYDPPEEI

AT3G46870.1 Pentatricopeptide repeat (PPR) superfamily protein1.7e-9769.92Show/hide
Query:  KLPILASVLLRALTRRP-IRDIPFPVKSAFAGFQPDSSRPLCGF-RLYHDGRPRGPLWRSRKAIGKEALFVIQGLRRFKEDEEKLQKFMKNHVSRLLKLD
        K P  AS+  + +TR P I  I F          P   +P   F   +HDGRPRGPLWR +K IGKEALFVI GL+R KED+EKL KF+K HV RLLKLD
Subjt:  KLPILASVLLRALTRRP-IRDIPFPVKSAFAGFQPDSSRPLCGF-RLYHDGRPRGPLWRSRKAIGKEALFVIQGLRRFKEDEEKLQKFMKNHVSRLLKLD

Query:  MIAVLGELERQEEVALSVKIFRLIQKQDWYKPDVFMYKDLIVALAKSKKMDDAMELWESMRKENLFPDSQTYTEVIRGFLRFGSPSDAMNIYEDMKKSPD
        M+AV+GELERQEE AL++K+F +IQKQ+WY+PDVFMYKDLIV+LAKSK+MD+AM LWE M+KENLFPDSQTYTEVIRGFLR G P+DAMN+YEDM KSPD
Subjt:  MIAVLGELERQEEVALSVKIFRLIQKQDWYKPDVFMYKDLIVALAKSKKMDDAMELWESMRKENLFPDSQTYTEVIRGFLRFGSPSDAMNIYEDMKKSPD

Query:  PPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVYDPPEEIFG
        PP+ELPFR+LLKGLLPHPLLRN+VK+DFEELFP++H YDPPEEIFG
Subjt:  PPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVYDPPEEIFG

AT5G09320.1 Vacuolar sorting protein 9 (VPS9) domain2.8e-1531.64Show/hide
Query:  RGPLWRSRKAIGKEALFVIQGLRR---------------FKEDEEKLQKFMKNHVSRLLKLDMIAVLGELERQEEVALSVKIFRLIQKQDWYKPDVFMYK
        R PL R R  +  EA+  +Q L+R                      L + + +   RLLK DM+AVL EL RQ E +L++K+F  I+K+ WYKP V MY 
Subjt:  RGPLWRSRKAIGKEALFVIQGLRR---------------FKEDEEKLQKFMKNHVSRLLKLDMIAVLGELERQEEVALSVKIFRLIQKQDWYKPDVFMYK

Query:  DLIVALAKSKKMDDAMELWESMRKE-NLFPDSQTYTEVIRGFLRFGSPSDAMNIYEDMKKSPDPPDELPFRILLKGL
        D+I  +A +  M++   L+ +M+ E  L  + + +  ++   L        M+ Y  M+     PD   FR+L+ GL
Subjt:  DLIVALAKSKKMDDAMELWESMRKE-NLFPDSQTYTEVIRGFLRFGSPSDAMNIYEDMKKSPDPPDELPFRILLKGL

AT5G12100.1 pentatricopeptide (PPR) repeat-containing protein2.1e-1035.29Show/hide
Query:  EVALSVKIFRLIQKQDWYKPDVFMYKDLIVALAKSKKMDDAMELWESMRKENLFPDSQTYTEVIRGFLRFGSPSDAMNIYEDMKKSPDPPDELPFRILLK
        +V   +++F  + K D   P VF+Y  LI  L K K+M+DA +L++ M    L P   TY  +I G+ + G+P  +  + E MK     P  + F  LLK
Subjt:  EVALSVKIFRLIQKQDWYKPDVFMYKDLIVALAKSKKMDDAMELWESMRKENLFPDSQTYTEVIRGFLRFGSPSDAMNIYEDMKKSPDPPDELPFRILLK

Query:  GL
        GL
Subjt:  GL

AT5G48730.1 Pentatricopeptide repeat (PPR) superfamily protein3.6e-1029.11Show/hide
Query:  RSRKAIGKEALFVIQGLRRFKEDEEKLQKFMKNHVSRLLKLDMIAVLGELERQEEVALSVKIFRLIQKQDWYKPDVFMYKDLIVALAKSKKMDDAMELWE
        ++ K   ++A+ +I      K   EK     K    +LL   ++  L E         ++++F L+++Q WYKP+V +Y  LIV L K K+ + A EL++
Subjt:  RSRKAIGKEALFVIQGLRRFKEDEEKLQKFMKNHVSRLLKLDMIAVLGELERQEEVALSVKIFRLIQKQDWYKPDVFMYKDLIVALAKSKKMDDAMELWE

Query:  SMRKENLFPDSQTYTEVIRGFLRFGSPSDAMNIYEDMKKSPD-PPDELPFRILLKGLL
         M  E    + + YT ++  + R G    A  + E MK S +  PD   + IL+K  L
Subjt:  SMRKENLFPDSQTYTEVIRGFLRFGSPSDAMNIYEDMKKSPD-PPDELPFRILLKGLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGATTCAGGGGTTTTCCAGGTCGAAATTACCAATTCTTGCTTCGGTATTACTTCGAGCTCTAACGAGGAGACCCATTAGAGATATCCCATTTCCAGTGAAGTCGGC
GTTTGCTGGATTTCAGCCGGATTCGAGCCGACCCTTATGCGGATTTCGGCTTTATCACGACGGGAGGCCACGAGGACCCCTTTGGAGGAGCCGGAAGGCCATTGGGAAAG
AAGCGCTTTTTGTGATTCAGGGATTGAGGAGATTCAAGGAAGATGAAGAGAAGCTTCAGAAGTTTATGAAGAATCACGTTTCGAGGCTCTTGAAATTGGATATGATTGCT
GTGCTTGGTGAACTTGAGCGGCAGGAAGAGGTTGCTTTATCCGTCAAGATATTTAGGTTGATTCAAAAGCAAGACTGGTACAAGCCTGATGTTTTTATGTACAAGGACTT
GATTGTCGCATTAGCTAAAAGTAAAAAGATGGATGATGCAATGGAATTATGGGAAAGCATGAGAAAGGAGAATTTGTTCCCCGATTCTCAAACGTATACCGAAGTCATCA
GAGGTTTCTTGAGATTTGGATCTCCTTCTGATGCAATGAACATATATGAGGATATGAAGAAGTCTCCAGATCCACCAGATGAGTTGCCATTCAGAATTTTGTTGAAAGGA
CTTTTGCCACACCCCCTTTTGAGAAACAGAGTAAAGCAAGATTTTGAAGAGCTCTTTCCTGACCAGCATGTGTACGATCCCCCCGAAGAGATATTCGGCCTACGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCGATTCAGGGGTTTTCCAGGTCGAAATTACCAATTCTTGCTTCGGTATTACTTCGAGCTCTAACGAGGAGACCCATTAGAGATATCCCATTTCCAGTGAAGTCGGC
GTTTGCTGGATTTCAGCCGGATTCGAGCCGACCCTTATGCGGATTTCGGCTTTATCACGACGGGAGGCCACGAGGACCCCTTTGGAGGAGCCGGAAGGCCATTGGGAAAG
AAGCGCTTTTTGTGATTCAGGGATTGAGGAGATTCAAGGAAGATGAAGAGAAGCTTCAGAAGTTTATGAAGAATCACGTTTCGAGGCTCTTGAAATTGGATATGATTGCT
GTGCTTGGTGAACTTGAGCGGCAGGAAGAGGTTGCTTTATCCGTCAAGATATTTAGGTTGATTCAAAAGCAAGACTGGTACAAGCCTGATGTTTTTATGTACAAGGACTT
GATTGTCGCATTAGCTAAAAGTAAAAAGATGGATGATGCAATGGAATTATGGGAAAGCATGAGAAAGGAGAATTTGTTCCCCGATTCTCAAACGTATACCGAAGTCATCA
GAGGTTTCTTGAGATTTGGATCTCCTTCTGATGCAATGAACATATATGAGGATATGAAGAAGTCTCCAGATCCACCAGATGAGTTGCCATTCAGAATTTTGTTGAAAGGA
CTTTTGCCACACCCCCTTTTGAGAAACAGAGTAAAGCAAGATTTTGAAGAGCTCTTTCCTGACCAGCATGTGTACGATCCCCCCGAAGAGATATTCGGCCTACGTTGA
Protein sequenceShow/hide protein sequence
MPIQGFSRSKLPILASVLLRALTRRPIRDIPFPVKSAFAGFQPDSSRPLCGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLRRFKEDEEKLQKFMKNHVSRLLKLDMIA
VLGELERQEEVALSVKIFRLIQKQDWYKPDVFMYKDLIVALAKSKKMDDAMELWESMRKENLFPDSQTYTEVIRGFLRFGSPSDAMNIYEDMKKSPDPPDELPFRILLKG
LLPHPLLRNRVKQDFEELFPDQHVYDPPEEIFGLR