; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg006002 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg006002
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionF-box protein
Genome locationscaffold7:31441884..31451153
RNA-Seq ExpressionSpg006002
SyntenySpg006002
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR017451 - F-box associated interaction domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039746.1 F-box protein [Cucumis melo var. makuwa]5.2e-4046.67Show/hide
Query:  FCDGIFNPMTGEFFKLCGPEKQEDIYAFRFGFNPKIKQYKLFKVFPNKVDSSRTMEILTIGRGGTNQNHNHWRHV-SLPFALTLYHHGAYLNEVMYWIGR
        F DGIFNPMT EF ++   E   D Y +  GF+P  KQYK+F+V PN  ++S  M ILT  R  TN  +N WR + SLP  +     G YLN  +YW+GR
Subjt:  FCDGIFNPMTGEFFKLCGPEKQEDIYAFRFGFNPKIKQYKLFKVFPNKVDSSRTMEILTIGRGGTNQNHNHWRHV-SLPFALTLYHHGAYLNEVMYWIGR

Query:  Q--KENECVIYGLDVETEKIESIAVLEVGSYSRNA----RIQTSNGTIYAMIFVDPFTPSHKIQVWRMRGKDLWVKDFLIHDVPKDRV-FFLIKAIEDRE
        +  KENE  IY L+VETE+IE  AVL +G +S ++     ++  NG++YA  ++DP T +  IQVWRM+ KDLW+K+F+I D+P +     LIKA ED E
Subjt:  Q--KENECVIYGLDVETEKIESIAVLEVGSYSRNA----RIQTSNGTIYAMIFVDPFTPSHKIQVWRMRGKDLWVKDFLIHDVPKDRV-FFLIKAIEDRE

Query:  ILFLVGDELF
        IL +V  + F
Subjt:  ILFLVGDELF

KAA0039747.1 F-box protein [Cucumis melo var. makuwa]3.0e-4045.79Show/hide
Query:  CDGIFNPMTGEFFKLCGPEKQEDIYAFRFGFNPKIKQYKLFKVFP------NKVDSSRTMEILTI-GRGGTNQNHNHWRHV-SLPFALTLYHHGAYLNEV
        CDGIFNPMT EFF++   E   DIY++  GF+P  KQYKLF+V        +  ++S  M++LT   R  TN NH+ WR + SLP  +   H+GAYLN V
Subjt:  CDGIFNPMTGEFFKLCGPEKQEDIYAFRFGFNPKIKQYKLFKVFP------NKVDSSRTMEILTI-GRGGTNQNHNHWRHV-SLPFALTLYHHGAYLNEV

Query:  MYWIG--RQKENECVIYGLDVETEKIESIAVLEVG--SYSRNARIQTSNGTIYAMIFVDPFTPSHKIQVWRMRGKDLWVKDFLIHDVPKD-RVFFLIKAI
        +YWIG    KENE +IY ++VETE IE   +L++G  S S +A ++  N ++YA  F++P T +  IQVWRM+ KDLW+++F+I D+P +     LIKA 
Subjt:  MYWIG--RQKENECVIYGLDVETEKIESIAVLEVG--SYSRNARIQTSNGTIYAMIFVDPFTPSHKIQVWRMRGKDLWVKDFLIHDVPKD-RVFFLIKAI

Query:  EDREILFLVGDELF
        ED EIL ++  + F
Subjt:  EDREILFLVGDELF

KAE8648955.1 hypothetical protein Csa_007901 [Cucumis sativus]5.2e-4049.53Show/hide
Query:  DNFCDGIFNPMTGEFFKLCGPE--KQEDIYAF-RFGFNPKIKQYKLFKVFPNKVDSSRTMEILTIGRGGTNQNHNHWRHVS-LPFALTLYHHGAYLNEVM
        +NFC+GI NPMT EFF L      K EDI  F  FGFN K KQYKLFK   ++ DS   ME++   R G N+    WRH++ LPF    Y  G YLN V+
Subjt:  DNFCDGIFNPMTGEFFKLCGPE--KQEDIYAF-RFGFNPKIKQYKLFKVFPNKVDSSRTMEILTIGRGGTNQNHNHWRHVS-LPFALTLYHHGAYLNEVM

Query:  YWIGRQKENECVIYGLDVETEKIESIAVLEVG-SYSRN---ARIQTSNGTIYAMIFVDPFTPSHKIQVWRMRGKDLWVKDFLIHDVPK---DRVFFLIKA
        YWIGRQKEN+ VIY L+VETEKIESI VL+V  SY+ +     I   NG +YA I++   T   K+Q+W M+GKD WVK+F++HD+     D    L+K 
Subjt:  YWIGRQKENECVIYGLDVETEKIESIAVLEVG-SYSRN---ARIQTSNGTIYAMIFVDPFTPSHKIQVWRMRGKDLWVKDFLIHDVPK---DRVFFLIKA

Query:  IEDREILFLVGDEL
         ED E  F VG  L
Subjt:  IEDREILFLVGDEL

XP_004141602.1 F-box protein At3g07870 [Cucumis sativus]5.2e-4049.53Show/hide
Query:  DNFCDGIFNPMTGEFFKLCGPE--KQEDIYAF-RFGFNPKIKQYKLFKVFPNKVDSSRTMEILTIGRGGTNQNHNHWRHVS-LPFALTLYHHGAYLNEVM
        +NFC+GI NPMT EFF L      K EDI  F  FGFN K KQYKLFK   ++ DS   ME++   R G N+    WRH++ LPF    Y  G YLN V+
Subjt:  DNFCDGIFNPMTGEFFKLCGPE--KQEDIYAF-RFGFNPKIKQYKLFKVFPNKVDSSRTMEILTIGRGGTNQNHNHWRHVS-LPFALTLYHHGAYLNEVM

Query:  YWIGRQKENECVIYGLDVETEKIESIAVLEVG-SYSRN---ARIQTSNGTIYAMIFVDPFTPSHKIQVWRMRGKDLWVKDFLIHDVPK---DRVFFLIKA
        YWIGRQKEN+ VIY L+VETEKIESI VL+V  SY+ +     I   NG +YA I++   T   K+Q+W M+GKD WVK+F++HD+     D    L+K 
Subjt:  YWIGRQKENECVIYGLDVETEKIESIAVLEVG-SYSRN---ARIQTSNGTIYAMIFVDPFTPSHKIQVWRMRGKDLWVKDFLIHDVPK---DRVFFLIKA

Query:  IEDREILFLVGDEL
         ED E  F VG  L
Subjt:  IEDREILFLVGDEL

XP_038890298.1 F-box protein At3g07870-like [Benincasa hispida]8.0e-4146.23Show/hide
Query:  CDGIFNPMTGEFFKLCGPEKQEDIYAFRFGFNPKIKQYKLFKVFPN-----KVDSSRTMEILTIGRGGTNQNHNHWRHVSLPFALTLYHHGAYLNEVMYW
        CDGIFNPMT EF ++   +   DIY F FGF    KQYKLF+V  +     + +S   M++LT  R GTN NHN WR++     L ++ +GAYLN  +YW
Subjt:  CDGIFNPMTGEFFKLCGPEKQEDIYAFRFGFNPKIKQYKLFKVFPN-----KVDSSRTMEILTIGRGGTNQNHNHWRHVSLPFALTLYHHGAYLNEVMYW

Query:  IGR--QKENECVIYGLDVETEKIESIAVLEVG---SYSRNARIQTSNGTIYAMIFVDPFTPSHKIQVWRMRGKDLWVKDFLIHDVPKD-RVFFLIKAIED
        IG+  +KENE  IY LDVETEKIE   VLE+      S+   +Q  N ++YA+  ++  T  + IQVWRM+ KDLW+++F++ D+P D  V  LIKA ED
Subjt:  IGR--QKENECVIYGLDVETEKIESIAVLEVG---SYSRNARIQTSNGTIYAMIFVDPFTPSHKIQVWRMRGKDLWVKDFLIHDVPKD-RVFFLIKAIED

Query:  REILFLVGDELF
         EIL +V  + F
Subjt:  REILFLVGDELF

TrEMBL top hitse value%identityAlignment
A0A0A0KSJ2 F-box domain-containing protein2.5e-4049.53Show/hide
Query:  DNFCDGIFNPMTGEFFKLCGPE--KQEDIYAF-RFGFNPKIKQYKLFKVFPNKVDSSRTMEILTIGRGGTNQNHNHWRHVS-LPFALTLYHHGAYLNEVM
        +NFC+GI NPMT EFF L      K EDI  F  FGFN K KQYKLFK   ++ DS   ME++   R G N+    WRH++ LPF    Y  G YLN V+
Subjt:  DNFCDGIFNPMTGEFFKLCGPE--KQEDIYAF-RFGFNPKIKQYKLFKVFPNKVDSSRTMEILTIGRGGTNQNHNHWRHVS-LPFALTLYHHGAYLNEVM

Query:  YWIGRQKENECVIYGLDVETEKIESIAVLEVG-SYSRN---ARIQTSNGTIYAMIFVDPFTPSHKIQVWRMRGKDLWVKDFLIHDVPK---DRVFFLIKA
        YWIGRQKEN+ VIY L+VETEKIESI VL+V  SY+ +     I   NG +YA I++   T   K+Q+W M+GKD WVK+F++HD+     D    L+K 
Subjt:  YWIGRQKENECVIYGLDVETEKIESIAVLEVG-SYSRN---ARIQTSNGTIYAMIFVDPFTPSHKIQVWRMRGKDLWVKDFLIHDVPK---DRVFFLIKA

Query:  IEDREILFLVGDEL
         ED E  F VG  L
Subjt:  IEDREILFLVGDEL

A0A1S3CCE7 uncharacterized protein LOC1034990687.3e-4046.86Show/hide
Query:  CDGIFNPMTGEFFKLCGPEKQEDIYAFRFGFNPKIKQYKLFKVFP------NKVDSSRTMEILTI-GRGGTNQNHNHWRHV-SLPFALTLYHHGAYLNEV
        CDGIFNPMT EFF++   E   DIY++  GF+P  KQYKLF+V        +  ++S  M++LT   R  TN NH+ WR + SLP  +   H+GAYLN V
Subjt:  CDGIFNPMTGEFFKLCGPEKQEDIYAFRFGFNPKIKQYKLFKVFP------NKVDSSRTMEILTI-GRGGTNQNHNHWRHV-SLPFALTLYHHGAYLNEV

Query:  MYWIG--RQKENECVIYGLDVETEKIESIAVLEVG--SYSRNARIQTSNGTIYAMIFVDPFTPSHKIQVWRMRGKDLWVKDFLIHDVPKD-RVFFLIKAI
        +YWIG    KENE +IY ++VETE IE   +L++G  S S +A ++  N ++YA  F++P T +  IQVWRM+ KDLW+++F+I D+P +     LIKA 
Subjt:  MYWIG--RQKENECVIYGLDVETEKIESIAVLEVG--SYSRNARIQTSNGTIYAMIFVDPFTPSHKIQVWRMRGKDLWVKDFLIHDVPKD-RVFFLIKAI

Query:  EDREILF
        ED EIL+
Subjt:  EDREILF

A0A5A7T7C6 F-box protein7.3e-4042.67Show/hide
Query:  TYDNFCDGIFNPMTGEFFKLCGPEKQEDIYAFRFGFNPKIKQYKLFKVFPNKVDSSR----TMEILTIGRGGTNQNHNHWRHVS-LPFALTLYHHGAYLN
        T+D+ C+GI NPMT EF ++  PE + D+++  FGF+P+ KQYKLF+  P  +++ +     MEI T   G     +  WRH   LPF   ++HHG YLN
Subjt:  TYDNFCDGIFNPMTGEFFKLCGPEKQEDIYAFRFGFNPKIKQYKLFKVFPNKVDSSR----TMEILTIGRGGTNQNHNHWRHVS-LPFALTLYHHGAYLN

Query:  EVMYWIGR--QKENECVIYGLDVETEKIESIAVLEVGSYSRNARIQTSNGTIYAMIF-----VDPFTPSHKIQVWRMRGKDLWVKDFLIHDVPKDRVFFL
         V+YWIG+  +KE E VIY LDV+TE++E IA LE+G + +N  I+     +YA+I      V P   S+KI++WRM+ KD W+K+F I     +  F L
Subjt:  EVMYWIGR--QKENECVIYGLDVETEKIESIAVLEVGSYSRNARIQTSNGTIYAMIF-----VDPFTPSHKIQVWRMRGKDLWVKDFLIHDVPKDRVFFL

Query:  IKAIEDREILFLVGDELFR------KINIKTL
        I   ED E+L  + D +FR      KI IKTL
Subjt:  IKAIEDREILFLVGDELFR------KINIKTL

A0A5A7TCF3 F-box protein2.5e-4046.67Show/hide
Query:  FCDGIFNPMTGEFFKLCGPEKQEDIYAFRFGFNPKIKQYKLFKVFPNKVDSSRTMEILTIGRGGTNQNHNHWRHV-SLPFALTLYHHGAYLNEVMYWIGR
        F DGIFNPMT EF ++   E   D Y +  GF+P  KQYK+F+V PN  ++S  M ILT  R  TN  +N WR + SLP  +     G YLN  +YW+GR
Subjt:  FCDGIFNPMTGEFFKLCGPEKQEDIYAFRFGFNPKIKQYKLFKVFPNKVDSSRTMEILTIGRGGTNQNHNHWRHV-SLPFALTLYHHGAYLNEVMYWIGR

Query:  Q--KENECVIYGLDVETEKIESIAVLEVGSYSRNA----RIQTSNGTIYAMIFVDPFTPSHKIQVWRMRGKDLWVKDFLIHDVPKDRV-FFLIKAIEDRE
        +  KENE  IY L+VETE+IE  AVL +G +S ++     ++  NG++YA  ++DP T +  IQVWRM+ KDLW+K+F+I D+P +     LIKA ED E
Subjt:  Q--KENECVIYGLDVETEKIESIAVLEVGSYSRNA----RIQTSNGTIYAMIFVDPFTPSHKIQVWRMRGKDLWVKDFLIHDVPKDRV-FFLIKAIEDRE

Query:  ILFLVGDELF
        IL +V  + F
Subjt:  ILFLVGDELF

A0A5A7TE00 F-box protein1.5e-4045.79Show/hide
Query:  CDGIFNPMTGEFFKLCGPEKQEDIYAFRFGFNPKIKQYKLFKVFP------NKVDSSRTMEILTI-GRGGTNQNHNHWRHV-SLPFALTLYHHGAYLNEV
        CDGIFNPMT EFF++   E   DIY++  GF+P  KQYKLF+V        +  ++S  M++LT   R  TN NH+ WR + SLP  +   H+GAYLN V
Subjt:  CDGIFNPMTGEFFKLCGPEKQEDIYAFRFGFNPKIKQYKLFKVFP------NKVDSSRTMEILTI-GRGGTNQNHNHWRHV-SLPFALTLYHHGAYLNEV

Query:  MYWIG--RQKENECVIYGLDVETEKIESIAVLEVG--SYSRNARIQTSNGTIYAMIFVDPFTPSHKIQVWRMRGKDLWVKDFLIHDVPKD-RVFFLIKAI
        +YWIG    KENE +IY ++VETE IE   +L++G  S S +A ++  N ++YA  F++P T +  IQVWRM+ KDLW+++F+I D+P +     LIKA 
Subjt:  MYWIG--RQKENECVIYGLDVETEKIESIAVLEVG--SYSRNARIQTSNGTIYAMIFVDPFTPSHKIQVWRMRGKDLWVKDFLIHDVPKD-RVFFLIKAI

Query:  EDREILFLVGDELF
        ED EIL ++  + F
Subjt:  EDREILFLVGDELF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGAGCGGGGGTATCCTATGCAATGAGTTTGCATAAGACCGGACCACGAAATAGTAAACCACTAGATGACTTGAACAAAGGGATCCCGCCCTCTCACTGGCCCGAGAG
GGACTTTCTGTTTAATGGTTGGACCATAAACAGGTTGTTCATTAGAGGAGCGCTGTCCCACAACTACGTTCCTAATCTCAGAGTTATAGCGGAGAAGATCAAATGGTGGT
GTTCTTCGTTGTTGCAGAGCAATCAAAAATCATCCGTTGAAGTATTCAGAGTCGTCAACGAAGTTCAGAAACAATTGGGAAGTCTAGGAGAGAGAGTTGATGGCTATCGT
GAATCCCCAGTTGTCAGACGGTCGAATGAATTGAAGAAGTCGCTTAGGCGAGTTGAGGCATCAAAGTGGAAGGCCAGAGCAGTTGCTAAGGTCAAAGGTCAGGTCTCTAG
CTTGGTAACAGGTTTGAACAGAGGATTCAAGCCATTCTCAGAGTGTATCTTCTTCAGGAACAGTTGTTCGGGTTGGAAGAAGATAATAGGTATTTTTGAGCCTTGGAGTT
TACCAAGAAGATCAGAGATAACAGTTGTAGTGGGAGTAGATCCTTGGAATACCTATGACAATTTCTGTGATGGCATATTTAATCCAATGACTGGAGAATTCTTTAAACTT
TGTGGACCTGAAAAACAAGAAGATATTTATGCCTTCAGATTTGGTTTCAACCCTAAAATCAAGCAGTACAAATTGTTCAAAGTTTTCCCTAACAAAGTAGATTCCAGTCG
TACAATGGAGATTTTAACGATTGGTAGAGGTGGAACCAATCAAAATCATAACCATTGGAGGCATGTTTCCCTGCCTTTTGCCCTAACACTTTACCATCATGGTGCTTACT
TGAATGAAGTGATGTATTGGATCGGAAGACAAAAAGAAAATGAGTGTGTCATATATGGTCTTGATGTTGAAACTGAGAAGATTGAATCCATTGCGGTCTTGGAAGTTGGC
TCTTACTCCAGGAATGCGAGGATTCAAACATCTAATGGCACCATTTATGCAATGATTTTCGTGGACCCATTCACACCATCTCATAAGATTCAAGTGTGGAGGATGCGAGG
GAAAGATTTATGGGTCAAAGACTTTCTTATTCATGACGTACCAAAGGATAGAGTATTTTTCCTCATTAAAGCCATTGAAGATAGAGAAATATTGTTTTTGGTCGGAGATG
AGTTATTTAGGAAGATCAATATCAAAACATTGATTCTACATGGCAGACGAGTTGTAGCGGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCGAGCGGGGGTATCCTATGCAATGAGTTTGCATAAGACCGGACCACGAAATAGTAAACCACTAGATGACTTGAACAAAGGGATCCCGCCCTCTCACTGGCCCGAGAG
GGACTTTCTGTTTAATGGTTGGACCATAAACAGGTTGTTCATTAGAGGAGCGCTGTCCCACAACTACGTTCCTAATCTCAGAGTTATAGCGGAGAAGATCAAATGGTGGT
GTTCTTCGTTGTTGCAGAGCAATCAAAAATCATCCGTTGAAGTATTCAGAGTCGTCAACGAAGTTCAGAAACAATTGGGAAGTCTAGGAGAGAGAGTTGATGGCTATCGT
GAATCCCCAGTTGTCAGACGGTCGAATGAATTGAAGAAGTCGCTTAGGCGAGTTGAGGCATCAAAGTGGAAGGCCAGAGCAGTTGCTAAGGTCAAAGGTCAGGTCTCTAG
CTTGGTAACAGGTTTGAACAGAGGATTCAAGCCATTCTCAGAGTGTATCTTCTTCAGGAACAGTTGTTCGGGTTGGAAGAAGATAATAGGTATTTTTGAGCCTTGGAGTT
TACCAAGAAGATCAGAGATAACAGTTGTAGTGGGAGTAGATCCTTGGAATACCTATGACAATTTCTGTGATGGCATATTTAATCCAATGACTGGAGAATTCTTTAAACTT
TGTGGACCTGAAAAACAAGAAGATATTTATGCCTTCAGATTTGGTTTCAACCCTAAAATCAAGCAGTACAAATTGTTCAAAGTTTTCCCTAACAAAGTAGATTCCAGTCG
TACAATGGAGATTTTAACGATTGGTAGAGGTGGAACCAATCAAAATCATAACCATTGGAGGCATGTTTCCCTGCCTTTTGCCCTAACACTTTACCATCATGGTGCTTACT
TGAATGAAGTGATGTATTGGATCGGAAGACAAAAAGAAAATGAGTGTGTCATATATGGTCTTGATGTTGAAACTGAGAAGATTGAATCCATTGCGGTCTTGGAAGTTGGC
TCTTACTCCAGGAATGCGAGGATTCAAACATCTAATGGCACCATTTATGCAATGATTTTCGTGGACCCATTCACACCATCTCATAAGATTCAAGTGTGGAGGATGCGAGG
GAAAGATTTATGGGTCAAAGACTTTCTTATTCATGACGTACCAAAGGATAGAGTATTTTTCCTCATTAAAGCCATTGAAGATAGAGAAATATTGTTTTTGGTCGGAGATG
AGTTATTTAGGAAGATCAATATCAAAACATTGATTCTACATGGCAGACGAGTTGTAGCGGCTTAA
Protein sequenceShow/hide protein sequence
MRAGVSYAMSLHKTGPRNSKPLDDLNKGIPPSHWPERDFLFNGWTINRLFIRGALSHNYVPNLRVIAEKIKWWCSSLLQSNQKSSVEVFRVVNEVQKQLGSLGERVDGYR
ESPVVRRSNELKKSLRRVEASKWKARAVAKVKGQVSSLVTGLNRGFKPFSECIFFRNSCSGWKKIIGIFEPWSLPRRSEITVVVGVDPWNTYDNFCDGIFNPMTGEFFKL
CGPEKQEDIYAFRFGFNPKIKQYKLFKVFPNKVDSSRTMEILTIGRGGTNQNHNHWRHVSLPFALTLYHHGAYLNEVMYWIGRQKENECVIYGLDVETEKIESIAVLEVG
SYSRNARIQTSNGTIYAMIFVDPFTPSHKIQVWRMRGKDLWVKDFLIHDVPKDRVFFLIKAIEDREILFLVGDELFRKINIKTLILHGRRVVAA