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Spg006013 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg006013
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCyclin-dependent kinase C-2-like
Genome locationscaffold7:31314808..31316668
RNA-Seq ExpressionSpg006013
SyntenySpg006013
Gene Ontology termsGO:0032968 - positive regulation of transcription elongation from RNA polymerase II promoter (biological process)
GO:0051726 - regulation of cell cycle (biological process)
GO:0070816 - phosphorylation of RNA polymerase II C-terminal domain (biological process)
GO:0000307 - cyclin-dependent protein kinase holoenzyme complex (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0004693 - cyclin-dependent protein serine/threonine kinase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0008353 - RNA polymerase II CTD heptapeptide repeat kinase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053658.1 cyclin-dependent kinase C-2-like [Cucumis melo var. makuwa]2.3e-1885.96Show/hide
Query:  SRVLKERRIRVQGKTMAMTAPGQLNVNESPSWGSRSVDCFEKLEQIGEGTYGYAICA
        +RVL+ RRIRVQGKTMA+TAPGQLNVNESPSWGSRSVDCFEKLEQIGEGTYG    A
Subjt:  SRVLKERRIRVQGKTMAMTAPGQLNVNESPSWGSRSVDCFEKLEQIGEGTYGYAICA

KAG6570322.1 Cyclin-dependent kinase C-1, partial [Cucurbita argyrosperma subsp. sororia]1.1e-2067.82Show/hide
Query:  SSRREEKSENKEESQRSQATPFTRNHHSQFSRVLKERRIRVQGKTMAMTAPGQLNVNESPSWGSRSVDCFEKLEQIGEGTYGYAICA
        +SRR  ++  +  +  S A PFT N +SQF RV +ERR+RVQGKTMA+TAPGQLNVNE PSWGSRSVDCFEKLEQIGEGTYG    A
Subjt:  SSRREEKSENKEESQRSQATPFTRNHHSQFSRVLKERRIRVQGKTMAMTAPGQLNVNESPSWGSRSVDCFEKLEQIGEGTYGYAICA

KAG6602268.1 Glucomannan 4-beta-mannosyltransferase 9, partial [Cucurbita argyrosperma subsp. sororia]2.8e-2178.87Show/hide
Query:  SQATPFTRNHHSQFSRVLKERRIRVQGKTMAMTAPGQLNVNESPSWGSRSVDCFEKLEQIGEGTYGYAICA
        S ATP TRN +SQFS V +ERR+RVQGK MA+TAPGQLNVNESPSWGSR VDCFEKLEQIGEGTYG    A
Subjt:  SQATPFTRNHHSQFSRVLKERRIRVQGKTMAMTAPGQLNVNESPSWGSRSVDCFEKLEQIGEGTYGYAICA

XP_008443529.1 PREDICTED: cyclin-dependent kinase C-2-like [Cucumis melo]7.0e-1288.1Show/hide
Query:  MAMTAPGQLNVNESPSWGSRSVDCFEKLEQIGEGTYGYAICA
        MA+TAPGQLNVNESPSWGSRSVDCFEKLEQIGEGTYG    A
Subjt:  MAMTAPGQLNVNESPSWGSRSVDCFEKLEQIGEGTYGYAICA

XP_011652872.2 cyclin-dependent kinase C-2 [Cucumis sativus]7.0e-1288.1Show/hide
Query:  MAMTAPGQLNVNESPSWGSRSVDCFEKLEQIGEGTYGYAICA
        MA+TAPGQLNVNESPSWGSRSVDCFEKLEQIGEGTYG    A
Subjt:  MAMTAPGQLNVNESPSWGSRSVDCFEKLEQIGEGTYGYAICA

TrEMBL top hitse value%identityAlignment
A0A0A0KWT1 Protein kinase domain-containing protein2.1e-1783.64Show/hide
Query:  VLKERRIRVQGKTMAMTAPGQLNVNESPSWGSRSVDCFEKLEQIGEGTYGYAICA
        V +E R+RVQGKTMA+TAPGQLNVNESPSWGSRSVDCFEKLEQIGEGTYG    A
Subjt:  VLKERRIRVQGKTMAMTAPGQLNVNESPSWGSRSVDCFEKLEQIGEGTYGYAICA

A0A0A0LHZ9 Protein kinase domain-containing protein3.4e-1288.1Show/hide
Query:  MAMTAPGQLNVNESPSWGSRSVDCFEKLEQIGEGTYGYAICA
        MA+TAPGQLNVNESPSWGSRSVDCFEKLEQIGEGTYG    A
Subjt:  MAMTAPGQLNVNESPSWGSRSVDCFEKLEQIGEGTYGYAICA

A0A1S3B891 cyclin-dependent kinase C-2-like3.4e-1288.1Show/hide
Query:  MAMTAPGQLNVNESPSWGSRSVDCFEKLEQIGEGTYGYAICA
        MA+TAPGQLNVNESPSWGSRSVDCFEKLEQIGEGTYG    A
Subjt:  MAMTAPGQLNVNESPSWGSRSVDCFEKLEQIGEGTYGYAICA

A0A5A7TAU5 Cyclin-dependent kinase C-2-like4.4e-1288.1Show/hide
Query:  MAMTAPGQLNVNESPSWGSRSVDCFEKLEQIGEGTYGYAICA
        MA+TAPGQLNVNESPSWGSRSVDCFEKLEQIGEGTYG    A
Subjt:  MAMTAPGQLNVNESPSWGSRSVDCFEKLEQIGEGTYGYAICA

A0A5D3BRW4 Cyclin-dependent kinase C-2-like1.1e-1885.96Show/hide
Query:  SRVLKERRIRVQGKTMAMTAPGQLNVNESPSWGSRSVDCFEKLEQIGEGTYGYAICA
        +RVL+ RRIRVQGKTMA+TAPGQLNVNESPSWGSRSVDCFEKLEQIGEGTYG    A
Subjt:  SRVLKERRIRVQGKTMAMTAPGQLNVNESPSWGSRSVDCFEKLEQIGEGTYGYAICA

SwissProt top hitse value%identityAlignment
Q5JK68 Cyclin-dependent kinase C-23.9e-1380.95Show/hide
Query:  MAMTAPGQLNVNESPSWGSRSVDCFEKLEQIGEGTYGYAICA
        MA+ APGQLN++ESPSWGSRSVDCFEKLEQIGEGTYG    A
Subjt:  MAMTAPGQLNVNESPSWGSRSVDCFEKLEQIGEGTYGYAICA

Q6I5Y0 Cyclin-dependent kinase C-13.9e-1380.95Show/hide
Query:  MAMTAPGQLNVNESPSWGSRSVDCFEKLEQIGEGTYGYAICA
        MA+ APGQLN++ESPSWGSRSVDCFEKLEQIGEGTYG    A
Subjt:  MAMTAPGQLNVNESPSWGSRSVDCFEKLEQIGEGTYGYAICA

Q8W4P1 Cyclin-dependent kinase C-25.8e-0972.09Show/hide
Query:  MAMTAPGQLNVNESPS-WGSRSVDCFEKLEQIGEGTYGYAICA
        MA  A GQLN+ E P  WGSRSVDCFEKLEQIGEGTYG    A
Subjt:  MAMTAPGQLNVNESPS-WGSRSVDCFEKLEQIGEGTYGYAICA

Q9LFT8 Cyclin-dependent kinase C-12.6e-0972.09Show/hide
Query:  MAMTAPGQLNVNESPS-WGSRSVDCFEKLEQIGEGTYGYAICA
        MAM + GQLN+ E P  WGSRSVDCFEKLEQIGEGTYG    A
Subjt:  MAMTAPGQLNVNESPS-WGSRSVDCFEKLEQIGEGTYGYAICA

Arabidopsis top hitse value%identityAlignment
AT5G10270.1 cyclin-dependent kinase C;11.8e-1072.09Show/hide
Query:  MAMTAPGQLNVNESPS-WGSRSVDCFEKLEQIGEGTYGYAICA
        MAM + GQLN+ E P  WGSRSVDCFEKLEQIGEGTYG    A
Subjt:  MAMTAPGQLNVNESPS-WGSRSVDCFEKLEQIGEGTYGYAICA

AT5G64960.1 cyclin dependent kinase group C24.1e-1072.09Show/hide
Query:  MAMTAPGQLNVNESPS-WGSRSVDCFEKLEQIGEGTYGYAICA
        MA  A GQLN+ E P  WGSRSVDCFEKLEQIGEGTYG    A
Subjt:  MAMTAPGQLNVNESPS-WGSRSVDCFEKLEQIGEGTYGYAICA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTAGTTTCTCGGCCAACCGAGAAAGGCTTCGAGTTCTGCCATATTTCCCGGTTGACCGAGAAATTACAGAGGATGAATCCCGATTTGCAAGGAAAAATGTAAACGA
TCGTGATGAATGGAGCAGTCGTCGTGAGGAGAAGAGTGAGAATAAGGAAGAAAGCCAACGCTCTCAAGCTACTCCCTTCACTCGTAACCATCATTCCCAATTCAGTAGGG
TCTTAAAGGAAAGGAGAATACGCGTGCAAGGGAAGACTATGGCTATGACAGCCCCTGGGCAGCTCAACGTTAACGAGTCCCCTTCGTGGGGATCGAGAAGTGTTGACTGC
TTCGAAAAATTGGAGCAGATTGGGGAAGGCACTTATGGGTATGCTATTTGCGCCTATACTTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTGTAGTTTCTCGGCCAACCGAGAAAGGCTTCGAGTTCTGCCATATTTCCCGGTTGACCGAGAAATTACAGAGGATGAATCCCGATTTGCAAGGAAAAATGTAAACGA
TCGTGATGAATGGAGCAGTCGTCGTGAGGAGAAGAGTGAGAATAAGGAAGAAAGCCAACGCTCTCAAGCTACTCCCTTCACTCGTAACCATCATTCCCAATTCAGTAGGG
TCTTAAAGGAAAGGAGAATACGCGTGCAAGGGAAGACTATGGCTATGACAGCCCCTGGGCAGCTCAACGTTAACGAGTCCCCTTCGTGGGGATCGAGAAGTGTTGACTGC
TTCGAAAAATTGGAGCAGATTGGGGAAGGCACTTATGGGTATGCTATTTGCGCCTATACTTTTTAG
Protein sequenceShow/hide protein sequence
MCSFSANRERLRVLPYFPVDREITEDESRFARKNVNDRDEWSSRREEKSENKEESQRSQATPFTRNHHSQFSRVLKERRIRVQGKTMAMTAPGQLNVNESPSWGSRSVDC
FEKLEQIGEGTYGYAICAYTF