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Spg006022 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg006022
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionF-box protein
Genome locationscaffold7:31166515..31170018
RNA-Seq ExpressionSpg006022
SyntenySpg006022
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR017451 - F-box associated interaction domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039382.1 F-box protein [Cucumis melo var. makuwa]1.7e-4143.53Show/hide
Query:  TYDNLCDGIFNPMTGEFFKLCGPEKQEDIYAFRFGFNPKIKQYKLFKVFPNKVDSSR----TMEILTIGRGGTNQNHNQWRHVS-LPFALTLYHHGAYLN
        T+D+LC+GI NPMT EF ++  PE + D+++  FGF+P+ KQYKLF+  P  +++ +     MEI T   G     + QWRH   LPF   ++HHG YLN
Subjt:  TYDNLCDGIFNPMTGEFFKLCGPEKQEDIYAFRFGFNPKIKQYKLFKVFPNKVDSSR----TMEILTIGRGGTNQNHNQWRHVS-LPFALTLYHHGAYLN

Query:  EVMYWIGR--QKENECVIYGLDVETEKIESIAVLEVGSYSRNARIQTSNGTIYAMIF-----VDPFTPSHKIQVWRMRGKDLWVKDFLIHDVPKDRVFCL
         V+YWIG+  +KE E VIY LDV+TE++E IA LE+G + +N  I+     +YA+I      V P   S+KI++WRM+ KD W+K+F I     +  F L
Subjt:  EVMYWIGR--QKENECVIYGLDVETEKIESIAVLEVGSYSRNARIQTSNGTIYAMIF-----VDPFTPSHKIQVWRMRGKDLWVKDFLIHDVPKDRVFCL

Query:  IKAIEDREILFLVGDELFR------KINIKTL
        I   ED E+L  + D +FR      KI IKTL
Subjt:  IKAIEDREILFLVGDELFR------KINIKTL

KAA0039747.1 F-box protein [Cucumis melo var. makuwa]1.3e-4146.26Show/hide
Query:  CDGIFNPMTGEFFKLCGPEKQEDIYAFRFGFNPKIKQYKLFKVFP------NKVDSSRTMEILTI-GRGGTNQNHNQWRHV-SLPFALTLYHHGAYLNEV
        CDGIFNPMT EFF++   E   DIY++  GF+P  KQYKLF+V        +  ++S  M++LT   R  TN NH+QWR + SLP  +   H+GAYLN V
Subjt:  CDGIFNPMTGEFFKLCGPEKQEDIYAFRFGFNPKIKQYKLFKVFP------NKVDSSRTMEILTI-GRGGTNQNHNQWRHV-SLPFALTLYHHGAYLNEV

Query:  MYWIG--RQKENECVIYGLDVETEKIESIAVLEVG--SYSRNARIQTSNGTIYAMIFVDPFTPSHKIQVWRMRGKDLWVKDFLIHDVPKD-RVFCLIKAI
        +YWIG    KENE +IY ++VETE IE   +L++G  S S +A ++  N ++YA  F++P T +  IQVWRM+ KDLW+++F+I D+P +     LIKA 
Subjt:  MYWIG--RQKENECVIYGLDVETEKIESIAVLEVG--SYSRNARIQTSNGTIYAMIFVDPFTPSHKIQVWRMRGKDLWVKDFLIHDVPKD-RVFCLIKAI

Query:  EDREILFLVGDELF
        ED EIL ++  + F
Subjt:  EDREILFLVGDELF

TYK24751.1 F-box protein [Cucumis melo var. makuwa]1.1e-4047.12Show/hide
Query:  DGIFNPMTGEFFKLCGPEKQEDIYAFRFGFNPKIKQYKLFKVFPNKVDSSRTMEILTIGRGGTNQNHNQWRHV-SLPFALTLYHHGAYLNEVMYWIGRQ-
        DGIFNPMT EF ++   E   D Y +  GF+P  KQYK+F+V PN  ++S  M ILT  R  TN  +NQWR + SLP  +     G YLN  +YW+GR+ 
Subjt:  DGIFNPMTGEFFKLCGPEKQEDIYAFRFGFNPKIKQYKLFKVFPNKVDSSRTMEILTIGRGGTNQNHNQWRHV-SLPFALTLYHHGAYLNEVMYWIGRQ-

Query:  -KENECVIYGLDVETEKIESIAVLEVGSYSRNA----RIQTSNGTIYAMIFVDPFTPSHKIQVWRMRGKDLWVKDFLIHDVPKDRV-FCLIKAIEDREIL
         KENE  IY L+VETE+IE  AVL +G +S ++     ++  NG++YA  ++DP T +  IQVWRM+ KDLW+K+F+I D+P +     LIKA ED EIL
Subjt:  -KENECVIYGLDVETEKIESIAVLEVGSYSRNA----RIQTSNGTIYAMIFVDPFTPSHKIQVWRMRGKDLWVKDFLIHDVPKDRV-FCLIKAIEDREIL

Query:  FLVGDELF
         +V  + F
Subjt:  FLVGDELF

XP_008460183.1 PREDICTED: uncharacterized protein LOC103499068 [Cucumis melo]6.4e-4147.34Show/hide
Query:  CDGIFNPMTGEFFKLCGPEKQEDIYAFRFGFNPKIKQYKLFKVFP------NKVDSSRTMEILTI-GRGGTNQNHNQWRHV-SLPFALTLYHHGAYLNEV
        CDGIFNPMT EFF++   E   DIY++  GF+P  KQYKLF+V        +  ++S  M++LT   R  TN NH+QWR + SLP  +   H+GAYLN V
Subjt:  CDGIFNPMTGEFFKLCGPEKQEDIYAFRFGFNPKIKQYKLFKVFP------NKVDSSRTMEILTI-GRGGTNQNHNQWRHV-SLPFALTLYHHGAYLNEV

Query:  MYWIG--RQKENECVIYGLDVETEKIESIAVLEVG--SYSRNARIQTSNGTIYAMIFVDPFTPSHKIQVWRMRGKDLWVKDFLIHDVPKD-RVFCLIKAI
        +YWIG    KENE +IY ++VETE IE   +L++G  S S +A ++  N ++YA  F++P T +  IQVWRM+ KDLW+++F+I D+P +     LIKA 
Subjt:  MYWIG--RQKENECVIYGLDVETEKIESIAVLEVG--SYSRNARIQTSNGTIYAMIFVDPFTPSHKIQVWRMRGKDLWVKDFLIHDVPKD-RVFCLIKAI

Query:  EDREILF
        ED EIL+
Subjt:  EDREILF

XP_038890298.1 F-box protein At3g07870-like [Benincasa hispida]3.4e-4246.7Show/hide
Query:  CDGIFNPMTGEFFKLCGPEKQEDIYAFRFGFNPKIKQYKLFKVFPN-----KVDSSRTMEILTIGRGGTNQNHNQWRHVSLPFALTLYHHGAYLNEVMYW
        CDGIFNPMT EF ++   +   DIY F FGF    KQYKLF+V  +     + +S   M++LT  R GTN NHNQWR++     L ++ +GAYLN  +YW
Subjt:  CDGIFNPMTGEFFKLCGPEKQEDIYAFRFGFNPKIKQYKLFKVFPN-----KVDSSRTMEILTIGRGGTNQNHNQWRHVSLPFALTLYHHGAYLNEVMYW

Query:  IGR--QKENECVIYGLDVETEKIESIAVLEVG---SYSRNARIQTSNGTIYAMIFVDPFTPSHKIQVWRMRGKDLWVKDFLIHDVPKD-RVFCLIKAIED
        IG+  +KENE  IY LDVETEKIE   VLE+      S+   +Q  N ++YA+  ++  T  + IQVWRM+ KDLW+++F++ D+P D  V  LIKA ED
Subjt:  IGR--QKENECVIYGLDVETEKIESIAVLEVG---SYSRNARIQTSNGTIYAMIFVDPFTPSHKIQVWRMRGKDLWVKDFLIHDVPKD-RVFCLIKAIED

Query:  REILFLVGDELF
         EIL +V  + F
Subjt:  REILFLVGDELF

TrEMBL top hitse value%identityAlignment
A0A1S3CCE7 uncharacterized protein LOC1034990683.1e-4147.34Show/hide
Query:  CDGIFNPMTGEFFKLCGPEKQEDIYAFRFGFNPKIKQYKLFKVFP------NKVDSSRTMEILTI-GRGGTNQNHNQWRHV-SLPFALTLYHHGAYLNEV
        CDGIFNPMT EFF++   E   DIY++  GF+P  KQYKLF+V        +  ++S  M++LT   R  TN NH+QWR + SLP  +   H+GAYLN V
Subjt:  CDGIFNPMTGEFFKLCGPEKQEDIYAFRFGFNPKIKQYKLFKVFP------NKVDSSRTMEILTI-GRGGTNQNHNQWRHV-SLPFALTLYHHGAYLNEV

Query:  MYWIG--RQKENECVIYGLDVETEKIESIAVLEVG--SYSRNARIQTSNGTIYAMIFVDPFTPSHKIQVWRMRGKDLWVKDFLIHDVPKD-RVFCLIKAI
        +YWIG    KENE +IY ++VETE IE   +L++G  S S +A ++  N ++YA  F++P T +  IQVWRM+ KDLW+++F+I D+P +     LIKA 
Subjt:  MYWIG--RQKENECVIYGLDVETEKIESIAVLEVG--SYSRNARIQTSNGTIYAMIFVDPFTPSHKIQVWRMRGKDLWVKDFLIHDVPKD-RVFCLIKAI

Query:  EDREILF
        ED EIL+
Subjt:  EDREILF

A0A5A7T7C6 F-box protein8.1e-4243.53Show/hide
Query:  TYDNLCDGIFNPMTGEFFKLCGPEKQEDIYAFRFGFNPKIKQYKLFKVFPNKVDSSR----TMEILTIGRGGTNQNHNQWRHVS-LPFALTLYHHGAYLN
        T+D+LC+GI NPMT EF ++  PE + D+++  FGF+P+ KQYKLF+  P  +++ +     MEI T   G     + QWRH   LPF   ++HHG YLN
Subjt:  TYDNLCDGIFNPMTGEFFKLCGPEKQEDIYAFRFGFNPKIKQYKLFKVFPNKVDSSR----TMEILTIGRGGTNQNHNQWRHVS-LPFALTLYHHGAYLN

Query:  EVMYWIGR--QKENECVIYGLDVETEKIESIAVLEVGSYSRNARIQTSNGTIYAMIF-----VDPFTPSHKIQVWRMRGKDLWVKDFLIHDVPKDRVFCL
         V+YWIG+  +KE E VIY LDV+TE++E IA LE+G + +N  I+     +YA+I      V P   S+KI++WRM+ KD W+K+F I     +  F L
Subjt:  EVMYWIGR--QKENECVIYGLDVETEKIESIAVLEVGSYSRNARIQTSNGTIYAMIF-----VDPFTPSHKIQVWRMRGKDLWVKDFLIHDVPKDRVFCL

Query:  IKAIEDREILFLVGDELFR------KINIKTL
        I   ED E+L  + D +FR      KI IKTL
Subjt:  IKAIEDREILFLVGDELFR------KINIKTL

A0A5A7TCF3 F-box protein5.3e-4147.12Show/hide
Query:  DGIFNPMTGEFFKLCGPEKQEDIYAFRFGFNPKIKQYKLFKVFPNKVDSSRTMEILTIGRGGTNQNHNQWRHV-SLPFALTLYHHGAYLNEVMYWIGRQ-
        DGIFNPMT EF ++   E   D Y +  GF+P  KQYK+F+V PN  ++S  M ILT  R  TN  +NQWR + SLP  +     G YLN  +YW+GR+ 
Subjt:  DGIFNPMTGEFFKLCGPEKQEDIYAFRFGFNPKIKQYKLFKVFPNKVDSSRTMEILTIGRGGTNQNHNQWRHV-SLPFALTLYHHGAYLNEVMYWIGRQ-

Query:  -KENECVIYGLDVETEKIESIAVLEVGSYSRNA----RIQTSNGTIYAMIFVDPFTPSHKIQVWRMRGKDLWVKDFLIHDVPKDRV-FCLIKAIEDREIL
         KENE  IY L+VETE+IE  AVL +G +S ++     ++  NG++YA  ++DP T +  IQVWRM+ KDLW+K+F+I D+P +     LIKA ED EIL
Subjt:  -KENECVIYGLDVETEKIESIAVLEVGSYSRNA----RIQTSNGTIYAMIFVDPFTPSHKIQVWRMRGKDLWVKDFLIHDVPKDRV-FCLIKAIEDREIL

Query:  FLVGDELF
         +V  + F
Subjt:  FLVGDELF

A0A5A7TE00 F-box protein6.2e-4246.26Show/hide
Query:  CDGIFNPMTGEFFKLCGPEKQEDIYAFRFGFNPKIKQYKLFKVFP------NKVDSSRTMEILTI-GRGGTNQNHNQWRHV-SLPFALTLYHHGAYLNEV
        CDGIFNPMT EFF++   E   DIY++  GF+P  KQYKLF+V        +  ++S  M++LT   R  TN NH+QWR + SLP  +   H+GAYLN V
Subjt:  CDGIFNPMTGEFFKLCGPEKQEDIYAFRFGFNPKIKQYKLFKVFP------NKVDSSRTMEILTI-GRGGTNQNHNQWRHV-SLPFALTLYHHGAYLNEV

Query:  MYWIG--RQKENECVIYGLDVETEKIESIAVLEVG--SYSRNARIQTSNGTIYAMIFVDPFTPSHKIQVWRMRGKDLWVKDFLIHDVPKD-RVFCLIKAI
        +YWIG    KENE +IY ++VETE IE   +L++G  S S +A ++  N ++YA  F++P T +  IQVWRM+ KDLW+++F+I D+P +     LIKA 
Subjt:  MYWIG--RQKENECVIYGLDVETEKIESIAVLEVG--SYSRNARIQTSNGTIYAMIFVDPFTPSHKIQVWRMRGKDLWVKDFLIHDVPKD-RVFCLIKAI

Query:  EDREILFLVGDELF
        ED EIL ++  + F
Subjt:  EDREILFLVGDELF

A0A5D3DMB7 F-box protein5.3e-4147.12Show/hide
Query:  DGIFNPMTGEFFKLCGPEKQEDIYAFRFGFNPKIKQYKLFKVFPNKVDSSRTMEILTIGRGGTNQNHNQWRHV-SLPFALTLYHHGAYLNEVMYWIGRQ-
        DGIFNPMT EF ++   E   D Y +  GF+P  KQYK+F+V PN  ++S  M ILT  R  TN  +NQWR + SLP  +     G YLN  +YW+GR+ 
Subjt:  DGIFNPMTGEFFKLCGPEKQEDIYAFRFGFNPKIKQYKLFKVFPNKVDSSRTMEILTIGRGGTNQNHNQWRHV-SLPFALTLYHHGAYLNEVMYWIGRQ-

Query:  -KENECVIYGLDVETEKIESIAVLEVGSYSRNA----RIQTSNGTIYAMIFVDPFTPSHKIQVWRMRGKDLWVKDFLIHDVPKDRV-FCLIKAIEDREIL
         KENE  IY L+VETE+IE  AVL +G +S ++     ++  NG++YA  ++DP T +  IQVWRM+ KDLW+K+F+I D+P +     LIKA ED EIL
Subjt:  -KENECVIYGLDVETEKIESIAVLEVGSYSRNA----RIQTSNGTIYAMIFVDPFTPSHKIQVWRMRGKDLWVKDFLIHDVPKDRV-FCLIKAIEDREIL

Query:  FLVGDELF
         +V  + F
Subjt:  FLVGDELF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCACCTCGGCCTCGGCCCAATGCCGAGGCCGAGGGTCTGGTCGGCCTCGGCCCAATACCGAGGCCGACCAGGCCAATTAAGCCCACTGGCCACTTGGATACCTATGA
CAATTTATGTGATGGCATATTTAATCCAATGACTGGAGAATTCTTTAAACTTTGTGGACCTGAAAAACAAGAAGATATTTATGCCTTCAGATTTGGTTTCAACCCTAAAA
TCAAGCAGTACAAATTGTTCAAAGTTTTCCCTAACAAAGTAGATTCCAGTCGTACAATGGAGATTTTAACGATTGGTAGAGGTGGAACCAATCAAAATCATAACCAATGG
AGGCATGTTTCCCTGCCTTTTGCCCTAACACTTTACCATCACGGTGCTTACTTGAATGAAGTGATGTATTGGATCGGAAGACAAAAAGAAAATGAGTGTGTCATATATGG
TCTTGATGTTGAAACTGAGAAGATTGAATCCATTGCGGTCTTGGAAGTTGGCTCTTACTCCAGGAATGCGAGGATTCAAACATCTAATGGCACCATTTATGCAATGATTT
TCGTGGACCCATTCACACCATCTCATAAGATTCAAGTGTGGAGGATGCGAGGGAAAGATTTATGGGTCAAAGACTTTCTTATTCATGACGTACCAAAGGATAGAGTATTT
TGCCTCATTAAAGCCATTGAAGATAGAGAAATATTGTTTCTGGTCGGAGATGAGTTATTTAGGAAGATCAATATCAAAACATTGATTCTACATGGCAGACGAGTTGTAGC
GGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCACCTCGGCCTCGGCCCAATGCCGAGGCCGAGGGTCTGGTCGGCCTCGGCCCAATACCGAGGCCGACCAGGCCAATTAAGCCCACTGGCCACTTGGATACCTATGA
CAATTTATGTGATGGCATATTTAATCCAATGACTGGAGAATTCTTTAAACTTTGTGGACCTGAAAAACAAGAAGATATTTATGCCTTCAGATTTGGTTTCAACCCTAAAA
TCAAGCAGTACAAATTGTTCAAAGTTTTCCCTAACAAAGTAGATTCCAGTCGTACAATGGAGATTTTAACGATTGGTAGAGGTGGAACCAATCAAAATCATAACCAATGG
AGGCATGTTTCCCTGCCTTTTGCCCTAACACTTTACCATCACGGTGCTTACTTGAATGAAGTGATGTATTGGATCGGAAGACAAAAAGAAAATGAGTGTGTCATATATGG
TCTTGATGTTGAAACTGAGAAGATTGAATCCATTGCGGTCTTGGAAGTTGGCTCTTACTCCAGGAATGCGAGGATTCAAACATCTAATGGCACCATTTATGCAATGATTT
TCGTGGACCCATTCACACCATCTCATAAGATTCAAGTGTGGAGGATGCGAGGGAAAGATTTATGGGTCAAAGACTTTCTTATTCATGACGTACCAAAGGATAGAGTATTT
TGCCTCATTAAAGCCATTGAAGATAGAGAAATATTGTTTCTGGTCGGAGATGAGTTATTTAGGAAGATCAATATCAAAACATTGATTCTACATGGCAGACGAGTTGTAGC
GGCTTAA
Protein sequenceShow/hide protein sequence
MSPRPRPNAEAEGLVGLGPIPRPTRPIKPTGHLDTYDNLCDGIFNPMTGEFFKLCGPEKQEDIYAFRFGFNPKIKQYKLFKVFPNKVDSSRTMEILTIGRGGTNQNHNQW
RHVSLPFALTLYHHGAYLNEVMYWIGRQKENECVIYGLDVETEKIESIAVLEVGSYSRNARIQTSNGTIYAMIFVDPFTPSHKIQVWRMRGKDLWVKDFLIHDVPKDRVF
CLIKAIEDREILFLVGDELFRKINIKTLILHGRRVVAA