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Spg006035 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg006035
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold7:30846726..30852746
RNA-Seq ExpressionSpg006035
SyntenySpg006035
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0016740 - transferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041121.1 hypothetical protein E6C27_scaffold128G00290 [Cucumis melo var. makuwa]1.3e-2457.55Show/hide
Query:  VLVGLGY----TSTGFSSKPGGSLVFSDVLSILECTSRIRS-------------SIWPRGNRSSLQTGELDKTISIDYMTEILSPRLYGTVCTQ------
        VL GL Y     ST FSSK GG LVFSD LSILE     +               I PRGNR SLQTGELD TISIDYMTEILS RLYGTVCT       
Subjt:  VLVGLGY----TSTGFSSKPGGSLVFSDVLSILECTSRIRS-------------SIWPRGNRSSLQTGELDKTISIDYMTEILSPRLYGTVCTQ------

Query:  -----------VEIELPVPDTLPTSAESSGSSFSTWVEL
                   VEIELPVPD LPTSAESS S+ STW+EL
Subjt:  -----------VEIELPVPDTLPTSAESSGSSFSTWVEL

KAA0066850.1 putative DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.8e-2664.66Show/hide
Query:  STGFSSKPGGSLVFSDVLSILEC--TSRIRSSIWPRGNRSSLQTGELDKTISIDYMTEILSPRLYGTVCTQ-----------------VEIELPVPDTLP
        STGFSSKPGG LVFSD LSILE   +++    IWPR NR SLQTGELDKT+SIDYMTEILS R YGTVCTQ                 VEIELPVPDTLP
Subjt:  STGFSSKPGGSLVFSDVLSILEC--TSRIRSSIWPRGNRSSLQTGELDKTISIDYMTEILSPRLYGTVCTQ-----------------VEIELPVPDTLP

Query:  TSAESSGSSFSTWVEL
        +S ES  S+ STW+EL
Subjt:  TSAESSGSSFSTWVEL

TYK08801.1 hypothetical protein E5676_scaffold796G00040 [Cucumis melo var. makuwa]3.3e-2036.67Show/hide
Query:  HCQMELFAS---ASLFEYEATRKKLEDEVIRKKSIKFRTMTSNKLGKAHAKPTIAESVFNLSTSDVLVGLGYTSTGFSSKPGGSLVFSDVLSILECTSRI
        HC++ LF     + L  + +   +  +E ++++  +FR +   K+GK+  K                      STGFSSKP G LVFSD LSILE     
Subjt:  HCQMELFAS---ASLFEYEATRKKLEDEVIRKKSIKFRTMTSNKLGKAHAKPTIAESVFNLSTSDVLVGLGYTSTGFSSKPGGSLVFSDVLSILECTSRI

Query:  RSSIW-------------PRGNRSSLQTGELDK-TISIDYMTEILSPRLYGTVCTQV-------------------------------------------
        +   W             PRGNRSSLQTG+LDK  ISIDYMTEILS RLYGTVC QV                                           
Subjt:  RSSIW-------------PRGNRSSLQTGELDK-TISIDYMTEILSPRLYGTVCTQV-------------------------------------------

Query:  --------------EIELPVPDTLPTSAESSGSSFSTWVE
                      EIEL VPDTLPTSAESSGS+ STW+E
Subjt:  --------------EIELPVPDTLPTSAESSGSSFSTWVE

TYK21916.1 hypothetical protein E5676_scaffold494G00570 [Cucumis melo var. makuwa]3.0e-2156.72Show/hide
Query:  VLVGLGY----TSTGFSSKPGGSLVFSDVLSILECTSRIRS-------------SIWPRGNRSSLQTGELDKTISIDYMTEILSPRLYGTVCTQ------
        VL GL Y     ST FSSK GG LVFSD LSILE     +               I PRGNRSSLQT ELD TISIDYMTEILS RLYGTVCT       
Subjt:  VLVGLGY----TSTGFSSKPGGSLVFSDVLSILECTSRIRS-------------SIWPRGNRSSLQTGELDKTISIDYMTEILSPRLYGTVCTQ------

Query:  -----------VEIELPVPDTLPTSAESSGSSFS
                   VEIELPVPD LPTSAESS S+ S
Subjt:  -----------VEIELPVPDTLPTSAESSGSSFS

TYK27997.1 putative DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.8e-2664.66Show/hide
Query:  STGFSSKPGGSLVFSDVLSILEC--TSRIRSSIWPRGNRSSLQTGELDKTISIDYMTEILSPRLYGTVCTQ-----------------VEIELPVPDTLP
        STGFSSKPGG LVFSD LSILE   +++    IWPR NR SLQTGELDKT+SIDYMTEILS R YGTVCTQ                 VEIELPVPDTLP
Subjt:  STGFSSKPGGSLVFSDVLSILEC--TSRIRSSIWPRGNRSSLQTGELDKTISIDYMTEILSPRLYGTVCTQ-----------------VEIELPVPDTLP

Query:  TSAESSGSSFSTWVEL
        +S ES  S+ STW+EL
Subjt:  TSAESSGSSFSTWVEL

TrEMBL top hitse value%identityAlignment
A0A5A7THH5 Uncharacterized protein6.3e-2557.55Show/hide
Query:  VLVGLGY----TSTGFSSKPGGSLVFSDVLSILECTSRIRS-------------SIWPRGNRSSLQTGELDKTISIDYMTEILSPRLYGTVCTQ------
        VL GL Y     ST FSSK GG LVFSD LSILE     +               I PRGNR SLQTGELD TISIDYMTEILS RLYGTVCT       
Subjt:  VLVGLGY----TSTGFSSKPGGSLVFSDVLSILECTSRIRS-------------SIWPRGNRSSLQTGELDKTISIDYMTEILSPRLYGTVCTQ------

Query:  -----------VEIELPVPDTLPTSAESSGSSFSTWVEL
                   VEIELPVPD LPTSAESS S+ STW+EL
Subjt:  -----------VEIELPVPDTLPTSAESSGSSFSTWVEL

A0A5A7VI26 Putative DNA/RNA polymerases superfamily protein8.7e-2764.66Show/hide
Query:  STGFSSKPGGSLVFSDVLSILEC--TSRIRSSIWPRGNRSSLQTGELDKTISIDYMTEILSPRLYGTVCTQ-----------------VEIELPVPDTLP
        STGFSSKPGG LVFSD LSILE   +++    IWPR NR SLQTGELDKT+SIDYMTEILS R YGTVCTQ                 VEIELPVPDTLP
Subjt:  STGFSSKPGGSLVFSDVLSILEC--TSRIRSSIWPRGNRSSLQTGELDKTISIDYMTEILSPRLYGTVCTQ-----------------VEIELPVPDTLP

Query:  TSAESSGSSFSTWVEL
        +S ES  S+ STW+EL
Subjt:  TSAESSGSSFSTWVEL

A0A5D3CAC6 Uncharacterized protein1.6e-2036.67Show/hide
Query:  HCQMELFAS---ASLFEYEATRKKLEDEVIRKKSIKFRTMTSNKLGKAHAKPTIAESVFNLSTSDVLVGLGYTSTGFSSKPGGSLVFSDVLSILECTSRI
        HC++ LF     + L  + +   +  +E ++++  +FR +   K+GK+  K                      STGFSSKP G LVFSD LSILE     
Subjt:  HCQMELFAS---ASLFEYEATRKKLEDEVIRKKSIKFRTMTSNKLGKAHAKPTIAESVFNLSTSDVLVGLGYTSTGFSSKPGGSLVFSDVLSILECTSRI

Query:  RSSIW-------------PRGNRSSLQTGELDK-TISIDYMTEILSPRLYGTVCTQV-------------------------------------------
        +   W             PRGNRSSLQTG+LDK  ISIDYMTEILS RLYGTVC QV                                           
Subjt:  RSSIW-------------PRGNRSSLQTGELDK-TISIDYMTEILSPRLYGTVCTQV-------------------------------------------

Query:  --------------EIELPVPDTLPTSAESSGSSFSTWVE
                      EIEL VPDTLPTSAESSGS+ STW+E
Subjt:  --------------EIELPVPDTLPTSAESSGSSFSTWVE

A0A5D3DE96 Uncharacterized protein1.4e-2156.72Show/hide
Query:  VLVGLGY----TSTGFSSKPGGSLVFSDVLSILECTSRIRS-------------SIWPRGNRSSLQTGELDKTISIDYMTEILSPRLYGTVCTQ------
        VL GL Y     ST FSSK GG LVFSD LSILE     +               I PRGNRSSLQT ELD TISIDYMTEILS RLYGTVCT       
Subjt:  VLVGLGY----TSTGFSSKPGGSLVFSDVLSILECTSRIRS-------------SIWPRGNRSSLQTGELDKTISIDYMTEILSPRLYGTVCTQ------

Query:  -----------VEIELPVPDTLPTSAESSGSSFS
                   VEIELPVPD LPTSAESS S+ S
Subjt:  -----------VEIELPVPDTLPTSAESSGSSFS

A0A5D3DW05 Putative DNA/RNA polymerases superfamily protein8.7e-2764.66Show/hide
Query:  STGFSSKPGGSLVFSDVLSILEC--TSRIRSSIWPRGNRSSLQTGELDKTISIDYMTEILSPRLYGTVCTQ-----------------VEIELPVPDTLP
        STGFSSKPGG LVFSD LSILE   +++    IWPR NR SLQTGELDKT+SIDYMTEILS R YGTVCTQ                 VEIELPVPDTLP
Subjt:  STGFSSKPGGSLVFSDVLSILEC--TSRIRSSIWPRGNRSSLQTGELDKTISIDYMTEILSPRLYGTVCTQ-----------------VEIELPVPDTLP

Query:  TSAESSGSSFSTWVEL
        +S ES  S+ STW+EL
Subjt:  TSAESSGSSFSTWVEL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAAGAAAATGATGGTAACATTGCTATTATGCATTGTGGTGGTGGCAACACTACAATTCTCTGTAGCCAAGGATGTGGCCGACATGGAGGCTAAATTCAAGATGGC
AGTTGATGCCTTTCCCTGCTTGAAAGGATGCGCCCAACAATGTAAAGCCAAACGCATTAAGTCCGTTGAGGATTGTATGGCATCATGCAAACATTGTCAAATGGAACTGT
TTGCGAGTGCGAGCTTGTTCGAATATGAAGCCACGCGGAAGAAGTTGGAAGATGAAGTCATCAGGAAGAAGTCAATCAAATTTCGTACAATGACAAGTAACAAACTGGGA
AAGGCTCATGCAAAGCCAACCATTGCAGAATCTGTGTTCAACCTGTCAACCTCTGATGTTTTAGTCGGTTTGGGCTACACAAGCACAGGATTTTCGAGCAAACCAGGAGG
ATCTCTGGTGTTCTCTGATGTTTTGAGTATTCTGGAGTGCACAAGTCGAATCAGAAGCTCTATTTGGCCAAGAGGAAATAGGTCGAGTCTACAGACCGGGGAACTAGATA
AGACTATTTCTATTGACTACATGACTGAGATATTGAGCCCGAGGCTATATGGTACCGTGTGCACACAGGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCT
GCTGAAAGTTCCGGATCAAGCTTCAGTACGTGGGTGGAGTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAAGAAAATGATGGTAACATTGCTATTATGCATTGTGGTGGTGGCAACACTACAATTCTCTGTAGCCAAGGATGTGGCCGACATGGAGGCTAAATTCAAGATGGC
AGTTGATGCCTTTCCCTGCTTGAAAGGATGCGCCCAACAATGTAAAGCCAAACGCATTAAGTCCGTTGAGGATTGTATGGCATCATGCAAACATTGTCAAATGGAACTGT
TTGCGAGTGCGAGCTTGTTCGAATATGAAGCCACGCGGAAGAAGTTGGAAGATGAAGTCATCAGGAAGAAGTCAATCAAATTTCGTACAATGACAAGTAACAAACTGGGA
AAGGCTCATGCAAAGCCAACCATTGCAGAATCTGTGTTCAACCTGTCAACCTCTGATGTTTTAGTCGGTTTGGGCTACACAAGCACAGGATTTTCGAGCAAACCAGGAGG
ATCTCTGGTGTTCTCTGATGTTTTGAGTATTCTGGAGTGCACAAGTCGAATCAGAAGCTCTATTTGGCCAAGAGGAAATAGGTCGAGTCTACAGACCGGGGAACTAGATA
AGACTATTTCTATTGACTACATGACTGAGATATTGAGCCCGAGGCTATATGGTACCGTGTGCACACAGGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCT
GCTGAAAGTTCCGGATCAAGCTTCAGTACGTGGGTGGAGTTGTAA
Protein sequenceShow/hide protein sequence
MAKKMMVTLLLCIVVVATLQFSVAKDVADMEAKFKMAVDAFPCLKGCAQQCKAKRIKSVEDCMASCKHCQMELFASASLFEYEATRKKLEDEVIRKKSIKFRTMTSNKLG
KAHAKPTIAESVFNLSTSDVLVGLGYTSTGFSSKPGGSLVFSDVLSILECTSRIRSSIWPRGNRSSLQTGELDKTISIDYMTEILSPRLYGTVCTQVEIELPVPDTLPTS
AESSGSSFSTWVEL