; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg006038 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg006038
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionAtp synthase subunit beta
Genome locationscaffold7:30998486..31001426
RNA-Seq ExpressionSpg006038
SyntenySpg006038
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAF2086426.1 unnamed protein product [Brassica napus]4.6e-4953.07Show/hide
Query:  ELCLSGAKPEETLVEARSDTDVQIIRLTWVGRRDCFVEQHHRIESSKWAIFGKQNWRCGMNRKPGYGALLRANLDPTKGVGRLRH---------------
        ELCLSGAKPEETLVE+RSDTDVQI+ LTWVGR  CFV   H IESSKWAIFGKQNWRCGMNRKPGYGA LRANLDPTKGVGRLR                
Subjt:  ELCLSGAKPEETLVEARSDTDVQIIRLTWVGRRDCFVEQHHRIESSKWAIFGKQNWRCGMNRKPGYGALLRANLDPTKGVGRLRH---------------

Query:  ----------------------------------------LPTLETAQPEVGSSGWKSTACRVVSKV----------------NSLWSMEQYRQLKSEKW
                                                LP+LETAQPEVGSS WKSTA RVVS                   +   +   RQ KS K 
Subjt:  ----------------------------------------LPTLETAQPEVGSSGWKSTACRVVSKV----------------NSLWSMEQYRQLKSEKW

Query:  IYNLGKRIGSEGWVRGSQSRTRRLSVDC
        I N GKRIGSEGW +GSQ RTRRL   C
Subjt:  IYNLGKRIGSEGWVRGSQSRTRRLSVDC

KAF1855774.1 hypothetical protein Lal_00045041 [Lupinus albus]2.3e-4846.69Show/hide
Query:  ELCLSGAKPEETLVEARSDTDVQIIRLTWV------------------GRRDCFVEQHHRIESSKWAIFGKQNWRCGMNRKPGYGALLRANLDPTKGVGR
        ELCLSGAKPEETLVEARSDTDVQI+RLTW+                  GRR CFVE  H IESSKWAIFGKQNWRCGMNRK GYGA LRANLDPTKGVGR
Subjt:  ELCLSGAKPEETLVEARSDTDVQIIRLTWV------------------GRRDCFVEQHHRIESSKWAIFGKQNWRCGMNRKPGYGALLRANLDPTKGVGR

Query:  LRH-----------------------------------------------------LPTLETAQPEVGSSGWKSTACRVVSKV--NSLWSME--------
        LR                                                      LPTLETAQPEVGSSGWKSTA RVVS     +L + E        
Subjt:  LRH-----------------------------------------------------LPTLETAQPEVGSSGWKSTACRVVSKV--NSLWSME--------

Query:  ----QYRQLKSEKWIYNLGKRIGSEGWVRGSQSRTRRLSVDCSTAFAVRAGCRVPTGGRTGNDSLGSLPRASNSQLRTGTNKGSPTV
            + R    +      GK +       G              A A RAG RVP G   G    G LPRASNS+LRTGT+KG+PTV
Subjt:  ----QYRQLKSEKWIYNLGKRIGSEGWVRGSQSRTRRLSVDCSTAFAVRAGCRVPTGGRTGNDSLGSLPRASNSQLRTGTNKGSPTV

KAG5568993.1 hypothetical protein H5410_064037 [Solanum commersonii]4.4e-5246.42Show/hide
Query:  ELCLSGAKPEETLVEARSDTDVQIIRLTWVGRRDCFVEQHHRIESSKWAIFGKQNWRCGMNRKPGYGALLRANLDPTKGVGRLRH---------------
        ELCLSGAKPEETLVEARSDTDVQI+RLTWVGRR CFVE  H I+SSKWAIFGKQNWRCGMNRKPGYGA LRANLDPTKGVGRLR                
Subjt:  ELCLSGAKPEETLVEARSDTDVQIIRLTWVGRRDCFVEQHHRIESSKWAIFGKQNWRCGMNRKPGYGALLRANLDPTKGVGRLRH---------------

Query:  ---------------------------------------------------------------------------------------LPTLETAQPEVGS
                                                                                               LPTLE+AQPEVGS
Subjt:  ---------------------------------------------------------------------------------------LPTLETAQPEVGS

Query:  SGWKSTACRVVSKV-----------------NSLWSMEQYRQLKSEKWIYNLGKRIGSEGWVRGSQSRTRRLSVDCSTAFAVRAGCRVPTGGR
        SGWKSTA RVVS                    +   +   RQ KS KWI N GKRIGSEGW RGSQSRTRRLSVDCS+     +G   P  GR
Subjt:  SGWKSTACRVVSKV-----------------NSLWSMEQYRQLKSEKWIYNLGKRIGSEGWVRGSQSRTRRLSVDCSTAFAVRAGCRVPTGGR

KAG9438724.1 hypothetical protein H6P81_021319 [Aristolochia fimbriata]3.7e-5158.29Show/hide
Query:  QIIRLTWVGRRDCFVEQHHRIESSKWAIFGKQNWRCGMNRKPGYGALLRANLDPTKGVGRLRH--------------LPTLETAQPEVGSSGWKSTACRV
        +I RLTWVGR  CFVE  H IESSKWAIFGKQNWRCGMNRKPGYGA LRANL+PTKGVGRLR               LPTLETAQPEVGSSGWKSTA RV
Subjt:  QIIRLTWVGRRDCFVEQHHRIESSKWAIFGKQNWRCGMNRKPGYGALLRANLDPTKGVGRLRH--------------LPTLETAQPEVGSSGWKSTACRV

Query:  VSKV-----------------NSLWSMEQYRQLKSEKWIYNLGKRIGSEGWVRGSQSRTRRLSVDCSTAFAVRAG-CRVPTGGRTGNDSLGSLPRASNSQ
        VS                    +   +   RQ KS KWI N GKRIGSEGW RGSQS+   LSVDCS      A  CR   GGR G   LG  P    +Q
Subjt:  VSKV-----------------NSLWSMEQYRQLKSEKWIYNLGKRIGSEGWVRGSQSRTRRLSVDCSTAFAVRAG-CRVPTGGRTGNDSLGSLPRASNSQ

Query:  LRTGTNKGSPT
        L  GT+KG+PT
Subjt:  LRTGTNKGSPT

TXG51763.1 hypothetical protein EZV62_024287 [Acer yangbiense]6.4e-5972.78Show/hide
Query:  TDVQIIRLTWVGRRDCFVEQHHRIESSKWAIFGKQNWRCGMNRKPGYGALLRANLDPTKGVGRLRH--------------LPTLETAQPEVGSSGWKSTA
        TD+ ++R   VGRR CFVE  H IESSKWAIFGKQNWRCGMNRKPGYGA LRANL+PTKGVGRLR               LPTLETAQPEVGSSGWKSTA
Subjt:  TDVQIIRLTWVGRRDCFVEQHHRIESSKWAIFGKQNWRCGMNRKPGYGALLRANLDPTKGVGRLRH--------------LPTLETAQPEVGSSGWKSTA

Query:  CRVVSKVNSLWSMEQYRQLKSEKWIYNLGKRIGSEGWVRGSQSRTRRLSVDCSTAFAVRAGCRVPTGGR
         RVVSKVNSLWSMEQ RQ KS KWI N GKRIGSEGW RGSQSRTRRLSVDCS+ F   +G   P  GR
Subjt:  CRVVSKVNSLWSMEQYRQLKSEKWIYNLGKRIGSEGWVRGSQSRTRRLSVDCSTAFAVRAGCRVPTGGR

TrEMBL top hitse value%identityAlignment
A0A078J1A8 BnaC08g46150D protein1.2e-4260.61Show/hide
Query:  ELCLSGAKPEETLVEARSDTDVQIIRLTWVGRRDCFVEQHHRIESSKWAIFGKQNWRCGMNRKPGYGALLRANLDPTKGVGRLRH---------------
        ELCLSGAKPEETLVEARSDTDVQI+RLTWVGR  CFVE  H IESSKWAIFGKQNWRCGMNRKPGYGA LRANL+PTKGVGRLR                
Subjt:  ELCLSGAKPEETLVEARSDTDVQIIRLTWVGRRDCFVEQHHRIESSKWAIFGKQNWRCGMNRKPGYGALLRANLDPTKGVGRLRH---------------

Query:  ----------------------------------------LPTLETAQPEVGSSGWKSTACRVVS
                                                LPTLETAQPEVGSSGWKSTA RVVS
Subjt:  ----------------------------------------LPTLETAQPEVGSSGWKSTACRVVS

A0A0D3BAS1 Uncharacterized protein5.9e-4257.22Show/hide
Query:  PEETLVEARSDTDVQIIRLTWVGRRDCFVEQHHRIESSKWAIFGKQNWRCGMNRKPGYGALLRANLDPTKGVGRLRH--------------LPTLETAQP
        P  T +E R+  +  +     VGR  CFVE  H IESSKWAIFGKQNWRCGMNRKPGYGA LRANL+PTKGVGRLR               LPTLETAQP
Subjt:  PEETLVEARSDTDVQIIRLTWVGRRDCFVEQHHRIESSKWAIFGKQNWRCGMNRKPGYGALLRANLDPTKGVGRLRH--------------LPTLETAQP

Query:  EVGSSGWKSTACRVVSKV-----------------NSLWSMEQYRQLKSEKWIYNLGKRIGSEGWVRGSQSRTRRLSVDC
        EVGSSGWKSTA RVVS                    +   +   RQ KS KWI N GKRIGSEGW RGSQ RTRRL   C
Subjt:  EVGSSGWKSTACRVVSKV-----------------NSLWSMEQYRQLKSEKWIYNLGKRIGSEGWVRGSQSRTRRLSVDC

A0A0L9UL04 Uncharacterized protein8.7e-4659.6Show/hide
Query:  ELCLSGAKPEETLVEARSDTDVQIIRLTWVGRRDCFVEQHHRIESSKWAIFGKQNWRCGMNRKPGYGALLRANLDPTKGVGRLRHLPTLETAQPEVGSSG
        ELCLSGAKPEETLVEA SDTDVQI+RLT VGR    VE  H IESSK AIFGKQNWRCGMNRK GYGA LRANLDPTKGVGRLRHLPTLETAQPEVGSSG
Subjt:  ELCLSGAKPEETLVEARSDTDVQIIRLTWVGRRDCFVEQHHRIESSKWAIFGKQNWRCGMNRKPGYGALLRANLDPTKGVGRLRHLPTLETAQPEVGSSG

Query:  WKSTACRVVSKVN--SLWSMEQY------RQLKSEKWIYNLGKRIGSEGWVRGSQSRTRRLSVDCSTAFAVRAGCRVPTGGRTGNDSLG-SLPRASNS
        WK TA RVVS     +L + E+       R+   +      GK +       G              A A RAG RVP GGR  N   G S P A  S
Subjt:  WKSTACRVVSKVN--SLWSMEQY------RQLKSEKWIYNLGKRIGSEGWVRGSQSRTRRLSVDCSTAFAVRAGCRVPTGGRTGNDSLG-SLPRASNS

A0A5C7H437 Uncharacterized protein3.1e-5972.78Show/hide
Query:  TDVQIIRLTWVGRRDCFVEQHHRIESSKWAIFGKQNWRCGMNRKPGYGALLRANLDPTKGVGRLRH--------------LPTLETAQPEVGSSGWKSTA
        TD+ ++R   VGRR CFVE  H IESSKWAIFGKQNWRCGMNRKPGYGA LRANL+PTKGVGRLR               LPTLETAQPEVGSSGWKSTA
Subjt:  TDVQIIRLTWVGRRDCFVEQHHRIESSKWAIFGKQNWRCGMNRKPGYGALLRANLDPTKGVGRLRH--------------LPTLETAQPEVGSSGWKSTA

Query:  CRVVSKVNSLWSMEQYRQLKSEKWIYNLGKRIGSEGWVRGSQSRTRRLSVDCSTAFAVRAGCRVPTGGR
         RVVSKVNSLWSMEQ RQ KS KWI N GKRIGSEGW RGSQSRTRRLSVDCS+ F   +G   P  GR
Subjt:  CRVVSKVNSLWSMEQYRQLKSEKWIYNLGKRIGSEGWVRGSQSRTRRLSVDCSTAFAVRAGCRVPTGGR

A0A6A5KZG0 Uncharacterized protein1.1e-4846.69Show/hide
Query:  ELCLSGAKPEETLVEARSDTDVQIIRLTWV------------------GRRDCFVEQHHRIESSKWAIFGKQNWRCGMNRKPGYGALLRANLDPTKGVGR
        ELCLSGAKPEETLVEARSDTDVQI+RLTW+                  GRR CFVE  H IESSKWAIFGKQNWRCGMNRK GYGA LRANLDPTKGVGR
Subjt:  ELCLSGAKPEETLVEARSDTDVQIIRLTWV------------------GRRDCFVEQHHRIESSKWAIFGKQNWRCGMNRKPGYGALLRANLDPTKGVGR

Query:  LRH-----------------------------------------------------LPTLETAQPEVGSSGWKSTACRVVSKV--NSLWSME--------
        LR                                                      LPTLETAQPEVGSSGWKSTA RVVS     +L + E        
Subjt:  LRH-----------------------------------------------------LPTLETAQPEVGSSGWKSTACRVVSKV--NSLWSME--------

Query:  ----QYRQLKSEKWIYNLGKRIGSEGWVRGSQSRTRRLSVDCSTAFAVRAGCRVPTGGRTGNDSLGSLPRASNSQLRTGTNKGSPTV
            + R    +      GK +       G              A A RAG RVP G   G    G LPRASNS+LRTGT+KG+PTV
Subjt:  ----QYRQLKSEKWIYNLGKRIGSEGWVRGSQSRTRRLSVDCSTAFAVRAGCRVPTGGRTGNDSLGSLPRASNSQLRTGTNKGSPTV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGCGATCGAGGAGGACGATGCATCATCCAACACACCAAGATGAGTGGGCATTGATGTCACAAGAAGGCATAAGCATATTGAGAAGCAACAGTGTCGTCAGACGCGT
TAGTGTGCATATGAGTGAATTATGCAAGCCCACAAAGTTTCGTGTCAATCGGACACCAGACGGGCACTCCACGTTGGCGCGTGGGCGAGCGTTGCAAGACGAGTGTCTTG
GGCGTCTTCCTTTGGGAATGGTTTTCCAAGGACAGTGTTGGGCGGCACGGGTGTGCCAACATTGCGCCCCCGCCCATGGGCTAGAGGTTGCACCATATGGCCGGGTTGCG
GCACGCTATACGAAAATGACTCAGCATGACTCGGAAGGGGTACGAACACATCCTGGCGAAGTTCCAGATCGATGTAGAGGCGTGTACGACCGTGACAGCGCGCACGCAGG
GGAGGGGCGTGGGCGTGGGGCGCGCGCATGCCCGCGGGGCGGCACATGGGACGGGGGTCGGAGTGCCACGCGCGCAGGGGTGGGGGTGGGCTTGGCGCGCGTAGAGGGCC
TGGGAGTGTGCGTGGCGCGCGCGCAAGGGAGGCGTGGGGCACGCTCAGGGGCTGGGCGTGGGCGTGGGAGTGGCGCGCGCGCAAGATCTGAACTATGCCTGAGCGGGGCG
AAGCCAGAGGAAACTCTAGTGGAGGCTCGCAGTGATACTGACGTGCAAATCATTCGTCTGACTTGGGTAGGACGACGCGACTGCTTTGTTGAGCAGCACCACAGAATCGA
GAGCTCCAAGTGGGCCATTTTTGGTAAGCAGAACTGGCGATGCGGGATGAACCGGAAGCCAGGTTACGGTGCCTTACTGCGCGCTAACCTAGATCCCACAAAGGGTGTTG
GTCGATTAAGACACCTGCCCACCCTGGAAACGGCTCAGCCGGAGGTAGGGTCCAGCGGCTGGAAGAGCACCGCATGTCGTGTGGTCTCCAAGGTGAACAGCCTCTGGTCG
ATGGAACAATATAGGCAATTGAAGTCGGAAAAATGGATCTATAACCTCGGGAAAAGGATTGGCTCTGAGGGCTGGGTACGGGGATCCCAATCCCGAACCCGTCGGCTGTC
GGTGGACTGCTCGACTGCTTTCGCAGTGAGAGCGGGTTGCCGCGTGCCGACCGGGGGACGGACTGGGAACGACTCTCTCGGGAGTCTTCCCCGGGCGTCGAACAGTCAAC
TCAGAACTGGTACGAACAAGGGGAGTCCGACTGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGATGCGATCGAGGAGGACGATGCATCATCCAACACACCAAGATGAGTGGGCATTGATGTCACAAGAAGGCATAAGCATATTGAGAAGCAACAGTGTCGTCAGACGCGT
TAGTGTGCATATGAGTGAATTATGCAAGCCCACAAAGTTTCGTGTCAATCGGACACCAGACGGGCACTCCACGTTGGCGCGTGGGCGAGCGTTGCAAGACGAGTGTCTTG
GGCGTCTTCCTTTGGGAATGGTTTTCCAAGGACAGTGTTGGGCGGCACGGGTGTGCCAACATTGCGCCCCCGCCCATGGGCTAGAGGTTGCACCATATGGCCGGGTTGCG
GCACGCTATACGAAAATGACTCAGCATGACTCGGAAGGGGTACGAACACATCCTGGCGAAGTTCCAGATCGATGTAGAGGCGTGTACGACCGTGACAGCGCGCACGCAGG
GGAGGGGCGTGGGCGTGGGGCGCGCGCATGCCCGCGGGGCGGCACATGGGACGGGGGTCGGAGTGCCACGCGCGCAGGGGTGGGGGTGGGCTTGGCGCGCGTAGAGGGCC
TGGGAGTGTGCGTGGCGCGCGCGCAAGGGAGGCGTGGGGCACGCTCAGGGGCTGGGCGTGGGCGTGGGAGTGGCGCGCGCGCAAGATCTGAACTATGCCTGAGCGGGGCG
AAGCCAGAGGAAACTCTAGTGGAGGCTCGCAGTGATACTGACGTGCAAATCATTCGTCTGACTTGGGTAGGACGACGCGACTGCTTTGTTGAGCAGCACCACAGAATCGA
GAGCTCCAAGTGGGCCATTTTTGGTAAGCAGAACTGGCGATGCGGGATGAACCGGAAGCCAGGTTACGGTGCCTTACTGCGCGCTAACCTAGATCCCACAAAGGGTGTTG
GTCGATTAAGACACCTGCCCACCCTGGAAACGGCTCAGCCGGAGGTAGGGTCCAGCGGCTGGAAGAGCACCGCATGTCGTGTGGTCTCCAAGGTGAACAGCCTCTGGTCG
ATGGAACAATATAGGCAATTGAAGTCGGAAAAATGGATCTATAACCTCGGGAAAAGGATTGGCTCTGAGGGCTGGGTACGGGGATCCCAATCCCGAACCCGTCGGCTGTC
GGTGGACTGCTCGACTGCTTTCGCAGTGAGAGCGGGTTGCCGCGTGCCGACCGGGGGACGGACTGGGAACGACTCTCTCGGGAGTCTTCCCCGGGCGTCGAACAGTCAAC
TCAGAACTGGTACGAACAAGGGGAGTCCGACTGTTTAA
Protein sequenceShow/hide protein sequence
MMRSRRTMHHPTHQDEWALMSQEGISILRSNSVVRRVSVHMSELCKPTKFRVNRTPDGHSTLARGRALQDECLGRLPLGMVFQGQCWAARVCQHCAPAHGLEVAPYGRVA
ARYTKMTQHDSEGVRTHPGEVPDRCRGVYDRDSAHAGEGRGRGARACPRGGTWDGGRSATRAGVGVGLARVEGLGVCVARAQGRRGARSGAGRGRGSGARARSELCLSGA
KPEETLVEARSDTDVQIIRLTWVGRRDCFVEQHHRIESSKWAIFGKQNWRCGMNRKPGYGALLRANLDPTKGVGRLRHLPTLETAQPEVGSSGWKSTACRVVSKVNSLWS
MEQYRQLKSEKWIYNLGKRIGSEGWVRGSQSRTRRLSVDCSTAFAVRAGCRVPTGGRTGNDSLGSLPRASNSQLRTGTNKGSPTV