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Spg006041 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg006041
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptioncyclin-dependent kinase C-2-like
Genome locationscaffold7:31291721..31292011
RNA-Seq ExpressionSpg006041
SyntenySpg006041
Gene Ontology termsGO:0032968 - positive regulation of transcription elongation from RNA polymerase II promoter (biological process)
GO:0051726 - regulation of cell cycle (biological process)
GO:0070816 - phosphorylation of RNA polymerase II C-terminal domain (biological process)
GO:0000307 - cyclin-dependent protein kinase holoenzyme complex (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0004693 - cyclin-dependent protein serine/threonine kinase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0008353 - RNA polymerase II CTD heptapeptide repeat kinase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053658.1 cyclin-dependent kinase C-2-like [Cucumis melo var. makuwa]1.1e-3090.36Show/hide
Query:  YNHPSRGGQGGGGYGNTQYAQGRGAPYGSGNMSGAGPRGGA-GGGYGVGAPNYPQNGPYVGSSGTGRGSNVMGENRNQQYGWQ
        YNHPSRG QGGGGYGN+QYAQGRGAPYGSGNMSGAGPRGGA GGGYGVGA +YPQNGPY GSSGTGRGSN MG NRNQQYGWQ
Subjt:  YNHPSRGGQGGGGYGNTQYAQGRGAPYGSGNMSGAGPRGGA-GGGYGVGAPNYPQNGPYVGSSGTGRGSNVMGENRNQQYGWQ

KAG6602268.1 Glucomannan 4-beta-mannosyltransferase 9, partial [Cucurbita argyrosperma subsp. sororia]3.8e-3189.41Show/hide
Query:  YNHPSRGGQGGGGYGNTQYAQGRGAPYGSGNMSGAGPRGGA---GGGYGVGAPNYPQNGPYVGSSGTGRGSNVMGENRNQQYGWQ
        YNHPSRGGQ GG YGN QYAQGRGAPYGSGNMSGAGPRGGA   GGGYG GAPNYPQNGPY GSSGTGRGSNVMG NRNQQYGWQ
Subjt:  YNHPSRGGQGGGGYGNTQYAQGRGAPYGSGNMSGAGPRGGA---GGGYGVGAPNYPQNGPYVGSSGTGRGSNVMGENRNQQYGWQ

KAG7032951.1 Cyclin-dependent kinase C-1 [Cucurbita argyrosperma subsp. argyrosperma]4.9e-3188.37Show/hide
Query:  YNHPSRGGQGGGGYGNTQYAQGRGAPYGSGNMSGAGPRGGA----GGGYGVGAPNYPQNGPYVGSSGTGRGSNVMGENRNQQYGWQ
        YNHPSRGGQ GG YGN QYAQGRGAPYGSGNMSGAGPRGGA    GGGYG GAPNYPQNGPY GSSGTGRGSNVMG NRNQQYGWQ
Subjt:  YNHPSRGGQGGGGYGNTQYAQGRGAPYGSGNMSGAGPRGGA----GGGYGVGAPNYPQNGPYVGSSGTGRGSNVMGENRNQQYGWQ

XP_022153776.1 cyclin-dependent kinase C-2-like [Momordica charantia]8.4e-3188.37Show/hide
Query:  YNHPSRGGQGGGGYGNTQYAQGRGAPYGSGNMSGAGPRGGAGGG----YGVGAPNYPQNGPYVGSSGTGRGSNVMGENRNQQYGWQ
        YNHPSRGGQGGGGYGN QYAQGRGAPYGSGNMS AGPRGG GGG    YGVGAPNY QNGPY GSSGTGRGSNVMG NRNQQYGWQ
Subjt:  YNHPSRGGQGGGGYGNTQYAQGRGAPYGSGNMSGAGPRGGAGGG----YGVGAPNYPQNGPYVGSSGTGRGSNVMGENRNQQYGWQ

XP_022963041.1 cyclin-dependent kinase C-1-like [Cucurbita moschata]3.8e-3189.41Show/hide
Query:  YNHPSRGGQGGGGYGNTQYAQGRGAPYGSGNMSGAGPRGGA---GGGYGVGAPNYPQNGPYVGSSGTGRGSNVMGENRNQQYGWQ
        YNHPSRGGQ GG YGN QYAQGRGAPYGSGNMSGAGPRGGA   GGGYG GAPNYPQNGPY GSSGTGRGSNVMG NRNQQYGWQ
Subjt:  YNHPSRGGQGGGGYGNTQYAQGRGAPYGSGNMSGAGPRGGA---GGGYGVGAPNYPQNGPYVGSSGTGRGSNVMGENRNQQYGWQ

TrEMBL top hitse value%identityAlignment
A0A1S3B891 cyclin-dependent kinase C-2-like5.3e-3190.36Show/hide
Query:  YNHPSRGGQGGGGYGNTQYAQGRGAPYGSGNMSGAGPRGGA-GGGYGVGAPNYPQNGPYVGSSGTGRGSNVMGENRNQQYGWQ
        YNHPSRG QGGGGYGN+QYAQGRGAPYGSGNMSGAGPRGGA GGGYGVGA +YPQNGPY GSSGTGRGSN MG NRNQQYGWQ
Subjt:  YNHPSRGGQGGGGYGNTQYAQGRGAPYGSGNMSGAGPRGGA-GGGYGVGAPNYPQNGPYVGSSGTGRGSNVMGENRNQQYGWQ

A0A5D3BRW4 Cyclin-dependent kinase C-2-like5.3e-3190.36Show/hide
Query:  YNHPSRGGQGGGGYGNTQYAQGRGAPYGSGNMSGAGPRGGA-GGGYGVGAPNYPQNGPYVGSSGTGRGSNVMGENRNQQYGWQ
        YNHPSRG QGGGGYGN+QYAQGRGAPYGSGNMSGAGPRGGA GGGYGVGA +YPQNGPY GSSGTGRGSN MG NRNQQYGWQ
Subjt:  YNHPSRGGQGGGGYGNTQYAQGRGAPYGSGNMSGAGPRGGA-GGGYGVGAPNYPQNGPYVGSSGTGRGSNVMGENRNQQYGWQ

A0A6J1DLQ7 cyclin-dependent kinase C-2-like4.1e-3188.37Show/hide
Query:  YNHPSRGGQGGGGYGNTQYAQGRGAPYGSGNMSGAGPRGGAGGG----YGVGAPNYPQNGPYVGSSGTGRGSNVMGENRNQQYGWQ
        YNHPSRGGQGGGGYGN QYAQGRGAPYGSGNMS AGPRGG GGG    YGVGAPNY QNGPY GSSGTGRGSNVMG NRNQQYGWQ
Subjt:  YNHPSRGGQGGGGYGNTQYAQGRGAPYGSGNMSGAGPRGGAGGG----YGVGAPNYPQNGPYVGSSGTGRGSNVMGENRNQQYGWQ

A0A6J1HEZ3 cyclin-dependent kinase C-1-like1.8e-3189.41Show/hide
Query:  YNHPSRGGQGGGGYGNTQYAQGRGAPYGSGNMSGAGPRGGA---GGGYGVGAPNYPQNGPYVGSSGTGRGSNVMGENRNQQYGWQ
        YNHPSRGGQ GG YGN QYAQGRGAPYGSGNMSGAGPRGGA   GGGYG GAPNYPQNGPY GSSGTGRGSNVMG NRNQQYGWQ
Subjt:  YNHPSRGGQGGGGYGNTQYAQGRGAPYGSGNMSGAGPRGGA---GGGYGVGAPNYPQNGPYVGSSGTGRGSNVMGENRNQQYGWQ

A0A6J1JPS2 cyclin-dependent kinase C-1-like2.6e-3087.06Show/hide
Query:  YNHPSRGGQGGGGYGNTQYAQGRGAPYGSGNMSGAGPRGGA---GGGYGVGAPNYPQNGPYVGSSGTGRGSNVMGENRNQQYGWQ
        YNHPSR GQ GG YGN QYAQGRGAPYGSGNMSGAGPRGGA   GGGYG GAPNYPQNGPY GSSGTGRGSN MG NRNQQYGWQ
Subjt:  YNHPSRGGQGGGGYGNTQYAQGRGAPYGSGNMSGAGPRGGA---GGGYGVGAPNYPQNGPYVGSSGTGRGSNVMGENRNQQYGWQ

SwissProt top hitse value%identityAlignment
Q5JK68 Cyclin-dependent kinase C-22.0e-1163.95Show/hide
Query:  HPSRGGQGGGGYGNTQY-AQGRG-APYGSGNMSGA-GPRGGAGGGYGVGAPNYPQNGPYVGSSGTGRGSNV-MGENRN-QQYG-WQ
        +P+RGGQ GGGYG+  Y  QGRG  PY  G M GA GPRGG G GYGVG PNY Q GPY G+SG GRG N   G +RN QQYG WQ
Subjt:  HPSRGGQGGGGYGNTQY-AQGRG-APYGSGNMSGA-GPRGGAGGGYGVGAPNYPQNGPYVGSSGTGRGSNV-MGENRN-QQYG-WQ

Q6I5Y0 Cyclin-dependent kinase C-15.0e-1060.67Show/hide
Query:  HPSRGGQGGGG-YGNTQY-AQGRGAP---YGSGNMSGAGPRGGAGGGYGVGAPNYPQNGPYVGSSGTGRGSNV--MGENRN-QQYG-WQ
        +P+RGGQGGGG YGN  Y  QGRG P    GSG     GPRGG GGGYG G  NYPQ G   G SG GRGSN    G +RN QQYG WQ
Subjt:  HPSRGGQGGGG-YGNTQY-AQGRGAP---YGSGNMSGAGPRGGAGGGYGVGAPNYPQNGPYVGSSGTGRGSNV--MGENRN-QQYG-WQ

Q8W4P1 Cyclin-dependent kinase C-29.1e-1260.24Show/hide
Query:  YNHPSRGGQGGGGYGNTQYAQGRGAPYGSGNMSGAGPRGGAGGGYGVGAPNYPQ-NGPYVGSSGTGRGSNVMGENRNQQYGWQ
        YN+ SRGG   G Y      QGRGAPY      GAGPR G  GGYGVG PNY Q  G Y GS G+GRG N MG  RNQQYGWQ
Subjt:  YNHPSRGGQGGGGYGNTQYAQGRGAPYGSGNMSGAGPRGGAGGGYGVGAPNYPQ-NGPYVGSSGTGRGSNVMGENRNQQYGWQ

Q9LFT8 Cyclin-dependent kinase C-12.5e-0953.85Show/hide
Query:  NRYNHPSRGGQGG------GGYGNTQY-AQGRGAPYGSGNMSGAGPRGGAGGGYGVGAPNYPQNGPYVGSSGTGRGSNVMGENRNQQYGWQ
        NRY  P  G Q G      GGY +  Y  QGRGAPY       AGPRG +GG YGVG PNY Q G Y GS  +GRG N     RNQQYGWQ
Subjt:  NRYNHPSRGGQGG------GGYGNTQY-AQGRGAPYGSGNMSGAGPRGGAGGGYGVGAPNYPQNGPYVGSSGTGRGSNVMGENRNQQYGWQ

Arabidopsis top hitse value%identityAlignment
AT5G10270.1 cyclin-dependent kinase C;11.8e-1053.85Show/hide
Query:  NRYNHPSRGGQGG------GGYGNTQY-AQGRGAPYGSGNMSGAGPRGGAGGGYGVGAPNYPQNGPYVGSSGTGRGSNVMGENRNQQYGWQ
        NRY  P  G Q G      GGY +  Y  QGRGAPY       AGPRG +GG YGVG PNY Q G Y GS  +GRG N     RNQQYGWQ
Subjt:  NRYNHPSRGGQGG------GGYGNTQY-AQGRGAPYGSGNMSGAGPRGGAGGGYGVGAPNYPQNGPYVGSSGTGRGSNVMGENRNQQYGWQ

AT5G64960.1 cyclin dependent kinase group C26.5e-1360.24Show/hide
Query:  YNHPSRGGQGGGGYGNTQYAQGRGAPYGSGNMSGAGPRGGAGGGYGVGAPNYPQ-NGPYVGSSGTGRGSNVMGENRNQQYGWQ
        YN+ SRGG   G Y      QGRGAPY      GAGPR G  GGYGVG PNY Q  G Y GS G+GRG N MG  RNQQYGWQ
Subjt:  YNHPSRGGQGGGGYGNTQYAQGRGAPYGSGNMSGAGPRGGAGGGYGVGAPNYPQ-NGPYVGSSGTGRGSNVMGENRNQQYGWQ

AT5G64960.2 cyclin dependent kinase group C26.5e-1360.24Show/hide
Query:  YNHPSRGGQGGGGYGNTQYAQGRGAPYGSGNMSGAGPRGGAGGGYGVGAPNYPQ-NGPYVGSSGTGRGSNVMGENRNQQYGWQ
        YN+ SRGG   G Y      QGRGAPY      GAGPR G  GGYGVG PNY Q  G Y GS G+GRG N MG  RNQQYGWQ
Subjt:  YNHPSRGGQGGGGYGNTQYAQGRGAPYGSGNMSGAGPRGGAGGGYGVGAPNYPQ-NGPYVGSSGTGRGSNVMGENRNQQYGWQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGAGTATTTTCTTCACTATCTCTGTAAAAGCAACAGATACAACCACCCAAGTCGTGGTGGTCAAGGTGGGGGTGGTTATGGCAACACACAATATGCTCAGGGACG
TGGTGCACCCTATGGTTCTGGTAACATGTCTGGTGCTGGTCCCCGGGGTGGAGCTGGGGGTGGTTATGGCGTTGGAGCTCCAAATTACCCTCAGAATGGTCCATATGTCG
GTAGTTCTGGCACTGGCCGTGGCTCTAATGTGATGGGCGAAAACCGAAACCAACAATATGGGTGGCAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTGAGTATTTTCTTCACTATCTCTGTAAAAGCAACAGATACAACCACCCAAGTCGTGGTGGTCAAGGTGGGGGTGGTTATGGCAACACACAATATGCTCAGGGACG
TGGTGCACCCTATGGTTCTGGTAACATGTCTGGTGCTGGTCCCCGGGGTGGAGCTGGGGGTGGTTATGGCGTTGGAGCTCCAAATTACCCTCAGAATGGTCCATATGTCG
GTAGTTCTGGCACTGGCCGTGGCTCTAATGTGATGGGCGAAAACCGAAACCAACAATATGGGTGGCAATAG
Protein sequenceShow/hide protein sequence
MVEYFLHYLCKSNRYNHPSRGGQGGGGYGNTQYAQGRGAPYGSGNMSGAGPRGGAGGGYGVGAPNYPQNGPYVGSSGTGRGSNVMGENRNQQYGWQ