CuGenDBv2

Gene ID	Spg006057
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	cyclin-dependent kinase C-2-like
Genome location	scaffold7:31282325..31282615
RNA-Seq Expression	Spg006057
Synteny	Spg006057
Gene Ontology terms	GO:0032968 - positive regulation of transcription elongation from RNA polymerase II promoter (biological process) GO:0051726 - regulation of cell cycle (biological process) GO:0070816 - phosphorylation of RNA polymerase II C-terminal domain (biological process) GO:0000307 - cyclin-dependent protein kinase holoenzyme complex (cellular component) GO:0005634 - nucleus (cellular component) GO:0004693 - cyclin-dependent protein serine/threonine kinase activity (molecular function) GO:0005524 - ATP binding (molecular function) GO:0008353 - RNA polymerase II CTD heptapeptide repeat kinase activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0053658.1 cyclin-dependent kinase C-2-like [Cucumis melo var. makuwa]

3.2e-30

90.36

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Query:  YNHPSRGGQGGGGYGNTQYAQGRGAPYGSGNMSGAGPRGGA-GGGYGVGAPNYPQNGPYAGSSGTGRGSNVMSENRNQQYGWQ
        YNHPSRG QGGGGYGN+QYAQGRGAPYGSGNMSGAGPRGGA GGGYGVGA +YPQNGPYAGSSGTGRGSN M  NRNQQYGWQ
Subjt:  YNHPSRGGQGGGGYGNTQYAQGRGAPYGSGNMSGAGPRGGA-GGGYGVGAPNYPQNGPYAGSSGTGRGSNVMSENRNQQYGWQ

KAG6602268.1 Glucomannan 4-beta-mannosyltransferase 9, partial [Cucurbita argyrosperma subsp. sororia]

1.1e-30

89.41

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Query:  YNHPSRGGQGGGGYGNTQYAQGRGAPYGSGNMSGAGPRGGA---GGGYGVGAPNYPQNGPYAGSSGTGRGSNVMSENRNQQYGWQ
        YNHPSRGGQ GG YGN QYAQGRGAPYGSGNMSGAGPRGGA   GGGYG GAPNYPQNGPYAGSSGTGRGSNVM  NRNQQYGWQ
Subjt:  YNHPSRGGQGGGGYGNTQYAQGRGAPYGSGNMSGAGPRGGA---GGGYGVGAPNYPQNGPYAGSSGTGRGSNVMSENRNQQYGWQ

KAG7032951.1 Cyclin-dependent kinase C-1 [Cucurbita argyrosperma subsp. argyrosperma]

1.4e-30

88.37

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Query:  YNHPSRGGQGGGGYGNTQYAQGRGAPYGSGNMSGAGPRGGA----GGGYGVGAPNYPQNGPYAGSSGTGRGSNVMSENRNQQYGWQ
        YNHPSRGGQ GG YGN QYAQGRGAPYGSGNMSGAGPRGGA    GGGYG GAPNYPQNGPYAGSSGTGRGSNVM  NRNQQYGWQ
Subjt:  YNHPSRGGQGGGGYGNTQYAQGRGAPYGSGNMSGAGPRGGA----GGGYGVGAPNYPQNGPYAGSSGTGRGSNVMSENRNQQYGWQ

XP_022153776.1 cyclin-dependent kinase C-2-like [Momordica charantia]

2.5e-30

88.37

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Query:  YNHPSRGGQGGGGYGNTQYAQGRGAPYGSGNMSGAGPRGGAGGG----YGVGAPNYPQNGPYAGSSGTGRGSNVMSENRNQQYGWQ
        YNHPSRGGQGGGGYGN QYAQGRGAPYGSGNMS AGPRGG GGG    YGVGAPNY QNGPYAGSSGTGRGSNVM  NRNQQYGWQ
Subjt:  YNHPSRGGQGGGGYGNTQYAQGRGAPYGSGNMSGAGPRGGAGGG----YGVGAPNYPQNGPYAGSSGTGRGSNVMSENRNQQYGWQ

XP_022963041.1 cyclin-dependent kinase C-1-like [Cucurbita moschata]

1.1e-30

89.41

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Query:  YNHPSRGGQGGGGYGNTQYAQGRGAPYGSGNMSGAGPRGGA---GGGYGVGAPNYPQNGPYAGSSGTGRGSNVMSENRNQQYGWQ
        YNHPSRGGQ GG YGN QYAQGRGAPYGSGNMSGAGPRGGA   GGGYG GAPNYPQNGPYAGSSGTGRGSNVM  NRNQQYGWQ
Subjt:  YNHPSRGGQGGGGYGNTQYAQGRGAPYGSGNMSGAGPRGGA---GGGYGVGAPNYPQNGPYAGSSGTGRGSNVMSENRNQQYGWQ

TrEMBL top hits

e value

%identity

Alignment

A0A1S3B891 cyclin-dependent kinase C-2-like

1.6e-30

90.36

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Query:  YNHPSRGGQGGGGYGNTQYAQGRGAPYGSGNMSGAGPRGGA-GGGYGVGAPNYPQNGPYAGSSGTGRGSNVMSENRNQQYGWQ
        YNHPSRG QGGGGYGN+QYAQGRGAPYGSGNMSGAGPRGGA GGGYGVGA +YPQNGPYAGSSGTGRGSN M  NRNQQYGWQ
Subjt:  YNHPSRGGQGGGGYGNTQYAQGRGAPYGSGNMSGAGPRGGA-GGGYGVGAPNYPQNGPYAGSSGTGRGSNVMSENRNQQYGWQ

A0A5D3BRW4 Cyclin-dependent kinase C-2-like

1.6e-30

90.36

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Query:  YNHPSRGGQGGGGYGNTQYAQGRGAPYGSGNMSGAGPRGGA-GGGYGVGAPNYPQNGPYAGSSGTGRGSNVMSENRNQQYGWQ
        YNHPSRG QGGGGYGN+QYAQGRGAPYGSGNMSGAGPRGGA GGGYGVGA +YPQNGPYAGSSGTGRGSN M  NRNQQYGWQ
Subjt:  YNHPSRGGQGGGGYGNTQYAQGRGAPYGSGNMSGAGPRGGA-GGGYGVGAPNYPQNGPYAGSSGTGRGSNVMSENRNQQYGWQ

A0A6J1DLQ7 cyclin-dependent kinase C-2-like

1.2e-30

88.37

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Query:  YNHPSRGGQGGGGYGNTQYAQGRGAPYGSGNMSGAGPRGGAGGG----YGVGAPNYPQNGPYAGSSGTGRGSNVMSENRNQQYGWQ
        YNHPSRGGQGGGGYGN QYAQGRGAPYGSGNMS AGPRGG GGG    YGVGAPNY QNGPYAGSSGTGRGSNVM  NRNQQYGWQ
Subjt:  YNHPSRGGQGGGGYGNTQYAQGRGAPYGSGNMSGAGPRGGAGGG----YGVGAPNYPQNGPYAGSSGTGRGSNVMSENRNQQYGWQ

A0A6J1HEZ3 cyclin-dependent kinase C-1-like

5.3e-31

89.41

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Query:  YNHPSRGGQGGGGYGNTQYAQGRGAPYGSGNMSGAGPRGGA---GGGYGVGAPNYPQNGPYAGSSGTGRGSNVMSENRNQQYGWQ
        YNHPSRGGQ GG YGN QYAQGRGAPYGSGNMSGAGPRGGA   GGGYG GAPNYPQNGPYAGSSGTGRGSNVM  NRNQQYGWQ
Subjt:  YNHPSRGGQGGGGYGNTQYAQGRGAPYGSGNMSGAGPRGGA---GGGYGVGAPNYPQNGPYAGSSGTGRGSNVMSENRNQQYGWQ

A0A6J1JPS2 cyclin-dependent kinase C-1-like

7.7e-30

87.06

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Query:  YNHPSRGGQGGGGYGNTQYAQGRGAPYGSGNMSGAGPRGGA---GGGYGVGAPNYPQNGPYAGSSGTGRGSNVMSENRNQQYGWQ
        YNHPSR GQ GG YGN QYAQGRGAPYGSGNMSGAGPRGGA   GGGYG GAPNYPQNGPYAGSSGTGRGSN M  NRNQQYGWQ
Subjt:  YNHPSRGGQGGGGYGNTQYAQGRGAPYGSGNMSGAGPRGGA---GGGYGVGAPNYPQNGPYAGSSGTGRGSNVMSENRNQQYGWQ

SwissProt top hits

e value

%identity

Alignment

Q5JK68 Cyclin-dependent kinase C-2

1.3e-10

62.79

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Query:  HPSRGGQGGGGYGNTQY-AQGRG-APYGSGNMSGA-GPRGGAGGGYGVGAPNYPQNGPYAGSSGTGRGSNV-MSENRN-QQYG-WQ
        +P+RGGQ GGGYG+  Y  QGRG  PY  G M GA GPRGG G GYGVG PNY Q GPY G+SG GRG N     +RN QQYG WQ
Subjt:  HPSRGGQGGGGYGNTQY-AQGRG-APYGSGNMSGA-GPRGGAGGGYGVGAPNYPQNGPYAGSSGTGRGSNV-MSENRN-QQYG-WQ

Q6I5Y0 Cyclin-dependent kinase C-1

3.2e-09

59.55

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Query:  HPSRGGQGGGG-YGNTQY-AQGRGAP---YGSGNMSGAGPRGGAGGGYGVGAPNYPQNGPYAGSSGTGRGSNVMSE--NRN-QQYG-WQ
        +P+RGGQGGGG YGN  Y  QGRG P    GSG     GPRGG GGGYG G  NYPQ G   G SG GRGSN   +  +RN QQYG WQ
Subjt:  HPSRGGQGGGG-YGNTQY-AQGRGAP---YGSGNMSGAGPRGGAGGGYGVGAPNYPQNGPYAGSSGTGRGSNVMSE--NRN-QQYG-WQ

Q8W4P1 Cyclin-dependent kinase C-2

2.7e-11

59.04

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Query:  YNHPSRGGQGGGGYGNTQYAQGRGAPYGSGNMSGAGPRGGAGGGYGVGAPNYPQ-NGPYAGSSGTGRGSNVMSENRNQQYGWQ
        YN+ SRGG   G Y      QGRGAPY      GAGPR G  GGYGVG PNY Q  G Y GS G+GRG N M   RNQQYGWQ
Subjt:  YNHPSRGGQGGGGYGNTQYAQGRGAPYGSGNMSGAGPRGGAGGGYGVGAPNYPQ-NGPYAGSSGTGRGSNVMSENRNQQYGWQ

Q9LFT8 Cyclin-dependent kinase C-1

1.9e-09

53.85

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Query:  NRYNHPSRGGQGG------GGYGNTQY-AQGRGAPYGSGNMSGAGPRGGAGGGYGVGAPNYPQNGPYAGSSGTGRGSNVMSENRNQQYGWQ
        NRY  P  G Q G      GGY +  Y  QGRGAPY       AGPRG +GG YGVG PNY Q G Y GS  +GRG N     RNQQYGWQ
Subjt:  NRYNHPSRGGQGG------GGYGNTQY-AQGRGAPYGSGNMSGAGPRGGAGGGYGVGAPNYPQNGPYAGSSGTGRGSNVMSENRNQQYGWQ

Arabidopsis top hits

e value

%identity

Alignment

AT5G10270.1 cyclin-dependent kinase C;1

1.4e-10

53.85

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Query:  NRYNHPSRGGQGG------GGYGNTQY-AQGRGAPYGSGNMSGAGPRGGAGGGYGVGAPNYPQNGPYAGSSGTGRGSNVMSENRNQQYGWQ
        NRY  P  G Q G      GGY +  Y  QGRGAPY       AGPRG +GG YGVG PNY Q G Y GS  +GRG N     RNQQYGWQ
Subjt:  NRYNHPSRGGQGG------GGYGNTQY-AQGRGAPYGSGNMSGAGPRGGAGGGYGVGAPNYPQNGPYAGSSGTGRGSNVMSENRNQQYGWQ

AT5G64960.1 cyclin dependent kinase group C2

1.9e-12

59.04

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Query:  YNHPSRGGQGGGGYGNTQYAQGRGAPYGSGNMSGAGPRGGAGGGYGVGAPNYPQ-NGPYAGSSGTGRGSNVMSENRNQQYGWQ
        YN+ SRGG   G Y      QGRGAPY      GAGPR G  GGYGVG PNY Q  G Y GS G+GRG N M   RNQQYGWQ
Subjt:  YNHPSRGGQGGGGYGNTQYAQGRGAPYGSGNMSGAGPRGGAGGGYGVGAPNYPQ-NGPYAGSSGTGRGSNVMSENRNQQYGWQ

AT5G64960.2 cyclin dependent kinase group C2

1.9e-12

59.04

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Query:  YNHPSRGGQGGGGYGNTQYAQGRGAPYGSGNMSGAGPRGGAGGGYGVGAPNYPQ-NGPYAGSSGTGRGSNVMSENRNQQYGWQ
        YN+ SRGG   G Y      QGRGAPY      GAGPR G  GGYGVG PNY Q  G Y GS G+GRG N M   RNQQYGWQ
Subjt:  YNHPSRGGQGGGGYGNTQYAQGRGAPYGSGNMSGAGPRGGAGGGYGVGAPNYPQ-NGPYAGSSGTGRGSNVMSENRNQQYGWQ

Sequences

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CDS sequence

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ATGGTTGAGTATTTTCTTCACTATCTCTGTAAAAGCAACAGATACAACCACCCAAGTCGTGGTGGTCAAGGTGGGGGTGGTTATGGCAACACACAATATGCTCAGGGACG
TGGTGCACCCTATGGTTCTGGTAACATGTCTGGTGCTGGTCCCCGGGGTGGAGCTGGGGGTGGTTATGGCGTTGGAGCTCCAAATTACCCTCAGAATGGTCCATATGCCG
GTAGTTCTGGCACTGGCCGTGGCTCTAATGTGATGAGCGAAAACCGAAACCAACAATATGGGTGGCAATAG

mRNA sequence

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Protein sequence

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MVEYFLHYLCKSNRYNHPSRGGQGGGGYGNTQYAQGRGAPYGSGNMSGAGPRGGAGGGYGVGAPNYPQNGPYAGSSGTGRGSNVMSENRNQQYGWQ

Spg006057 (gene) of Sponge gourd (cylindrica) v1 genome