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Spg006110 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg006110
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTripartite motif-containing protein 5
Genome locationscaffold4:5287104..5288828
RNA-Seq ExpressionSpg006110
SyntenySpg006110
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAD7116479.1 hypothetical protein E3N88_03747 [Mikania micrantha]7.5e-2196.83Show/hide
Query:  MSLRIKAVVDKFVEELKEALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRREGRI
        MSLRIKAVVDKFVEELKEALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRRE  I
Subjt:  MSLRIKAVVDKFVEELKEALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRREGRI

PSS08228.1 Midasin like [Actinidia chinensis var. chinensis]7.5e-2196.83Show/hide
Query:  MSLRIKAVVDKFVEELKEALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRREGRI
        MSLRIKAVVDKFVEELKEALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRRE  I
Subjt:  MSLRIKAVVDKFVEELKEALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRREGRI

RVX20853.1 hypothetical protein CK203_002652 [Vitis vinifera]3.4e-2192.42Show/hide
Query:  MSLRIKAVVDKFVEELKEALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRREGRILGG
        MSLRIKAVVDKFV+ELKEALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRREG +  G
Subjt:  MSLRIKAVVDKFVEELKEALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRREGRILGG

XP_010530976.1 PREDICTED: uncharacterized protein LOC104807412 [Tarenaya hassleriana]7.5e-2196.83Show/hide
Query:  MSLRIKAVVDKFVEELKEALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRREGRI
        MSLRIKAVVDKFVEELKEALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRRE  I
Subjt:  MSLRIKAVVDKFVEELKEALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRREGRI

XP_042978810.1 uncharacterized protein LOC122309396 isoform X3 [Carya illinoinensis]5.8e-2151.77Show/hide
Query:  MSLRIKAVVDKFVEELKEALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRREGRILGGTGCPFPLSIVFIFTSKSRKKRKKESFTTGNNDDD
        MSLRIK VVDKFV+ELKEALDADIQDRIMKEREMQSYI+EREREVAEREAAWK ELSRREG        P+ +S+  +  S                   
Subjt:  MSLRIKAVVDKFVEELKEALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRREGRILGGTGCPFPLSIVFIFTSKSRKKRKKESFTTGNNDDD

Query:  DDESKINDGFSSCVDSFLSSLSLLGRDCTTRSKVEDGEGKS
                               LGRDC TRS+ +DGE KS
Subjt:  DDESKINDGFSSCVDSFLSSLSLLGRDCTTRSKVEDGEGKS

TrEMBL top hitse value%identityAlignment
A0A438KI25 Uncharacterized protein1.6e-2192.42Show/hide
Query:  MSLRIKAVVDKFVEELKEALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRREGRILGG
        MSLRIKAVVDKFV+ELKEALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRREG +  G
Subjt:  MSLRIKAVVDKFVEELKEALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRREGRILGG

A0A5N6PSF2 Uncharacterized protein3.7e-2196.83Show/hide
Query:  MSLRIKAVVDKFVEELKEALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRREGRI
        MSLRIKAVVDKFVEELKEALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRRE  I
Subjt:  MSLRIKAVVDKFVEELKEALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRREGRI

A0A7J0F7U1 Uncharacterized protein3.7e-2196.83Show/hide
Query:  MSLRIKAVVDKFVEELKEALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRREGRI
        MSLRIKAVVDKFVEELKEALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRRE  I
Subjt:  MSLRIKAVVDKFVEELKEALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRREGRI

A0A803QTG4 Uncharacterized protein2.1e-2149.36Show/hide
Query:  MSLRIKAVVDKFVEELKEALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRREGRILGGTGCPFPLSIVFIFTSKSRKKRKKESFTTGNNDDD
        MSLRIKAVVDKFV+ELKEALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRR                                         
Subjt:  MSLRIKAVVDKFVEELKEALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRREGRILGGTGCPFPLSIVFIFTSKSRKKRKKESFTTGNNDDD

Query:  DDESKINDGFSSCVDSFLSSLSLLGRDCTTRSKVEDGEGKSGKREKCANGNCIKSR
                                 RDC +RSK +DGE K  K EK  +GNCI+SR
Subjt:  DDESKINDGFSSCVDSFLSSLSLLGRDCTTRSKVEDGEGKSGKREKCANGNCIKSR

B9RKZ1 Uncharacterized protein3.7e-2196.83Show/hide
Query:  MSLRIKAVVDKFVEELKEALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRREGRI
        MSLRIKAVVDKFVEELKEALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRRE  I
Subjt:  MSLRIKAVVDKFVEELKEALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRREGRI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G17350.1 unknown protein1.0e-2393.65Show/hide
Query:  MSLRIKAVVDKFVEELKEALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRREGRI
        MSLRIK VVDKFVEELK+ALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRRE  I
Subjt:  MSLRIKAVVDKFVEELKEALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRREGRI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCTGAGAATAAAGGCCGTGGTGGATAAATTCGTGGAGGAGCTCAAGGAAGCCTTGGATGCGGATATTCAAGATCGAATCATGAAGGAGAGAGAGATGCAGAGTTA
CATCGAAGAGCGCGAACGTGAGGTTGCTGAGCGCGAAGCTGCTTGGAAGGCGGAACTCTCCCGTCGCGAGGGCAGAATTCTTGGTGGTACTGGATGTCCATTTCCCTTGT
CTATTGTTTTCATATTTACCTCCAAATCTAGGAAGAAAAGAAAGAAAGAGTCTTTTACTACTGGAAATAATGATGATGATGATGATGAAAGTAAAATCAATGATGGCTTC
TCATCATGTGTTGATTCTTTTCTTTCCTCTCTCTCTCTTTTAGGCAGAGATTGCACGACAAGAAGCAAGGTTGAAGATGGAGAAGGAAAATCTGGAAAAAGAGAAAAGTG
TGCTAATGGGAACTGCATCAAATCAAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTCTGAGAATAAAGGCCGTGGTGGATAAATTCGTGGAGGAGCTCAAGGAAGCCTTGGATGCGGATATTCAAGATCGAATCATGAAGGAGAGAGAGATGCAGAGTTA
CATCGAAGAGCGCGAACGTGAGGTTGCTGAGCGCGAAGCTGCTTGGAAGGCGGAACTCTCCCGTCGCGAGGGCAGAATTCTTGGTGGTACTGGATGTCCATTTCCCTTGT
CTATTGTTTTCATATTTACCTCCAAATCTAGGAAGAAAAGAAAGAAAGAGTCTTTTACTACTGGAAATAATGATGATGATGATGATGAAAGTAAAATCAATGATGGCTTC
TCATCATGTGTTGATTCTTTTCTTTCCTCTCTCTCTCTTTTAGGCAGAGATTGCACGACAAGAAGCAAGGTTGAAGATGGAGAAGGAAAATCTGGAAAAAGAGAAAAGTG
TGCTAATGGGAACTGCATCAAATCAAGATAA
Protein sequenceShow/hide protein sequence
MSLRIKAVVDKFVEELKEALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRREGRILGGTGCPFPLSIVFIFTSKSRKKRKKESFTTGNNDDDDDESKINDGF
SSCVDSFLSSLSLLGRDCTTRSKVEDGEGKSGKREKCANGNCIKSR