CuGenDBv2

Gene ID	Spg006113
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Phosphatidylserine decarboxylase proenzyme 2
Genome location	scaffold4:3475790..3479061
RNA-Seq Expression	Spg006113
Synteny	Spg006113
Gene Ontology terms	GO:0006646 - phosphatidylethanolamine biosynthetic process (biological process) GO:0016540 - protein autoprocessing (biological process) GO:0016020 - membrane (cellular component) GO:0004609 - phosphatidylserine decarboxylase activity (molecular function) GO:0005509 - calcium ion binding (molecular function)
InterPro domains	IPR003817 - Phosphatidylserine decarboxylase-related

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008455245.1 PREDICTED: phosphatidylserine decarboxylase proenzyme 2-like [Cucumis melo]

1.8e-35

86.14

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Query:  MGNGTSKPD-SSSSSSSSSDPDAEESRIARFKNRLHLRRYLRRRRKGANARGFGSHTKLASAEDFAGIAVLKLIRAQMNFKDRWLACVSFGEQTFRTGIS
        MGNGTSK D SSSSSSSSSDPDAEESRI+RFKNR+HLRR+LRRRRK  N RGF SHTKL SAEDFAGIA+L LIRA+M+FKDRWLACVSFGEQTFRTGIS
Subjt:  MGNGTSKPD-SSSSSSSSSDPDAEESRIARFKNRLHLRRYLRRRRKGANARGFGSHTKLASAEDFAGIAVLKLIRAQMNFKDRWLACVSFGEQTFRTGIS

Query:  D
        D
Subjt:  D

XP_011658767.2 phosphatidylserine decarboxylase proenzyme 2 [Cucumis sativus]

1.2e-36

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Query:  MGNGTSKPDSSSSSSSSSDPDAEESRIARFKNRLHLRRYLRRRRKGANARGFGSHTKLASAEDFAGIAVLKLIRAQMNFKDRWLACVSFGEQTFRTGISD
        MGNGTSKPDSSS SSSSSDPDAEESRI+RFKNR+HLRR+LRRRRK  N R F SHTKL SAEDFAGIA+L LIRA+M+FKDRWLACVSFGEQTFRTGISD
Subjt:  MGNGTSKPDSSSSSSSSSDPDAEESRIARFKNRLHLRRYLRRRRKGANARGFGSHTKLASAEDFAGIAVLKLIRAQMNFKDRWLACVSFGEQTFRTGISD

XP_022154387.1 phosphatidylserine decarboxylase proenzyme 2-like [Momordica charantia]

1.6e-31

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Query:  MGNGTSKPDSSSSSSSSSDPDAEESRIARFKNRLHLRRYLRRRRKGANARGFGSHTKLASAEDFAGIAVLKLIRAQMNFKDRWLACVSFGEQTFRTGISD
        MGNG+S   + SSSSSSSDPDA++SR+ARFKNRLH RR+LRRRR+ +NARG GSHTKL S +DFAGIAVL LIRA+M FKD+WLACVSFGEQTFRTGISD
Subjt:  MGNGTSKPDSSSSSSSSSDPDAEESRIARFKNRLHLRRYLRRRRKGANARGFGSHTKLASAEDFAGIAVLKLIRAQMNFKDRWLACVSFGEQTFRTGISD

XP_022963616.1 phosphatidylserine decarboxylase proenzyme 2-like [Cucurbita moschata]

1.5e-29

77.23

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Query:  MGNGTSKPDSSSSSSSSSDPDAEESRIARFKNRLHLRRYLRRRRKG-ANARGFGSHTKLASAEDFAGIAVLKLIRAQMNFKDRWLACVSFGEQTFRTGIS
        MGNG+SK D    SSSSSDPDAE+SR +RFK R+HLRR+LRRRR G AN +G  SHTKL S EDFAGIAVL LI AQMNFKD+WLACVSFGEQTFRTGIS
Subjt:  MGNGTSKPDSSSSSSSSSDPDAEESRIARFKNRLHLRRYLRRRRKG-ANARGFGSHTKLASAEDFAGIAVLKLIRAQMNFKDRWLACVSFGEQTFRTGIS

Query:  D
        D
Subjt:  D

XP_038888956.1 phosphatidylserine decarboxylase proenzyme 2-like [Benincasa hispida]

9.9e-34

84.16

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Query:  MGNGTSKPDSSSSSSSSSDPDAEESRIARFKNRLHLRRYLRRRRKG-ANARGFGSHTKLASAEDFAGIAVLKLIRAQMNFKDRWLACVSFGEQTFRTGIS
        MGNG SK D SSSSSSSSDPDAEESRIARFK+R+HLRR+LRRRRKG  N RGF SHTKL S EDFAGIA+L LIRA+MNFKD+WLACVSFGEQTFRTGIS
Subjt:  MGNGTSKPDSSSSSSSSSDPDAEESRIARFKNRLHLRRYLRRRRKG-ANARGFGSHTKLASAEDFAGIAVLKLIRAQMNFKDRWLACVSFGEQTFRTGIS

Query:  D
        D
Subjt:  D

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K2G8 Uncharacterized protein

6.0e-37

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Query:  MGNGTSKPDSSSSSSSSSDPDAEESRIARFKNRLHLRRYLRRRRKGANARGFGSHTKLASAEDFAGIAVLKLIRAQMNFKDRWLACVSFGEQTFRTGISD
        MGNGTSKPDSSS SSSSSDPDAEESRI+RFKNR+HLRR+LRRRRK  N R F SHTKL SAEDFAGIA+L LIRA+M+FKDRWLACVSFGEQTFRTGISD
Subjt:  MGNGTSKPDSSSSSSSSSDPDAEESRIARFKNRLHLRRYLRRRRKGANARGFGSHTKLASAEDFAGIAVLKLIRAQMNFKDRWLACVSFGEQTFRTGISD

A0A1S3C020 Phosphatidylserine decarboxylase proenzyme 2

8.7e-36

86.14

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Query:  MGNGTSKPD-SSSSSSSSSDPDAEESRIARFKNRLHLRRYLRRRRKGANARGFGSHTKLASAEDFAGIAVLKLIRAQMNFKDRWLACVSFGEQTFRTGIS
        MGNGTSK D SSSSSSSSSDPDAEESRI+RFKNR+HLRR+LRRRRK  N RGF SHTKL SAEDFAGIA+L LIRA+M+FKDRWLACVSFGEQTFRTGIS
Subjt:  MGNGTSKPD-SSSSSSSSSDPDAEESRIARFKNRLHLRRYLRRRRKGANARGFGSHTKLASAEDFAGIAVLKLIRAQMNFKDRWLACVSFGEQTFRTGIS

Query:  D
        D
Subjt:  D

A0A6J1DLJ7 Phosphatidylserine decarboxylase proenzyme 2

7.6e-32

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Query:  MGNGTSKPDSSSSSSSSSDPDAEESRIARFKNRLHLRRYLRRRRKGANARGFGSHTKLASAEDFAGIAVLKLIRAQMNFKDRWLACVSFGEQTFRTGISD
        MGNG+S   + SSSSSSSDPDA++SR+ARFKNRLH RR+LRRRR+ +NARG GSHTKL S +DFAGIAVL LIRA+M FKD+WLACVSFGEQTFRTGISD
Subjt:  MGNGTSKPDSSSSSSSSSDPDAEESRIARFKNRLHLRRYLRRRRKGANARGFGSHTKLASAEDFAGIAVLKLIRAQMNFKDRWLACVSFGEQTFRTGISD

A0A6J1HGJ7 Phosphatidylserine decarboxylase proenzyme 2

7.1e-30

77.23

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Query:  MGNGTSKPDSSSSSSSSSDPDAEESRIARFKNRLHLRRYLRRRRKG-ANARGFGSHTKLASAEDFAGIAVLKLIRAQMNFKDRWLACVSFGEQTFRTGIS
        MGNG+SK D    SSSSSDPDAE+SR +RFK R+HLRR+LRRRR G AN +G  SHTKL S EDFAGIAVL LI AQMNFKD+WLACVSFGEQTFRTGIS
Subjt:  MGNGTSKPDSSSSSSSSSDPDAEESRIARFKNRLHLRRYLRRRRKG-ANARGFGSHTKLASAEDFAGIAVLKLIRAQMNFKDRWLACVSFGEQTFRTGIS

Query:  D
        D
Subjt:  D

A0A6J1HVG6 Phosphatidylserine decarboxylase proenzyme 2

1.2e-29

77.23

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Query:  MGNGTSKPDSSSSSSSSSDPDAEESRIARFKNRLHLRRYLRRRRKG-ANARGFGSHTKLASAEDFAGIAVLKLIRAQMNFKDRWLACVSFGEQTFRTGIS
        MGNG+SK D    SSSSSDPD EESR +RFK R+HLRR+LRRRR G AN +G  SHTKL S EDFAGIAVL LI AQMNFKD+WLACVSFGEQTFRTGIS
Subjt:  MGNGTSKPDSSSSSSSSSDPDAEESRIARFKNRLHLRRYLRRRRKG-ANARGFGSHTKLASAEDFAGIAVLKLIRAQMNFKDRWLACVSFGEQTFRTGIS

Query:  D
        D
Subjt:  D

SwissProt top hits

e value

%identity

Alignment

A4GNA8 Phosphatidylserine decarboxylase proenzyme 3

1.9e-11

44.55

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Query:  MGNGTSKPDSSSSSSSSSDPDAEESRIARFKNRLHLRRYLRR-RRKGANARGFGSHTKLASAEDFAGIAVLKLIRAQMNFKDRWLACVSFGEQTFRTGIS
        MGNG S              + +ESR ++ + ++   R  RR  R G+ +    +  +  SA+DFAGIA+L LI A+M FKD+WLACVSFGEQTFR+ IS
Subjt:  MGNGTSKPDSSSSSSSSSDPDAEESRIARFKNRLHLRRYLRR-RRKGANARGFGSHTKLASAEDFAGIAVLKLIRAQMNFKDRWLACVSFGEQTFRTGIS

Query:  D
        D
Subjt:  D

F4KAK5 Phosphatidylserine decarboxylase proenzyme 2

2.0e-13

49.5

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Query:  MGNGTSKPDSSSSSSSSSDPDAEESRIARFKNRLHLRRYLRRR-RKGANARGFGSHTKLASAEDFAGIAVLKLIRAQMNFKDRWLACVSFGEQTFRTGIS
        MGNG S+             +A+ESR +R +++L   R  RR  R   N+ G     +  SAEDF+GIA+L LI A+M FKD+WLACVSFGEQTFRT IS
Subjt:  MGNGTSKPDSSSSSSSSSDPDAEESRIARFKNRLHLRRYLRRR-RKGANARGFGSHTKLASAEDFAGIAVLKLIRAQMNFKDRWLACVSFGEQTFRTGIS

Query:  D
        D
Subjt:  D

Arabidopsis top hits

e value

%identity

Alignment

AT4G25970.1 phosphatidylserine decarboxylase 3

1.3e-12

44.55

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Query:  MGNGTSKPDSSSSSSSSSDPDAEESRIARFKNRLHLRRYLRR-RRKGANARGFGSHTKLASAEDFAGIAVLKLIRAQMNFKDRWLACVSFGEQTFRTGIS
        MGNG S              + +ESR ++ + ++   R  RR  R G+ +    +  +  SA+DFAGIA+L LI A+M FKD+WLACVSFGEQTFR+ IS
Subjt:  MGNGTSKPDSSSSSSSSSDPDAEESRIARFKNRLHLRRYLRR-RRKGANARGFGSHTKLASAEDFAGIAVLKLIRAQMNFKDRWLACVSFGEQTFRTGIS

Query:  D
        D
Subjt:  D

AT5G57190.1 phosphatidylserine decarboxylase 2

1.4e-14

49.5

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Query:  MGNGTSKPDSSSSSSSSSDPDAEESRIARFKNRLHLRRYLRRR-RKGANARGFGSHTKLASAEDFAGIAVLKLIRAQMNFKDRWLACVSFGEQTFRTGIS
        MGNG S+             +A+ESR +R +++L   R  RR  R   N+ G     +  SAEDF+GIA+L LI A+M FKD+WLACVSFGEQTFRT IS
Subjt:  MGNGTSKPDSSSSSSSSSDPDAEESRIARFKNRLHLRRYLRRR-RKGANARGFGSHTKLASAEDFAGIAVLKLIRAQMNFKDRWLACVSFGEQTFRTGIS

Query:  D
        D
Subjt:  D

Sequences

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CDS sequence

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ATGGGGAATGGCACTTCCAAGCCCGATTCCTCCTCCTCTTCATCTTCTTCTTCCGATCCCGATGCCGAAGAATCGCGTATTGCTCGATTCAAGAACCGTCTGCATCTTCG
TCGGTATCTTCGACGCCGTCGTAAAGGCGCCAATGCCCGGGGTTTTGGTTCTCACACCAAACTCGCCTCTGCGGAGGATTTCGCTGGAATCGCTGTTCTTAAGCTTATTC
GTGCGCAAATGAATTTCAAGGACAGGTGGCTTGCTTGTGTTTCGTTTGGAGAGCAGACTTTTCGGACGGGAATCTCTGATCAGTTAACTACCTTTGTGCTCCTATGTTCC
TTGACTGTTCAGCTTTTTTCTCACTTGCCTGCTGTGGAGTTAGCTTGTTTTCCTATAGCTGAAATTGATTTACCGTTTTCTTGTTCTAAATTAGGCAGCACTAAAGAACC
AGCTTGGAACTCTACTTCTCTTTGCACTTATGCACCGTCCATTACTATTGATGAGCTGCACGTTCTTTTGAAAACAGAGGAAAATGCTCTCAATAAGCAGTCCAAAGTTG
ATGATGTTGCTTCGATTACTTCGTTTGGCAATGGCAACGAATTATGA

mRNA sequence

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Protein sequence

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MGNGTSKPDSSSSSSSSSDPDAEESRIARFKNRLHLRRYLRRRRKGANARGFGSHTKLASAEDFAGIAVLKLIRAQMNFKDRWLACVSFGEQTFRTGISDQLTTFVLLCS
LTVQLFSHLPAVELACFPIAEIDLPFSCSKLGSTKEPAWNSTSLCTYAPSITIDELHVLLKTEENALNKQSKVDDVASITSFGNGNEL

Spg006113 (gene) of Sponge gourd (cylindrica) v1 genome