; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg006115 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg006115
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationscaffold4:4112857..4127937
RNA-Seq ExpressionSpg006115
SyntenySpg006115
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily
IPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008464969.1 PREDICTED: pentatricopeptide repeat-containing protein At1g10910, chloroplastic isoform X1 [Cucumis melo]2.7e-10863.91Show/hide
Query:  MLSRWHDLSQLFEWMQQTGKTNVSSYSSYIKFMGRGLNPLKALEIYNNIQEVSTKNNVFICNSVLNCLVRNGKFDTSVKLFQQMKNDGLCPDTVTYSTML
        ML+RW DLSQLFEWMQ+TGKTN+SSYSSYIKFMGRGLNPLKALE+YNNIQEVS KN++FICNS+LNCLVRNGKFDTSVKLF QMKNDGLCPDTVTYSTML
Subjt:  MLSRWHDLSQLFEWMQQTGKTNVSSYSSYIKFMGRGLNPLKALEIYNNIQEVSTKNNVFICNSVLNCLVRNGKFDTSVKLFQQMKNDGLCPDTVTYSTML

Query:  TGCIKVKHGYSKALELLKELQDNGLCMDSVMYGTLIAVCASHNRLDDAENFFNQMKNDGHSPNMFHYGSLLNAYSMSGDYKKADELIQDMKLTGLVPNKV
        TGCI+VKHGY+KA+ELLKELQDNGLCMD V+YGTLIA+CASHNRL+DAE+FFNQM+ +GHSPNMFHYGSLLNAYS++GDYKKADELI+DMKLTGLVPNK 
Subjt:  TGCIKVKHGYSKALELLKELQDNGLCMDSVMYGTLIAVCASHNRLDDAENFFNQMKNDGHSPNMFHYGSLLNAYSMSGDYKKADELIQDMKLTGLVPNKV

Query:  CFLVYDALETIVFFFLVSSILQKLAHGAFHVRKGVFVPFKPNHPKNSNAGQEGGFLVWNTISCNFLTYNGKLGSYLENNILLVFKFSIYLQVILTTLLKV
                                                                                                   VILTTLLKV
Subjt:  CFLVYDALETIVFFFLVSSILQKLAHGAFHVRKGVFVPFKPNHPKNSNAGQEGGFLVWNTISCNFLTYNGKLGSYLENNILLVFKFSIYLQVILTTLLKV

Query:  YVRGGLFEKSRKLLSELEALGYGENEV
        YVRGGLFEKSRKLLSELE+LGYGENE+
Subjt:  YVRGGLFEKSRKLLSELEALGYGENEV

XP_022156960.1 pentatricopeptide repeat-containing protein At1g10910, chloroplastic [Momordica charantia]4.9e-11066.97Show/hide
Query:  MLSRWHDLSQLFEWMQQTGKTNVSSYSSYIKFMGRGLNPLKALEIYNNIQEVSTKNNVFICNSVLNCLVRNGKFDTSVKLFQQMKNDGLCPDTVTYSTML
        MLSRW DLSQLFEWMQQTGKTNVSSYSSYIKF+GR LNPLKALEIYNNIQEVSTKNNVFICNSVLNCLVRNGKFDTSVKLF QMKNDGLCPDTVTYSTML
Subjt:  MLSRWHDLSQLFEWMQQTGKTNVSSYSSYIKFMGRGLNPLKALEIYNNIQEVSTKNNVFICNSVLNCLVRNGKFDTSVKLFQQMKNDGLCPDTVTYSTML

Query:  TGCIKVKHGYSKALELLKELQDNGLCMDSVMYGTLIAVCASHNRLDDAENFFNQMKNDGHSPNMFHYGSLLNAYSMSGDYKKADELIQDMKLTGLVPNKV
        TGCIKVKHGY+KALELLKELQ NGLCMDSV+YGTLIAVCASHNRL+DAE+FF QMKN+GHSPNMFHYGSLLNAYS SGDYKKADELIQDMKLTGLVPNK 
Subjt:  TGCIKVKHGYSKALELLKELQDNGLCMDSVMYGTLIAVCASHNRLDDAENFFNQMKNDGHSPNMFHYGSLLNAYSMSGDYKKADELIQDMKLTGLVPNKV

Query:  CFLVYDALETIVFFFLVSSILQKLAHGAFHVRKGVFVPFKPNHPKNSNAGQEGGFLVWNTISCNFLTYNGKLGSYLENNILLVFKFSIYLQVILTTLLKV
                                                                                                   V+LTTLLKV
Subjt:  CFLVYDALETIVFFFLVSSILQKLAHGAFHVRKGVFVPFKPNHPKNSNAGQEGGFLVWNTISCNFLTYNGKLGSYLENNILLVFKFSIYLQVILTTLLKV

Query:  YVRGGLFEKSRKLLSELEALGYGENEV
        YVRGGLFEKS+KLLS+LEALGYGENE+
Subjt:  YVRGGLFEKSRKLLSELEALGYGENEV

XP_022930554.1 pentatricopeptide repeat-containing protein At1g10910, chloroplastic [Cucurbita moschata]4.1e-10966.06Show/hide
Query:  MLSRWHDLSQLFEWMQQTGKTNVSSYSSYIKFMGRGLNPLKALEIYNNIQEVSTKNNVFICNSVLNCLVRNGKFDTSVKLFQQMKNDGLCPDTVTYSTML
        M SRW DLSQLFEWMQQTGKTNVSSYSSYIKFMGRGLNPLKALEIYNNIQEVS KNN++ICNS+LNCLVRNGKFDTSVKLF QMKNDGLCPDTVTYSTML
Subjt:  MLSRWHDLSQLFEWMQQTGKTNVSSYSSYIKFMGRGLNPLKALEIYNNIQEVSTKNNVFICNSVLNCLVRNGKFDTSVKLFQQMKNDGLCPDTVTYSTML

Query:  TGCIKVKHGYSKALELLKELQDNGLCMDSVMYGTLIAVCASHNRLDDAENFFNQMKNDGHSPNMFHYGSLLNAYSMSGDYKKADELIQDMKLTGLVPNKV
        TGCIKV+HGY+KALELLKE Q+NGLCMDSV YGTLIAVCASHNRL+DAE+FFNQMKN+G+SPNMFHYGSLLNAYSMSGDYKKADELI+DMKL GLVPNK 
Subjt:  TGCIKVKHGYSKALELLKELQDNGLCMDSVMYGTLIAVCASHNRLDDAENFFNQMKNDGHSPNMFHYGSLLNAYSMSGDYKKADELIQDMKLTGLVPNKV

Query:  CFLVYDALETIVFFFLVSSILQKLAHGAFHVRKGVFVPFKPNHPKNSNAGQEGGFLVWNTISCNFLTYNGKLGSYLENNILLVFKFSIYLQVILTTLLKV
                                                                                                   VILTTLLKV
Subjt:  CFLVYDALETIVFFFLVSSILQKLAHGAFHVRKGVFVPFKPNHPKNSNAGQEGGFLVWNTISCNFLTYNGKLGSYLENNILLVFKFSIYLQVILTTLLKV

Query:  YVRGGLFEKSRKLLSELEALGYGENEV
        YVRGGLFEKSRKLLSELEALGYGENE+
Subjt:  YVRGGLFEKSRKLLSELEALGYGENEV

XP_023528492.1 pentatricopeptide repeat-containing protein At1g10910, chloroplastic [Cucurbita pepo subsp. pepo]4.1e-10966.06Show/hide
Query:  MLSRWHDLSQLFEWMQQTGKTNVSSYSSYIKFMGRGLNPLKALEIYNNIQEVSTKNNVFICNSVLNCLVRNGKFDTSVKLFQQMKNDGLCPDTVTYSTML
        M SRW DLSQLFEWMQQTGKTNVSSYSSYIKFMGRGLNPLKALEIYNNIQEVS KNN++ICNS+LNCLVRNGKFDTSVKLF QMKNDGLCPDTVTYSTML
Subjt:  MLSRWHDLSQLFEWMQQTGKTNVSSYSSYIKFMGRGLNPLKALEIYNNIQEVSTKNNVFICNSVLNCLVRNGKFDTSVKLFQQMKNDGLCPDTVTYSTML

Query:  TGCIKVKHGYSKALELLKELQDNGLCMDSVMYGTLIAVCASHNRLDDAENFFNQMKNDGHSPNMFHYGSLLNAYSMSGDYKKADELIQDMKLTGLVPNKV
        TGCIKV+HGY+KALELLKE Q+NGLCMDSV YGTLIAVCASHNRL+DAE+FFNQMKN+G+SPNMFHYGSLLNAYSMSGDYKKADELI+DMKL GLVPNK 
Subjt:  TGCIKVKHGYSKALELLKELQDNGLCMDSVMYGTLIAVCASHNRLDDAENFFNQMKNDGHSPNMFHYGSLLNAYSMSGDYKKADELIQDMKLTGLVPNKV

Query:  CFLVYDALETIVFFFLVSSILQKLAHGAFHVRKGVFVPFKPNHPKNSNAGQEGGFLVWNTISCNFLTYNGKLGSYLENNILLVFKFSIYLQVILTTLLKV
                                                                                                   VILTTLLKV
Subjt:  CFLVYDALETIVFFFLVSSILQKLAHGAFHVRKGVFVPFKPNHPKNSNAGQEGGFLVWNTISCNFLTYNGKLGSYLENNILLVFKFSIYLQVILTTLLKV

Query:  YVRGGLFEKSRKLLSELEALGYGENEV
        YVRGGLFEKSRKLLSELEALGYGENE+
Subjt:  YVRGGLFEKSRKLLSELEALGYGENEV

XP_038903773.1 pentatricopeptide repeat-containing protein At1g10910, chloroplastic isoform X1 [Benincasa hispida]4.1e-10965.75Show/hide
Query:  MLSRWHDLSQLFEWMQQTGKTNVSSYSSYIKFMGRGLNPLKALEIYNNIQEVSTKNNVFICNSVLNCLVRNGKFDTSVKLFQQMKNDGLCPDTVTYSTML
        MLSRW DLSQLFEWMQQTGKTNVSSYSSYIKFMGRGLNPLKALE+YNNIQEVS KNN+FICNS+LNCLVRNGKFDTSVKLF QMKNDGLCPDTVTYSTML
Subjt:  MLSRWHDLSQLFEWMQQTGKTNVSSYSSYIKFMGRGLNPLKALEIYNNIQEVSTKNNVFICNSVLNCLVRNGKFDTSVKLFQQMKNDGLCPDTVTYSTML

Query:  TGCIKVKHGYSKALELLKELQDNGLCMDSVMYGTLIAVCASHNRLDDAENFFNQMKNDGHSPNMFHYGSLLNAYSMSGDYKKADELIQDMKLTGLVPNKV
        TGCI+VKHGY+KALELLKELQDNGL MD V YGTLIA+CASH+RL+DAE+FFNQM+ +GHSPNMFHYGSLLNAYSMSGDYKKADELI+DMKLTGLVPNK 
Subjt:  TGCIKVKHGYSKALELLKELQDNGLCMDSVMYGTLIAVCASHNRLDDAENFFNQMKNDGHSPNMFHYGSLLNAYSMSGDYKKADELIQDMKLTGLVPNKV

Query:  CFLVYDALETIVFFFLVSSILQKLAHGAFHVRKGVFVPFKPNHPKNSNAGQEGGFLVWNTISCNFLTYNGKLGSYLENNILLVFKFSIYLQVILTTLLKV
                                                                                                   VILTTLLKV
Subjt:  CFLVYDALETIVFFFLVSSILQKLAHGAFHVRKGVFVPFKPNHPKNSNAGQEGGFLVWNTISCNFLTYNGKLGSYLENNILLVFKFSIYLQVILTTLLKV

Query:  YVRGGLFEKSRKLLSELEALGYGENEV
        YVRGGLFEKSRKLLSELEALGYGENE+
Subjt:  YVRGGLFEKSRKLLSELEALGYGENEV

TrEMBL top hitse value%identityAlignment
A0A1S3CMQ2 pentatricopeptide repeat-containing protein At1g10910, chloroplastic isoform X21.3e-10863.91Show/hide
Query:  MLSRWHDLSQLFEWMQQTGKTNVSSYSSYIKFMGRGLNPLKALEIYNNIQEVSTKNNVFICNSVLNCLVRNGKFDTSVKLFQQMKNDGLCPDTVTYSTML
        ML+RW DLSQLFEWMQ+TGKTN+SSYSSYIKFMGRGLNPLKALE+YNNIQEVS KN++FICNS+LNCLVRNGKFDTSVKLF QMKNDGLCPDTVTYSTML
Subjt:  MLSRWHDLSQLFEWMQQTGKTNVSSYSSYIKFMGRGLNPLKALEIYNNIQEVSTKNNVFICNSVLNCLVRNGKFDTSVKLFQQMKNDGLCPDTVTYSTML

Query:  TGCIKVKHGYSKALELLKELQDNGLCMDSVMYGTLIAVCASHNRLDDAENFFNQMKNDGHSPNMFHYGSLLNAYSMSGDYKKADELIQDMKLTGLVPNKV
        TGCI+VKHGY+KA+ELLKELQDNGLCMD V+YGTLIA+CASHNRL+DAE+FFNQM+ +GHSPNMFHYGSLLNAYS++GDYKKADELI+DMKLTGLVPNK 
Subjt:  TGCIKVKHGYSKALELLKELQDNGLCMDSVMYGTLIAVCASHNRLDDAENFFNQMKNDGHSPNMFHYGSLLNAYSMSGDYKKADELIQDMKLTGLVPNKV

Query:  CFLVYDALETIVFFFLVSSILQKLAHGAFHVRKGVFVPFKPNHPKNSNAGQEGGFLVWNTISCNFLTYNGKLGSYLENNILLVFKFSIYLQVILTTLLKV
                                                                                                   VILTTLLKV
Subjt:  CFLVYDALETIVFFFLVSSILQKLAHGAFHVRKGVFVPFKPNHPKNSNAGQEGGFLVWNTISCNFLTYNGKLGSYLENNILLVFKFSIYLQVILTTLLKV

Query:  YVRGGLFEKSRKLLSELEALGYGENEV
        YVRGGLFEKSRKLLSELE+LGYGENE+
Subjt:  YVRGGLFEKSRKLLSELEALGYGENEV

A0A1S3CN74 pentatricopeptide repeat-containing protein At1g10910, chloroplastic isoform X11.3e-10863.91Show/hide
Query:  MLSRWHDLSQLFEWMQQTGKTNVSSYSSYIKFMGRGLNPLKALEIYNNIQEVSTKNNVFICNSVLNCLVRNGKFDTSVKLFQQMKNDGLCPDTVTYSTML
        ML+RW DLSQLFEWMQ+TGKTN+SSYSSYIKFMGRGLNPLKALE+YNNIQEVS KN++FICNS+LNCLVRNGKFDTSVKLF QMKNDGLCPDTVTYSTML
Subjt:  MLSRWHDLSQLFEWMQQTGKTNVSSYSSYIKFMGRGLNPLKALEIYNNIQEVSTKNNVFICNSVLNCLVRNGKFDTSVKLFQQMKNDGLCPDTVTYSTML

Query:  TGCIKVKHGYSKALELLKELQDNGLCMDSVMYGTLIAVCASHNRLDDAENFFNQMKNDGHSPNMFHYGSLLNAYSMSGDYKKADELIQDMKLTGLVPNKV
        TGCI+VKHGY+KA+ELLKELQDNGLCMD V+YGTLIA+CASHNRL+DAE+FFNQM+ +GHSPNMFHYGSLLNAYS++GDYKKADELI+DMKLTGLVPNK 
Subjt:  TGCIKVKHGYSKALELLKELQDNGLCMDSVMYGTLIAVCASHNRLDDAENFFNQMKNDGHSPNMFHYGSLLNAYSMSGDYKKADELIQDMKLTGLVPNKV

Query:  CFLVYDALETIVFFFLVSSILQKLAHGAFHVRKGVFVPFKPNHPKNSNAGQEGGFLVWNTISCNFLTYNGKLGSYLENNILLVFKFSIYLQVILTTLLKV
                                                                                                   VILTTLLKV
Subjt:  CFLVYDALETIVFFFLVSSILQKLAHGAFHVRKGVFVPFKPNHPKNSNAGQEGGFLVWNTISCNFLTYNGKLGSYLENNILLVFKFSIYLQVILTTLLKV

Query:  YVRGGLFEKSRKLLSELEALGYGENEV
        YVRGGLFEKSRKLLSELE+LGYGENE+
Subjt:  YVRGGLFEKSRKLLSELEALGYGENEV

A0A6J1DRU4 pentatricopeptide repeat-containing protein At1g10910, chloroplastic2.4e-11066.97Show/hide
Query:  MLSRWHDLSQLFEWMQQTGKTNVSSYSSYIKFMGRGLNPLKALEIYNNIQEVSTKNNVFICNSVLNCLVRNGKFDTSVKLFQQMKNDGLCPDTVTYSTML
        MLSRW DLSQLFEWMQQTGKTNVSSYSSYIKF+GR LNPLKALEIYNNIQEVSTKNNVFICNSVLNCLVRNGKFDTSVKLF QMKNDGLCPDTVTYSTML
Subjt:  MLSRWHDLSQLFEWMQQTGKTNVSSYSSYIKFMGRGLNPLKALEIYNNIQEVSTKNNVFICNSVLNCLVRNGKFDTSVKLFQQMKNDGLCPDTVTYSTML

Query:  TGCIKVKHGYSKALELLKELQDNGLCMDSVMYGTLIAVCASHNRLDDAENFFNQMKNDGHSPNMFHYGSLLNAYSMSGDYKKADELIQDMKLTGLVPNKV
        TGCIKVKHGY+KALELLKELQ NGLCMDSV+YGTLIAVCASHNRL+DAE+FF QMKN+GHSPNMFHYGSLLNAYS SGDYKKADELIQDMKLTGLVPNK 
Subjt:  TGCIKVKHGYSKALELLKELQDNGLCMDSVMYGTLIAVCASHNRLDDAENFFNQMKNDGHSPNMFHYGSLLNAYSMSGDYKKADELIQDMKLTGLVPNKV

Query:  CFLVYDALETIVFFFLVSSILQKLAHGAFHVRKGVFVPFKPNHPKNSNAGQEGGFLVWNTISCNFLTYNGKLGSYLENNILLVFKFSIYLQVILTTLLKV
                                                                                                   V+LTTLLKV
Subjt:  CFLVYDALETIVFFFLVSSILQKLAHGAFHVRKGVFVPFKPNHPKNSNAGQEGGFLVWNTISCNFLTYNGKLGSYLENNILLVFKFSIYLQVILTTLLKV

Query:  YVRGGLFEKSRKLLSELEALGYGENEV
        YVRGGLFEKS+KLLS+LEALGYGENE+
Subjt:  YVRGGLFEKSRKLLSELEALGYGENEV

A0A6J1ERS3 pentatricopeptide repeat-containing protein At1g10910, chloroplastic2.0e-10966.06Show/hide
Query:  MLSRWHDLSQLFEWMQQTGKTNVSSYSSYIKFMGRGLNPLKALEIYNNIQEVSTKNNVFICNSVLNCLVRNGKFDTSVKLFQQMKNDGLCPDTVTYSTML
        M SRW DLSQLFEWMQQTGKTNVSSYSSYIKFMGRGLNPLKALEIYNNIQEVS KNN++ICNS+LNCLVRNGKFDTSVKLF QMKNDGLCPDTVTYSTML
Subjt:  MLSRWHDLSQLFEWMQQTGKTNVSSYSSYIKFMGRGLNPLKALEIYNNIQEVSTKNNVFICNSVLNCLVRNGKFDTSVKLFQQMKNDGLCPDTVTYSTML

Query:  TGCIKVKHGYSKALELLKELQDNGLCMDSVMYGTLIAVCASHNRLDDAENFFNQMKNDGHSPNMFHYGSLLNAYSMSGDYKKADELIQDMKLTGLVPNKV
        TGCIKV+HGY+KALELLKE Q+NGLCMDSV YGTLIAVCASHNRL+DAE+FFNQMKN+G+SPNMFHYGSLLNAYSMSGDYKKADELI+DMKL GLVPNK 
Subjt:  TGCIKVKHGYSKALELLKELQDNGLCMDSVMYGTLIAVCASHNRLDDAENFFNQMKNDGHSPNMFHYGSLLNAYSMSGDYKKADELIQDMKLTGLVPNKV

Query:  CFLVYDALETIVFFFLVSSILQKLAHGAFHVRKGVFVPFKPNHPKNSNAGQEGGFLVWNTISCNFLTYNGKLGSYLENNILLVFKFSIYLQVILTTLLKV
                                                                                                   VILTTLLKV
Subjt:  CFLVYDALETIVFFFLVSSILQKLAHGAFHVRKGVFVPFKPNHPKNSNAGQEGGFLVWNTISCNFLTYNGKLGSYLENNILLVFKFSIYLQVILTTLLKV

Query:  YVRGGLFEKSRKLLSELEALGYGENEV
        YVRGGLFEKSRKLLSELEALGYGENE+
Subjt:  YVRGGLFEKSRKLLSELEALGYGENEV

A0A6J1IWQ9 pentatricopeptide repeat-containing protein At1g10910, chloroplastic2.2e-10865.44Show/hide
Query:  MLSRWHDLSQLFEWMQQTGKTNVSSYSSYIKFMGRGLNPLKALEIYNNIQEVSTKNNVFICNSVLNCLVRNGKFDTSVKLFQQMKNDGLCPDTVTYSTML
        M SRW DLSQLFEWMQQTGKTNVSSYSSYIKFMGRGLNPLKALEIYNNIQEVS KNN++ICNS+LNCLVRNGKFDTSVKLF QMKNDGLCPDTVTYSTML
Subjt:  MLSRWHDLSQLFEWMQQTGKTNVSSYSSYIKFMGRGLNPLKALEIYNNIQEVSTKNNVFICNSVLNCLVRNGKFDTSVKLFQQMKNDGLCPDTVTYSTML

Query:  TGCIKVKHGYSKALELLKELQDNGLCMDSVMYGTLIAVCASHNRLDDAENFFNQMKNDGHSPNMFHYGSLLNAYSMSGDYKKADELIQDMKLTGLVPNKV
        TGCIKV+HGY+KALELLKELQ+NGLCMD V YGTLIAVCASHNRL++AE+FFNQMKN+G+SPNMFHYGSLLNAYSMSGDYKKADELI+DMKL GLVPNK 
Subjt:  TGCIKVKHGYSKALELLKELQDNGLCMDSVMYGTLIAVCASHNRLDDAENFFNQMKNDGHSPNMFHYGSLLNAYSMSGDYKKADELIQDMKLTGLVPNKV

Query:  CFLVYDALETIVFFFLVSSILQKLAHGAFHVRKGVFVPFKPNHPKNSNAGQEGGFLVWNTISCNFLTYNGKLGSYLENNILLVFKFSIYLQVILTTLLKV
                                                                                                   VILTTLLKV
Subjt:  CFLVYDALETIVFFFLVSSILQKLAHGAFHVRKGVFVPFKPNHPKNSNAGQEGGFLVWNTISCNFLTYNGKLGSYLENNILLVFKFSIYLQVILTTLLKV

Query:  YVRGGLFEKSRKLLSELEALGYGENEV
        YVRGGLFEKSRKLLSELEALG+GENE+
Subjt:  YVRGGLFEKSRKLLSELEALGYGENEV

SwissProt top hitse value%identityAlignment
Q0WVV0 Pentatricopeptide repeat-containing protein At1g10910, chloroplastic3.1e-7547.84Show/hide
Query:  RWHDLSQLFEWMQQTGKTNVSSYSSYIKFMGRGLNPLKALEIYNNIQEVSTKNNVFICNSVLNCLVRNGKFDTSVKLFQQMKNDGLCPDTVTYSTMLTGC
        RW DL QLFEWMQQ GK +VS+YSS IKF+G   N  KALEIY +I + STK NV+ICNS+L+CLV+NGK D+ +KLF QMK DGL PD VTY+T+L GC
Subjt:  RWHDLSQLFEWMQQTGKTNVSSYSSYIKFMGRGLNPLKALEIYNNIQEVSTKNNVFICNSVLNCLVRNGKFDTSVKLFQQMKNDGLCPDTVTYSTMLTGC

Query:  IKVKHGYSKALELLKELQDNGLCMDSVMYGTLIAVCASHNRLDDAENFFNQMKNDGHSPNMFHYGSLLNAYSMSGDYKKADELIQDMKLTGLVPNKVCFL
        IKVK+GY KA+EL+ EL  NG+ MDSVMYGT++A+CAS+ R ++AENF  QMK +GHSPN++HY SLLN+YS  GDYKKADEL+ +MK  GLVPNK    
Subjt:  IKVKHGYSKALELLKELQDNGLCMDSVMYGTLIAVCASHNRLDDAENFFNQMKNDGHSPNMFHYGSLLNAYSMSGDYKKADELIQDMKLTGLVPNKVCFL

Query:  VYDALETIVFFFLVSSILQKLAHGAFHVRKGVFVPFKPNHPKNSNAGQEGGFLVWNTISCNFLTYNGKLGSYLENNILLVFKFSIYLQVILTTLLKVYVR
                                                                                                V++TTLLKVY++
Subjt:  VYDALETIVFFFLVSSILQKLAHGAFHVRKGVFVPFKPNHPKNSNAGQEGGFLVWNTISCNFLTYNGKLGSYLENNILLVFKFSIYLQVILTTLLKVYVR

Query:  GGLFEKSRKLLSELEALGYGENEV
        GGLF++SR+LLSELE+ GY ENE+
Subjt:  GGLFEKSRKLLSELEALGYGENEV

Q8RWS8 Pentatricopeptide repeat-containing protein At2g417205.0e-1725.52Show/hide
Query:  QLFEWMQQTG-KTNVSSYSSYIKFMGRGLNPLKALEIYNNIQEVSTKNNVFICNSVLNCLVRNGKFDTSVKLFQQMKNDGLCPDTVTYSTMLTGCIKVKH
        ++F  M+Q G K NV S  + +    R    +    + +  Q      N    NS +   +   + + ++ L+Q M+   +  D+VT++ +++G  ++  
Subjt:  QLFEWMQQTG-KTNVSSYSSYIKFMGRGLNPLKALEIYNNIQEVSTKNNVFICNSVLNCLVRNGKFDTSVKLFQQMKNDGLCPDTVTYSTMLTGCIKVKH

Query:  GYSKALELLKELQDNGLCMDSVMYGTLIAVCASHNRLDDAENFFNQMKNDGHSPNMFHYGSLLNAYSMSGDYKKADELIQDMKLTGLVPNKV
         Y +A+  LKE++D  + +   +Y +++   +   ++ +AE+ FNQMK  G  P++  Y S+L+AY+ S  + KA EL  +M+  G+ P+ +
Subjt:  GYSKALELLKELQDNGLCMDSVMYGTLIAVCASHNRLDDAENFFNQMKNDGHSPNMFHYGSLLNAYSMSGDYKKADELIQDMKLTGLVPNKV

Q9LFF1 Pentatricopeptide repeat-containing protein At3g53700, chloroplastic1.0e-1728.18Show/hide
Query:  NVSSYSSYIKFMGRGLNPLKALEIYNNIQEVSTKNNVFICNSVLNCLVRNGKFDTSVKLFQQMKNDGLCPDTVTYSTMLTGCIKVKHGYSKALELLKELQ
        +V +++S I+ +    N   A+E++  ++    + + F  N +++ L   GK D ++ + +QM+  G     +TY+T++ G  K  +   +A E+  E++
Subjt:  NVSSYSSYIKFMGRGLNPLKALEIYNNIQEVSTKNNVFICNSVLNCLVRNGKFDTSVKLFQQMKNDGLCPDTVTYSTMLTGCIKVKHGYSKALELLKELQ

Query:  DNGLCMDSVMYGTLIAVCASHNRLDDAENFFNQMKNDGHSPNMFHYGSLLNAYSMSGDYKKADELIQDMKLTGLVPNKVCF
         +G+  +SV Y TLI       R++DA    +QM  +G  P+ + Y SLL  +   GD KKA +++Q M   G  P+ V +
Subjt:  DNGLCMDSVMYGTLIAVCASHNRLDDAENFFNQMKNDGHSPNMFHYGSLLNAYSMSGDYKKADELIQDMKLTGLVPNKVCF

Q9S7Q2 Pentatricopeptide repeat-containing protein At1g74850, chloroplastic4.9e-2028.57Show/hide
Query:  WHDLSQLFEWMQQT--GKTNVSSYSSYIKFMGRGLNPLKALEIYNNIQEVSTKNNVFICNSVLNCLVRNGKFDTSVKLFQQMKNDGLCPDTVTYSTMLTG
        W    +LF++MQ+    K N   Y+  I  +GR     K LE+++ +       +VF   +++N   RNG+++TS++L  +MKN+ + P  +TY+T++  
Subjt:  WHDLSQLFEWMQQT--GKTNVSSYSSYIKFMGRGLNPLKALEIYNNIQEVSTKNNVFICNSVLNCLVRNGKFDTSVKLFQQMKNDGLCPDTVTYSTMLTG

Query:  CIKVKHGYSKALELLKELQDNGLCMDSVMYGTLIAVCASHNRLDDAENFFNQMKNDGHSPNMFHYGSLLNAYSMSGDYKKADELIQDMKLTGLVPN
        C +    +   L L  E++  G+  D V Y TL++ CA     D+AE  F  M + G  P++  Y  L+  +      +K  +L+ +M   G +P+
Subjt:  CIKVKHGYSKALELLKELQDNGLCMDSVMYGTLIAVCASHNRLDDAENFFNQMKNDGHSPNMFHYGSLLNAYSMSGDYKKADELIQDMKLTGLVPN

Q9SIC9 Pentatricopeptide repeat-containing protein At2g31400, chloroplastic8.6e-1728.64Show/hide
Query:  WHDLSQLFEWM-QQTGKTNVSSYSSYIKFMGRGLNPLKALEIYNNIQEVSTKNNVFICNSVLNCLVRNGKFDTSVKLFQQMKNDGLCPDTVTYSTMLTGC
        W     LF+ M  +  + +V SY++ +  + +G     A EI   +       NV   ++V++   + G+FD ++ LF +M+  G+  D V+Y+T+L+  
Subjt:  WHDLSQLFEWM-QQTGKTNVSSYSSYIKFMGRGLNPLKALEIYNNIQEVSTKNNVFICNSVLNCLVRNGKFDTSVKLFQQMKNDGLCPDTVTYSTMLTGC

Query:  IKVKHGYSKALELLKELQDNGLCMDSVMYGTLIAVCASHNRLDDAENFFNQMKNDGHSPNMFHYGSLLNAYSMSGDYKKADELIQDMKLTGLVPNKVCF-
         KV     +AL++L+E+   G+  D V Y  L+       + D+ +  F +MK +   PN+  Y +L++ YS  G YK+A E+ ++ K  GL  + V + 
Subjt:  IKVKHGYSKALELLKELQDNGLCMDSVMYGTLIAVCASHNRLDDAENFFNQMKNDGHSPNMFHYGSLLNAYSMSGDYKKADELIQDMKLTGLVPNKVCF-

Query:  LVYDAL
         + DAL
Subjt:  LVYDAL

Arabidopsis top hitse value%identityAlignment
AT1G10910.1 Pentatricopeptide repeat (PPR) superfamily protein2.2e-7647.84Show/hide
Query:  RWHDLSQLFEWMQQTGKTNVSSYSSYIKFMGRGLNPLKALEIYNNIQEVSTKNNVFICNSVLNCLVRNGKFDTSVKLFQQMKNDGLCPDTVTYSTMLTGC
        RW DL QLFEWMQQ GK +VS+YSS IKF+G   N  KALEIY +I + STK NV+ICNS+L+CLV+NGK D+ +KLF QMK DGL PD VTY+T+L GC
Subjt:  RWHDLSQLFEWMQQTGKTNVSSYSSYIKFMGRGLNPLKALEIYNNIQEVSTKNNVFICNSVLNCLVRNGKFDTSVKLFQQMKNDGLCPDTVTYSTMLTGC

Query:  IKVKHGYSKALELLKELQDNGLCMDSVMYGTLIAVCASHNRLDDAENFFNQMKNDGHSPNMFHYGSLLNAYSMSGDYKKADELIQDMKLTGLVPNKVCFL
        IKVK+GY KA+EL+ EL  NG+ MDSVMYGT++A+CAS+ R ++AENF  QMK +GHSPN++HY SLLN+YS  GDYKKADEL+ +MK  GLVPNK    
Subjt:  IKVKHGYSKALELLKELQDNGLCMDSVMYGTLIAVCASHNRLDDAENFFNQMKNDGHSPNMFHYGSLLNAYSMSGDYKKADELIQDMKLTGLVPNKVCFL

Query:  VYDALETIVFFFLVSSILQKLAHGAFHVRKGVFVPFKPNHPKNSNAGQEGGFLVWNTISCNFLTYNGKLGSYLENNILLVFKFSIYLQVILTTLLKVYVR
                                                                                                V++TTLLKVY++
Subjt:  VYDALETIVFFFLVSSILQKLAHGAFHVRKGVFVPFKPNHPKNSNAGQEGGFLVWNTISCNFLTYNGKLGSYLENNILLVFKFSIYLQVILTTLLKVYVR

Query:  GGLFEKSRKLLSELEALGYGENEV
        GGLF++SR+LLSELE+ GY ENE+
Subjt:  GGLFEKSRKLLSELEALGYGENEV

AT1G74850.1 plastid transcriptionally active 23.5e-2128.57Show/hide
Query:  WHDLSQLFEWMQQT--GKTNVSSYSSYIKFMGRGLNPLKALEIYNNIQEVSTKNNVFICNSVLNCLVRNGKFDTSVKLFQQMKNDGLCPDTVTYSTMLTG
        W    +LF++MQ+    K N   Y+  I  +GR     K LE+++ +       +VF   +++N   RNG+++TS++L  +MKN+ + P  +TY+T++  
Subjt:  WHDLSQLFEWMQQT--GKTNVSSYSSYIKFMGRGLNPLKALEIYNNIQEVSTKNNVFICNSVLNCLVRNGKFDTSVKLFQQMKNDGLCPDTVTYSTMLTG

Query:  CIKVKHGYSKALELLKELQDNGLCMDSVMYGTLIAVCASHNRLDDAENFFNQMKNDGHSPNMFHYGSLLNAYSMSGDYKKADELIQDMKLTGLVPN
        C +    +   L L  E++  G+  D V Y TL++ CA     D+AE  F  M + G  P++  Y  L+  +      +K  +L+ +M   G +P+
Subjt:  CIKVKHGYSKALELLKELQDNGLCMDSVMYGTLIAVCASHNRLDDAENFFNQMKNDGHSPNMFHYGSLLNAYSMSGDYKKADELIQDMKLTGLVPN

AT2G41720.1 Tetratricopeptide repeat (TPR)-like superfamily protein3.6e-1825.52Show/hide
Query:  QLFEWMQQTG-KTNVSSYSSYIKFMGRGLNPLKALEIYNNIQEVSTKNNVFICNSVLNCLVRNGKFDTSVKLFQQMKNDGLCPDTVTYSTMLTGCIKVKH
        ++F  M+Q G K NV S  + +    R    +    + +  Q      N    NS +   +   + + ++ L+Q M+   +  D+VT++ +++G  ++  
Subjt:  QLFEWMQQTG-KTNVSSYSSYIKFMGRGLNPLKALEIYNNIQEVSTKNNVFICNSVLNCLVRNGKFDTSVKLFQQMKNDGLCPDTVTYSTMLTGCIKVKH

Query:  GYSKALELLKELQDNGLCMDSVMYGTLIAVCASHNRLDDAENFFNQMKNDGHSPNMFHYGSLLNAYSMSGDYKKADELIQDMKLTGLVPNKV
         Y +A+  LKE++D  + +   +Y +++   +   ++ +AE+ FNQMK  G  P++  Y S+L+AY+ S  + KA EL  +M+  G+ P+ +
Subjt:  GYSKALELLKELQDNGLCMDSVMYGTLIAVCASHNRLDDAENFFNQMKNDGHSPNMFHYGSLLNAYSMSGDYKKADELIQDMKLTGLVPNKV

AT2G41720.2 Tetratricopeptide repeat (TPR)-like superfamily protein3.6e-1825.52Show/hide
Query:  QLFEWMQQTG-KTNVSSYSSYIKFMGRGLNPLKALEIYNNIQEVSTKNNVFICNSVLNCLVRNGKFDTSVKLFQQMKNDGLCPDTVTYSTMLTGCIKVKH
        ++F  M+Q G K NV S  + +    R    +    + +  Q      N    NS +   +   + + ++ L+Q M+   +  D+VT++ +++G  ++  
Subjt:  QLFEWMQQTG-KTNVSSYSSYIKFMGRGLNPLKALEIYNNIQEVSTKNNVFICNSVLNCLVRNGKFDTSVKLFQQMKNDGLCPDTVTYSTMLTGCIKVKH

Query:  GYSKALELLKELQDNGLCMDSVMYGTLIAVCASHNRLDDAENFFNQMKNDGHSPNMFHYGSLLNAYSMSGDYKKADELIQDMKLTGLVPNKV
         Y +A+  LKE++D  + +   +Y +++   +   ++ +AE+ FNQMK  G  P++  Y S+L+AY+ S  + KA EL  +M+  G+ P+ +
Subjt:  GYSKALELLKELQDNGLCMDSVMYGTLIAVCASHNRLDDAENFFNQMKNDGHSPNMFHYGSLLNAYSMSGDYKKADELIQDMKLTGLVPNKV

AT3G53700.1 Pentatricopeptide repeat (PPR) superfamily protein7.2e-1928.18Show/hide
Query:  NVSSYSSYIKFMGRGLNPLKALEIYNNIQEVSTKNNVFICNSVLNCLVRNGKFDTSVKLFQQMKNDGLCPDTVTYSTMLTGCIKVKHGYSKALELLKELQ
        +V +++S I+ +    N   A+E++  ++    + + F  N +++ L   GK D ++ + +QM+  G     +TY+T++ G  K  +   +A E+  E++
Subjt:  NVSSYSSYIKFMGRGLNPLKALEIYNNIQEVSTKNNVFICNSVLNCLVRNGKFDTSVKLFQQMKNDGLCPDTVTYSTMLTGCIKVKHGYSKALELLKELQ

Query:  DNGLCMDSVMYGTLIAVCASHNRLDDAENFFNQMKNDGHSPNMFHYGSLLNAYSMSGDYKKADELIQDMKLTGLVPNKVCF
         +G+  +SV Y TLI       R++DA    +QM  +G  P+ + Y SLL  +   GD KKA +++Q M   G  P+ V +
Subjt:  DNGLCMDSVMYGTLIAVCASHNRLDDAENFFNQMKNDGHSPNMFHYGSLLNAYSMSGDYKKADELIQDMKLTGLVPNKVCF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAAGTAGGTGGCATGATCTTTCTCAGCTCTTTGAGTGGATGCAGCAGACTGGAAAGACCAATGTTTCTTCTTACAGCAGTTATATAAAGTTCATGGGGAGAGGTCT
TAATCCTTTGAAGGCACTAGAAATATACAATAATATTCAAGAAGTATCAACAAAGAATAATGTTTTTATTTGTAATTCTGTCCTCAATTGTCTCGTGAGAAATGGCAAGT
TTGATACCAGTGTTAAGTTGTTTCAACAAATGAAGAATGATGGTTTATGTCCAGATACAGTTACATACAGCACGATGCTTACTGGTTGCATCAAGGTTAAACATGGTTAT
TCTAAAGCATTGGAGCTTCTTAAGGAGCTGCAAGACAATGGACTATGCATGGATAGTGTAATGTATGGGACACTTATAGCTGTTTGTGCTTCACATAATAGATTGGATGA
TGCTGAGAACTTTTTCAACCAGATGAAAAATGACGGTCATTCACCGAATATGTTCCATTATGGCTCTCTACTCAATGCTTATTCAATGAGTGGAGATTATAAAAAAGCTG
ATGAGCTGATTCAGGATATGAAATTGACCGGGTTAGTACCAAATAAGGTTTGTTTTCTTGTTTATGATGCCTTGGAAACTATAGTATTTTTTTTTTTGGTAAGTAGCATC
CTCCAAAAGCTTGCTCATGGAGCTTTCCACGTCAGAAAAGGTGTGTTTGTTCCTTTCAAGCCAAATCACCCGAAAAATAGCAATGCTGGCCAAGAGGGTGGATTTTTGGT
CTGGAATACTATTTCTTGTAATTTCCTTACTTATAATGGAAAACTTGGTTCGTATCTAGAAAATAATATATTGTTGGTATTCAAGTTTTCTATCTACTTGCAGGTGATTT
TAACAACATTGCTGAAGGTTTATGTCAGGGGAGGCTTGTTTGAGAAATCAAGGAAATTGTTATCAGAATTGGAAGCCCTTGGCTATGGTGAAAATGAGGTATGTACCAAT
GCTCTGTTGAATCTAAATGATACAGTGGCTGAATGTTGGGATGAAACCCAAGTGACTTGGAATTTGGGCATTAGAAGAAGGGTCTTTGAGAGAGAATTGCAAGCTTGGAT
CGGGCTGACTGATAGGTTGGAAGGATTTCGCTTGGGGCAAGAAGCTGACAGAATTGTATGGTCTCTGAACTCGACTAATGAATTCTCCACCAAATCCTTGTTCCTCAGGT
TGGCTGCCTCAAGTCCCTCATTAAGGTGCCCTCTGCCTAAGCTGATTTGGAAATTCAAAGTTCCTAAGAAGGTAATTTTTCTTTTGTGGTCGGTAGCCCATAGAAGTCTT
AATACTCACGAGAGGTTGCAGAATAGATGCCCAAATCTTGCCTTGTGTCCCTCGGCTTGCCCCCTCTGTTTGCAAAATGAAGAATCTTTAGACCACATTCTTTTGCACTG
CCCCTTTGCCAGACAATGCTGGGATAGATTGGTGAGCATCTTTAATATTCAAGTCTGCCTCCCAAGGAAGATAGATGATTGGCTGCTGGAATCTGTGGGTGGGTGGAGGC
TTAGAAGAGAAGAGAGGATCCTATGGATGTGTTGCTTCGAGATCCTTGTTATGGAGCTTGTGATGGAGGGCCTCTTGCGCAAGGTGCCCCCTCAGCGCCTCGCTTCTGGC
GCTAGGCGTAGTGAGGAAGGCGTGGCCAAGGCGCATGCCTTCCCTCAAAGCCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTAAGTAGGTGGCATGATCTTTCTCAGCTCTTTGAGTGGATGCAGCAGACTGGAAAGACCAATGTTTCTTCTTACAGCAGTTATATAAAGTTCATGGGGAGAGGTCT
TAATCCTTTGAAGGCACTAGAAATATACAATAATATTCAAGAAGTATCAACAAAGAATAATGTTTTTATTTGTAATTCTGTCCTCAATTGTCTCGTGAGAAATGGCAAGT
TTGATACCAGTGTTAAGTTGTTTCAACAAATGAAGAATGATGGTTTATGTCCAGATACAGTTACATACAGCACGATGCTTACTGGTTGCATCAAGGTTAAACATGGTTAT
TCTAAAGCATTGGAGCTTCTTAAGGAGCTGCAAGACAATGGACTATGCATGGATAGTGTAATGTATGGGACACTTATAGCTGTTTGTGCTTCACATAATAGATTGGATGA
TGCTGAGAACTTTTTCAACCAGATGAAAAATGACGGTCATTCACCGAATATGTTCCATTATGGCTCTCTACTCAATGCTTATTCAATGAGTGGAGATTATAAAAAAGCTG
ATGAGCTGATTCAGGATATGAAATTGACCGGGTTAGTACCAAATAAGGTTTGTTTTCTTGTTTATGATGCCTTGGAAACTATAGTATTTTTTTTTTTGGTAAGTAGCATC
CTCCAAAAGCTTGCTCATGGAGCTTTCCACGTCAGAAAAGGTGTGTTTGTTCCTTTCAAGCCAAATCACCCGAAAAATAGCAATGCTGGCCAAGAGGGTGGATTTTTGGT
CTGGAATACTATTTCTTGTAATTTCCTTACTTATAATGGAAAACTTGGTTCGTATCTAGAAAATAATATATTGTTGGTATTCAAGTTTTCTATCTACTTGCAGGTGATTT
TAACAACATTGCTGAAGGTTTATGTCAGGGGAGGCTTGTTTGAGAAATCAAGGAAATTGTTATCAGAATTGGAAGCCCTTGGCTATGGTGAAAATGAGGTATGTACCAAT
GCTCTGTTGAATCTAAATGATACAGTGGCTGAATGTTGGGATGAAACCCAAGTGACTTGGAATTTGGGCATTAGAAGAAGGGTCTTTGAGAGAGAATTGCAAGCTTGGAT
CGGGCTGACTGATAGGTTGGAAGGATTTCGCTTGGGGCAAGAAGCTGACAGAATTGTATGGTCTCTGAACTCGACTAATGAATTCTCCACCAAATCCTTGTTCCTCAGGT
TGGCTGCCTCAAGTCCCTCATTAAGGTGCCCTCTGCCTAAGCTGATTTGGAAATTCAAAGTTCCTAAGAAGGTAATTTTTCTTTTGTGGTCGGTAGCCCATAGAAGTCTT
AATACTCACGAGAGGTTGCAGAATAGATGCCCAAATCTTGCCTTGTGTCCCTCGGCTTGCCCCCTCTGTTTGCAAAATGAAGAATCTTTAGACCACATTCTTTTGCACTG
CCCCTTTGCCAGACAATGCTGGGATAGATTGGTGAGCATCTTTAATATTCAAGTCTGCCTCCCAAGGAAGATAGATGATTGGCTGCTGGAATCTGTGGGTGGGTGGAGGC
TTAGAAGAGAAGAGAGGATCCTATGGATGTGTTGCTTCGAGATCCTTGTTATGGAGCTTGTGATGGAGGGCCTCTTGCGCAAGGTGCCCCCTCAGCGCCTCGCTTCTGGC
GCTAGGCGTAGTGAGGAAGGCGTGGCCAAGGCGCATGCCTTCCCTCAAAGCCTTTGA
Protein sequenceShow/hide protein sequence
MLSRWHDLSQLFEWMQQTGKTNVSSYSSYIKFMGRGLNPLKALEIYNNIQEVSTKNNVFICNSVLNCLVRNGKFDTSVKLFQQMKNDGLCPDTVTYSTMLTGCIKVKHGY
SKALELLKELQDNGLCMDSVMYGTLIAVCASHNRLDDAENFFNQMKNDGHSPNMFHYGSLLNAYSMSGDYKKADELIQDMKLTGLVPNKVCFLVYDALETIVFFFLVSSI
LQKLAHGAFHVRKGVFVPFKPNHPKNSNAGQEGGFLVWNTISCNFLTYNGKLGSYLENNILLVFKFSIYLQVILTTLLKVYVRGGLFEKSRKLLSELEALGYGENEVCTN
ALLNLNDTVAECWDETQVTWNLGIRRRVFERELQAWIGLTDRLEGFRLGQEADRIVWSLNSTNEFSTKSLFLRLAASSPSLRCPLPKLIWKFKVPKKVIFLLWSVAHRSL
NTHERLQNRCPNLALCPSACPLCLQNEESLDHILLHCPFARQCWDRLVSIFNIQVCLPRKIDDWLLESVGGWRLRREERILWMCCFEILVMELVMEGLLRKVPPQRLASG
ARRSEEGVAKAHAFPQSL