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Spg006119 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg006119
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionGlycine rich protein
Genome locationscaffold4:5863124..5863991
RNA-Seq ExpressionSpg006119
SyntenySpg006119
Gene Ontology termsNA
InterPro domainsIPR010800 - Glycine rich protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3456034.1 hypothetical protein FNV43_RR00677 [Rhamnella rubrinervis]2.5e-0843.9Show/hide
Query:  MSSKAFAFLGLLFAIVVLISAEAVAVAAARDLAPT-PKNNDVDTM-KMNGAEDGKYGWRGKSLQYFFPRHGNYGVYPDYHGDYSEPGVRIGRCRYGCCGN
        M SKAF FLGLL AIV+LIS+E     +ARDLA T P N +VD + K +G  + +YG         +P  G  G    Y+G     G   G C YGCC  
Subjt:  MSSKAFAFLGLLFAIVVLISAEAVAVAAARDLAPT-PKNNDVDTM-KMNGAEDGKYGWRGKSLQYFFPRHGNYGVYPDYHGDYSEPGVRIGRCRYGCCGN

Query:  RDDRGQCSRCCNGPFGEVVDAKP
              CSRCC+   GE VDA+P
Subjt:  RDDRGQCSRCCNGPFGEVVDAKP

PON48481.1 Glycine rich protein [Parasponia andersonii]2.2e-0742.4Show/hide
Query:  MSSKAFAFLGLLFAIVVLISAEAVAVAAARDLAPTPKNNDVDTMKMNGAEDGKY-GWRGKSLQYFFPRHGNY-GVYPD---YHGDYSEPGVRIGRCRYGC
        M SKAF +LGLL A+V+LIS+E     AA D+A T  +N      +NG  D KY G+ G    Y    HG   G YP      GDY   G   GRC +GC
Subjt:  MSSKAFAFLGLLFAIVVLISAEAVAVAAARDLAPTPKNNDVDTMKMNGAEDGKY-GWRGKSLQYFFPRHGNY-GVYPD---YHGDYSEPGVRIGRCRYGC

Query:  CGNRDDRGQCSRCCNGPFGEVVDAK
        C       +C RCC+   GE V+AK
Subjt:  CGNRDDRGQCSRCCNGPFGEVVDAK

XP_022136252.1 glycine-rich cell wall structural protein-like [Momordica charantia]5.1e-0941.22Show/hide
Query:  MSSKAFAFLGLLFAIVVLISAEAVAVAAARDLAPT---PKNNDVDTMKMNGAEDGKYGWRGKSLQYF------------FPRHGNYGVYPDYHGDYSEPG
        MSSKAFAFLGLLFAIVV+I + AV    A  LAPT     NN+V        ED K+ W G     F            +PR G YG + DY GDY   G
Subjt:  MSSKAFAFLGLLFAIVVLISAEAVAVAAARDLAPT---PKNNDVDTMKMNGAEDGKYGWRGKSLQYF------------FPRHGNYGVYPDYHGDYSEPG

Query:  VRIGRCRY-------GCCGNR----DDRGQCSRCCN-GPFGEVVDAKP
           GR  Y       G CG        RG C RCC   P G + +A+P
Subjt:  VRIGRCRY-------GCCGNR----DDRGQCSRCCN-GPFGEVVDAKP

XP_038886926.1 cold and drought-regulated protein CORA-like isoform X1 [Benincasa hispida]2.2e-0747.27Show/hide
Query:  MSSKAFAFLGLLFAIVVLISAEAVAVAAARDLAPTPKNNDVD-----TMKMNGAEDGKYGWRGKSLQYFFPR---------HGNYGVYPDYHGDYSEPGV
        MSSKAF FLGLL A V+LIS+E     AARDLA T    D D     T++ NG ED KYG  G    Y   R         HG YG    Y G Y   G 
Subjt:  MSSKAFAFLGLLFAIVVLISAEAVAVAAARDLAPTPKNNDVD-----TMKMNGAEDGKYGWRGKSLQYFFPR---------HGNYGVYPDYHGDYSEPGV

Query:  RIGRCRYGCC
        R GRC Y CC
Subjt:  RIGRCRYGCC

XP_038886927.1 cold and drought-regulated protein CORA-like isoform X2 [Benincasa hispida]2.2e-0749.53Show/hide
Query:  MSSKAFAFLGLLFAIVVLISAEAVAVAAARDLAPT--PKNNDVDTMKMNGAEDGKYGWRGKSLQYFFPR---------HGNYGVYPDYHGDYSEPGVRIG
        MSSKAF FLGLL A V+LIS+E     AARDLA T   K+N+V T++ NG ED KYG  G    Y   R         HG YG    Y G Y   G R G
Subjt:  MSSKAFAFLGLLFAIVVLISAEAVAVAAARDLAPT--PKNNDVDTMKMNGAEDGKYGWRGKSLQYFFPR---------HGNYGVYPDYHGDYSEPGVRIG

Query:  RCRYGCC
        RC Y CC
Subjt:  RCRYGCC

TrEMBL top hitse value%identityAlignment
A0A2P5BI59 Glycine rich protein1.0e-0742.4Show/hide
Query:  MSSKAFAFLGLLFAIVVLISAEAVAVAAARDLAPTPKNNDVDTMKMNGAEDGKY-GWRGKSLQYFFPRHGNY-GVYPD---YHGDYSEPGVRIGRCRYGC
        M SKAF +LGLL A+V+LIS+E     AA D+A T  +N      +NG  D KY G+ G    Y    HG   G YP      GDY   G   GRC +GC
Subjt:  MSSKAFAFLGLLFAIVVLISAEAVAVAAARDLAPTPKNNDVDTMKMNGAEDGKY-GWRGKSLQYFFPRHGNY-GVYPD---YHGDYSEPGVRIGRCRYGC

Query:  CGNRDDRGQCSRCCNGPFGEVVDAK
        C       +C RCC+   GE V+AK
Subjt:  CGNRDDRGQCSRCCNGPFGEVVDAK

A0A498J9I5 Uncharacterized protein5.2e-0739.84Show/hide
Query:  MSSKAFAFLGLLFAIVVLISAEAVAVAAARDLAPTPKNNDVDTMKMNGAEDGKYGWRGKSLQYFFPRHGNYGVYPDYHGDYSEP-------GVRIGRCRY
        M SK F + GLL AIV+LIS+E  A AA              T  +NGA D KYG   +      P  G YG  P   G    P       G R GRC Y
Subjt:  MSSKAFAFLGLLFAIVVLISAEAVAVAAARDLAPTPKNNDVDTMKMNGAEDGKYGWRGKSLQYFFPRHGNYGVYPDYHGDYSEP-------GVRIGRCRY

Query:  GCCGNRDDRGQCSRCCNGPFGEVVDAKP
        GCC    +  +C RCCN   G+ VDA+P
Subjt:  GCCGNRDDRGQCSRCCNGPFGEVVDAKP

A0A6J1C524 glycine-rich cell wall structural protein-like2.5e-0941.22Show/hide
Query:  MSSKAFAFLGLLFAIVVLISAEAVAVAAARDLAPT---PKNNDVDTMKMNGAEDGKYGWRGKSLQYF------------FPRHGNYGVYPDYHGDYSEPG
        MSSKAFAFLGLLFAIVV+I + AV    A  LAPT     NN+V        ED K+ W G     F            +PR G YG + DY GDY   G
Subjt:  MSSKAFAFLGLLFAIVVLISAEAVAVAAARDLAPT---PKNNDVDTMKMNGAEDGKYGWRGKSLQYF------------FPRHGNYGVYPDYHGDYSEPG

Query:  VRIGRCRY-------GCCGNR----DDRGQCSRCCN-GPFGEVVDAKP
           GR  Y       G CG        RG C RCC   P G + +A+P
Subjt:  VRIGRCRY-------GCCGNR----DDRGQCSRCCN-GPFGEVVDAKP

A0A6J1HZJ5 glycine-rich protein-like5.2e-0744.36Show/hide
Query:  MSSKAFAFLGLLFAIVVLISAEAVAVAAARDLAPTPKNNDVD-TMKMNGAEDGKYGW--RGKSLQYFFPRHGNYGVYPDY--HGDYSEPGVRIGR-----
        MSSKAF FLGLLFA ++LIS+E     AARDLA T  N + + T++ NG ED KYG    G   +  +   G YG    Y   G Y   G   GR     
Subjt:  MSSKAFAFLGLLFAIVVLISAEAVAVAAARDLAPTPKNNDVD-TMKMNGAEDGKYGW--RGKSLQYFFPRHGNYGVYPDY--HGDYSEPGVRIGR-----

Query:  -CRYGCCGNRDDRGQCSRCCNGPFGEVVD-AKP
         CRYG CG         RCC+   GEVV+ AKP
Subjt:  -CRYGCCGNRDDRGQCSRCCNGPFGEVVD-AKP

A0A6J1JPH5 glycine-rich protein DC7.1-like5.2e-0750.52Show/hide
Query:  MSSKAFAFLGLLFAIVVLISAEAVAVAAARDLAPTP-KNNDVDTMKMNGAEDGKYGWRGKSLQYFFPRHGNYGVYPDYHGDYSEPGVRIGRCRYGCC
        MSSKAF FLGLLFA V+LIS+      AA DLA T  KN +V TM+ NG ED KYG  G    Y   R+ + G     HG Y     R G CRY CC
Subjt:  MSSKAFAFLGLLFAIVVLISAEAVAVAAARDLAPTP-KNNDVDTMKMNGAEDGKYGWRGKSLQYFFPRHGNYGVYPDYHGDYSEPGVRIGRCRYGCC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTCTAAAGCTTTTGCTTTCCTCGGCCTTCTCTTTGCCATTGTCGTTCTCATATCAGCGGAGGCGGTGGCGGTGGCAGCGGCGAGAGACCTCGCTCCGACTCCCAA
GAATAACGATGTGGACACAATGAAGATGAATGGCGCAGAAGATGGCAAGTATGGTTGGAGAGGAAAAAGCCTACAATACTTTTTCCCCAGACATGGAAACTATGGTGTCT
ACCCTGACTACCACGGCGACTACAGTGAACCCGGAGTCCGTATAGGTCGATGCAGGTACGGTTGCTGCGGTAACCGCGACGACCGTGGGCAGTGCAGCCGGTGCTGCAAC
GGCCCTTTCGGAGAAGTTGTGGATGCAAAACCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTCTAAAGCTTTTGCTTTCCTCGGCCTTCTCTTTGCCATTGTCGTTCTCATATCAGCGGAGGCGGTGGCGGTGGCAGCGGCGAGAGACCTCGCTCCGACTCCCAA
GAATAACGATGTGGACACAATGAAGATGAATGGCGCAGAAGATGGCAAGTATGGTTGGAGAGGAAAAAGCCTACAATACTTTTTCCCCAGACATGGAAACTATGGTGTCT
ACCCTGACTACCACGGCGACTACAGTGAACCCGGAGTCCGTATAGGTCGATGCAGGTACGGTTGCTGCGGTAACCGCGACGACCGTGGGCAGTGCAGCCGGTGCTGCAAC
GGCCCTTTCGGAGAAGTTGTGGATGCAAAACCCTAA
Protein sequenceShow/hide protein sequence
MSSKAFAFLGLLFAIVVLISAEAVAVAAARDLAPTPKNNDVDTMKMNGAEDGKYGWRGKSLQYFFPRHGNYGVYPDYHGDYSEPGVRIGRCRYGCCGNRDDRGQCSRCCN
GPFGEVVDAKP