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Spg006138 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg006138
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold4:5481159..5487710
RNA-Seq ExpressionSpg006138
SyntenySpg006138
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGGGTTGGGCCGAGCTCGGCCCAACCCAACCCCTTTGTCTTGTTTCTCCTTCGGGATCCGTCTCTCGACCGTGCCCTAGTGGGATTGGAGGAAACCTTCACCTGAT
TATTGAATTTGACGCCCTGAATGTGATCGATTGTATCAAAGGGAAGACGAAGGACCTCTCGGAAATCAACAATATTTTGGAAGCCATAGTCGCTTTGGCTCCGAAGTTGG
GTGTTACAGTGTTCAAGCACTGTTTTCGCGAGGAGAATCGTATTGCTCACTCGCTCGCCCGTGAGGCTGCCTCCGACGCCGTCGACGATGGTGGTCTCTGTGTTGGGGAT
GGGTCAGTTGTTAGGAGCGATGGTCACGATTCCGGAGGTAAATCGCATACCAGGTACGCGATTCCACAGCTAAATCGCGAACCAGTGATACTTGAACTTGGAAATGGTGG
GGATAGTGATATAGAGGTAGAAGTTGATGAGTTATTTGGAGAAGTTAATGGTGGGGATAGTGATACAGAGGCAGAAGTTAATAACGAAGATGAAGAACCTCCTATAGTTG
ATGATGACACTTCAGCTCTTCCTGTACAGTCACTGGAAGATCAGACAGACATTGCTTCAAGTTCTGGTCATGGTGGCATAACTCAACAAGATATTGATGATGTGATTAAT
CATCAATCACACATGGAAGCGCCTCAACCTCGCGTGGAGCTCATCAGAAAAGACCACCACGCTGTGGCACTTGAGTTTGTATTAATTCCATAA
mRNA sequenceShow/hide mRNA sequence
ATGTGGGGTTGGGCCGAGCTCGGCCCAACCCAACCCCTTTGTCTTGTTTCTCCTTCGGGATCCGTCTCTCGACCGTGCCCTAGTGGGATTGGAGGAAACCTTCACCTGAT
TATTGAATTTGACGCCCTGAATGTGATCGATTGTATCAAAGGGAAGACGAAGGACCTCTCGGAAATCAACAATATTTTGGAAGCCATAGTCGCTTTGGCTCCGAAGTTGG
GTGTTACAGTGTTCAAGCACTGTTTTCGCGAGGAGAATCGTATTGCTCACTCGCTCGCCCGTGAGGCTGCCTCCGACGCCGTCGACGATGGTGGTCTCTGTGTTGGGGAT
GGGTCAGTTGTTAGGAGCGATGGTCACGATTCCGGAGGTAAATCGCATACCAGGTACGCGATTCCACAGCTAAATCGCGAACCAGTGATACTTGAACTTGGAAATGGTGG
GGATAGTGATATAGAGGTAGAAGTTGATGAGTTATTTGGAGAAGTTAATGGTGGGGATAGTGATACAGAGGCAGAAGTTAATAACGAAGATGAAGAACCTCCTATAGTTG
ATGATGACACTTCAGCTCTTCCTGTACAGTCACTGGAAGATCAGACAGACATTGCTTCAAGTTCTGGTCATGGTGGCATAACTCAACAAGATATTGATGATGTGATTAAT
CATCAATCACACATGGAAGCGCCTCAACCTCGCGTGGAGCTCATCAGAAAAGACCACCACGCTGTGGCACTTGAGTTTGTATTAATTCCATAA
Protein sequenceShow/hide protein sequence
MWGWAELGPTQPLCLVSPSGSVSRPCPSGIGGNLHLIIEFDALNVIDCIKGKTKDLSEINNILEAIVALAPKLGVTVFKHCFREENRIAHSLAREAASDAVDDGGLCVGD
GSVVRSDGHDSGGKSHTRYAIPQLNREPVILELGNGGDSDIEVEVDELFGEVNGGDSDTEAEVNNEDEEPPIVDDDTSALPVQSLEDQTDIASSSGHGGITQQDIDDVIN
HQSHMEAPQPRVELIRKDHHAVALEFVLIP