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Spg006179 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg006179
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionprotein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2
Genome locationscaffold4:6056642..6058257
RNA-Seq ExpressionSpg006179
SyntenySpg006179
Gene Ontology termsGO:0000741 - karyogamy (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR033251 - Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial
IPR043459 - NFD6/NOXY2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039497.1 protein NUCLEAR FUSION DEFECTIVE 6 [Cucumis melo var. makuwa]2.1e-3291.21Show/hide
Query:  MASFAARAIFRSSSGSGCKAATLLSAGARAAPARSPFRIASKRPFSHCSARVPVEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSE
        MASFAARAIFRSSSG   KAATLLSAGARAAPARSPFRIASKRPFSH S R+P+EMSFCVESMLPFHSATSSALMTSMLSVS HSYGWLSE
Subjt:  MASFAARAIFRSSSGSGCKAATLLSAGARAAPARSPFRIASKRPFSHCSARVPVEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSE

TYK15251.1 protein NUCLEAR FUSION DEFECTIVE 6 [Cucumis melo var. makuwa]4.3e-3391.3Show/hide
Query:  MASFAARAIFRSSSGSGCKAATLLSAGARAAPARSPFRIASKRPFSHCSARVPVEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEG
        MASFAARAIFRSSSG   KAATLLSAGARAAPARSPFRIASKRPFSH S R+P+EMSFCVESMLPFHSATSSALMTSMLSVS HSYGWLSEG
Subjt:  MASFAARAIFRSSSGSGCKAATLLSAGARAAPARSPFRIASKRPFSHCSARVPVEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEG

XP_008459321.1 PREDICTED: protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 [Cucumis melo]6.2e-3290.11Show/hide
Query:  MASFAARAIFRSSSGSGCKAATLLSAGARAAPARSPFRIASKRPFSHCSARVPVEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSE
        MASFAARAIFRSSSG   K ATLLSAGARAAPARSPFRIASKRPFSH S R+P+EMSFCVESMLPFHSATSSALMTSMLSVS HSYGWLSE
Subjt:  MASFAARAIFRSSSGSGCKAATLLSAGARAAPARSPFRIASKRPFSHCSARVPVEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSE

XP_008459322.1 PREDICTED: protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 [Cucumis melo]6.2e-3290.11Show/hide
Query:  MASFAARAIFRSSSGSGCKAATLLSAGARAAPARSPFRIASKRPFSHCSARVPVEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSE
        MASFAARAIFRSSSG   K ATLLSAGARAAPARSPFRIASKRPFSH S R+P+EMSFCVESMLPFHSATSSALMTSMLSVS HSYGWLSE
Subjt:  MASFAARAIFRSSSGSGCKAATLLSAGARAAPARSPFRIASKRPFSHCSARVPVEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSE

XP_038887457.1 protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial-like isoform X3 [Benincasa hispida]1.6e-3289.13Show/hide
Query:  MASFAARAIFRSSSGSGCKAATLLSAGARAAPARSPFRIASKRPFSHCSARVPVEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEG
        MASFA RAIFRSSSG   KAATLLS GARAAPARSPFRIASKRPFS CS R+PVEMSFCVESMLPFHSATSSALM SMLSVSRH+YGWLSEG
Subjt:  MASFAARAIFRSSSGSGCKAATLLSAGARAAPARSPFRIASKRPFSHCSARVPVEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEG

TrEMBL top hitse value%identityAlignment
A0A0A0KVK4 Uncharacterized protein4.3e-3186.81Show/hide
Query:  MASFAARAIFRSSSGSGCKAATLLSAGARAAPARSPFRIASKRPFSHCSARVPVEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSE
        MASFAAR+IFRSSS    KAATLLSAGARAAPA SPFRIASKRPFSHCS R+P+E+SFCVESMLPFHSATSSALMTSMLSVS HS+GWLSE
Subjt:  MASFAARAIFRSSSGSGCKAATLLSAGARAAPARSPFRIASKRPFSHCSARVPVEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSE

A0A1S3C9E2 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X23.0e-3290.11Show/hide
Query:  MASFAARAIFRSSSGSGCKAATLLSAGARAAPARSPFRIASKRPFSHCSARVPVEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSE
        MASFAARAIFRSSSG   K ATLLSAGARAAPARSPFRIASKRPFSH S R+P+EMSFCVESMLPFHSATSSALMTSMLSVS HSYGWLSE
Subjt:  MASFAARAIFRSSSGSGCKAATLLSAGARAAPARSPFRIASKRPFSHCSARVPVEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSE

A0A1S3CB40 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X13.0e-3290.11Show/hide
Query:  MASFAARAIFRSSSGSGCKAATLLSAGARAAPARSPFRIASKRPFSHCSARVPVEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSE
        MASFAARAIFRSSSG   K ATLLSAGARAAPARSPFRIASKRPFSH S R+P+EMSFCVESMLPFHSATSSALMTSMLSVS HSYGWLSE
Subjt:  MASFAARAIFRSSSGSGCKAATLLSAGARAAPARSPFRIASKRPFSHCSARVPVEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSE

A0A5A7TDD1 Protein NUCLEAR FUSION DEFECTIVE 61.0e-3291.21Show/hide
Query:  MASFAARAIFRSSSGSGCKAATLLSAGARAAPARSPFRIASKRPFSHCSARVPVEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSE
        MASFAARAIFRSSSG   KAATLLSAGARAAPARSPFRIASKRPFSH S R+P+EMSFCVESMLPFHSATSSALMTSMLSVS HSYGWLSE
Subjt:  MASFAARAIFRSSSGSGCKAATLLSAGARAAPARSPFRIASKRPFSHCSARVPVEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSE

A0A5D3CTR8 Protein NUCLEAR FUSION DEFECTIVE 62.1e-3391.3Show/hide
Query:  MASFAARAIFRSSSGSGCKAATLLSAGARAAPARSPFRIASKRPFSHCSARVPVEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEG
        MASFAARAIFRSSSG   KAATLLSAGARAAPARSPFRIASKRPFSH S R+P+EMSFCVESMLPFHSATSSALMTSMLSVS HSYGWLSEG
Subjt:  MASFAARAIFRSSSGSGCKAATLLSAGARAAPARSPFRIASKRPFSHCSARVPVEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEG

SwissProt top hitse value%identityAlignment
Q93ZJ3 Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial1.1e-1048.28Show/hide
Query:  ARAIFRSSSGSGCKAAT-LLSAGARAAPARSPFRIASKRPFSHCSARVPVEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSE
        AR++ R++S     A+T   ++ A++AP    FR  ++R       R PVE+SFCVES+LP+HSAT+SALMTS LS+S  +YGWLS+
Subjt:  ARAIFRSSSGSGCKAAT-LLSAGARAAPARSPFRIASKRPFSHCSARVPVEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSE

Arabidopsis top hitse value%identityAlignment
AT1G28395.1 unknown protein4.0e-1347.78Show/hide
Query:  AARAIFRSSSGSGCKAATLLSAGARAAP--ARSPFRIASKRPFSHCSARVPVEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEG
        AAR++FRS++      A   SAG +  P  AR+ FR+  + P ++   R PVE+S CVE+MLP+H+AT+SAL+ SMLSVSR   GW+ +G
Subjt:  AARAIFRSSSGSGCKAATLLSAGARAAP--ARSPFRIASKRPFSHCSARVPVEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEG

AT1G28395.2 unknown protein4.0e-1347.78Show/hide
Query:  AARAIFRSSSGSGCKAATLLSAGARAAP--ARSPFRIASKRPFSHCSARVPVEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEG
        AAR++FRS++      A   SAG +  P  AR+ FR+  + P ++   R PVE+S CVE+MLP+H+AT+SAL+ SMLSVSR   GW+ +G
Subjt:  AARAIFRSSSGSGCKAATLLSAGARAAP--ARSPFRIASKRPFSHCSARVPVEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEG

AT1G28395.3 unknown protein4.0e-1347.78Show/hide
Query:  AARAIFRSSSGSGCKAATLLSAGARAAP--ARSPFRIASKRPFSHCSARVPVEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEG
        AAR++FRS++      A   SAG +  P  AR+ FR+  + P ++   R PVE+S CVE+MLP+H+AT+SAL+ SMLSVSR   GW+ +G
Subjt:  AARAIFRSSSGSGCKAATLLSAGARAAP--ARSPFRIASKRPFSHCSARVPVEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEG

AT2G20585.2 nuclear fusion defective 61.2e-1247.87Show/hide
Query:  ARAIFRSSSGSGCKAAT-LLSAGARAAPARSPFRIASKRPFSHCSARVPVEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEGDSREDF
        AR++ R++S     A+T   ++ A++AP    FR  ++R       R PVE+SFCVES+LP+HSAT+SALMTS LS+S  +YGWLS+   +EDF
Subjt:  ARAIFRSSSGSGCKAAT-LLSAGARAAPARSPFRIASKRPFSHCSARVPVEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEGDSREDF

AT2G20585.3 nuclear fusion defective 61.2e-1248.86Show/hide
Query:  ARAIFRSSSGSGCKAAT-LLSAGARAAPARSPFRIASKRPFSHCSARVPVEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEG
        AR++ R++S     A+T   ++ A++AP    FR  ++R       R PVE+SFCVES+LP+HSAT+SALMTS LS+S  +YGWLS+G
Subjt:  ARAIFRSSSGSGCKAAT-LLSAGARAAPARSPFRIASKRPFSHCSARVPVEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCTTTGCCGCCAGGGCCATTTTCCGATCCTCCTCCGGCTCAGGTTGCAAGGCTGCCACTCTTCTGAGCGCCGGAGCCAGAGCAGCTCCGGCTCGTTCACCATT
TCGCATTGCTTCTAAACGACCTTTCTCTCATTGTTCTGCAAGGGTTCCAGTTGAAATGAGCTTCTGTGTGGAGTCGATGCTTCCGTTCCATTCTGCTACTTCTTCTGCAT
TGATGACTTCGATGCTTTCTGTTTCTCGACATAGTTATGGCTGGCTTTCAGAAGGGGATTCGAGAGAAGATTTTTATGCAGAGTTCCACATTGTGACAGTGCCCGCTGCT
AAATTAGATGAGCTGATGCACAGGGATTTGGTTTTCCATGTCTTGACTTTCAGTCAAGTTTGCATGTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCTTTGCCGCCAGGGCCATTTTCCGATCCTCCTCCGGCTCAGGTTGCAAGGCTGCCACTCTTCTGAGCGCCGGAGCCAGAGCAGCTCCGGCTCGTTCACCATT
TCGCATTGCTTCTAAACGACCTTTCTCTCATTGTTCTGCAAGGGTTCCAGTTGAAATGAGCTTCTGTGTGGAGTCGATGCTTCCGTTCCATTCTGCTACTTCTTCTGCAT
TGATGACTTCGATGCTTTCTGTTTCTCGACATAGTTATGGCTGGCTTTCAGAAGGGGATTCGAGAGAAGATTTTTATGCAGAGTTCCACATTGTGACAGTGCCCGCTGCT
AAATTAGATGAGCTGATGCACAGGGATTTGGTTTTCCATGTCTTGACTTTCAGTCAAGTTTGCATGTCTTGA
Protein sequenceShow/hide protein sequence
MASFAARAIFRSSSGSGCKAATLLSAGARAAPARSPFRIASKRPFSHCSARVPVEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEGDSREDFYAEFHIVTVPAA
KLDELMHRDLVFHVLTFSQVCMS