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Spg006180 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg006180
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTropomyosin-like
Genome locationscaffold4:3122827..3123469
RNA-Seq ExpressionSpg006180
SyntenySpg006180
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142007.1 uncharacterized protein LOC111012242 [Momordica charantia]3.7e-2296.61Show/hide
Query:  MEDKGKGTDRWNGAVANLTEMASNLESLQKLLLKKAVYVDDETFARASLCSEQARTIKV
        MEDKGKGTDRW+GAVANLTEMASNLESLQKLLLKKAVYVDDETFA+ASLCSEQARTIKV
Subjt:  MEDKGKGTDRWNGAVANLTEMASNLESLQKLLLKKAVYVDDETFARASLCSEQARTIKV
XP_022963475.1 uncharacterized protein LOC111463800 isoform X1 [Cucurbita moschata]1.1e-2193.22Show/hide
Query:  MEDKGKGTDRWNGAVANLTEMASNLESLQKLLLKKAVYVDDETFARASLCSEQARTIKV
        MEDKGKGTDRW+GAVAN+TEMASNLESLQK+L+KKAVYVDDETFARASLCSEQARTIKV
Subjt:  MEDKGKGTDRWNGAVANLTEMASNLESLQKLLLKKAVYVDDETFARASLCSEQARTIKV
XP_022963476.1 uncharacterized protein LOC111463800 isoform X2 [Cucurbita moschata]1.1e-2193.22Show/hide
Query:  MEDKGKGTDRWNGAVANLTEMASNLESLQKLLLKKAVYVDDETFARASLCSEQARTIKV
        MEDKGKGTDRW+GAVAN+TEMASNLESLQK+L+KKAVYVDDETFARASLCSEQARTIKV
Subjt:  MEDKGKGTDRWNGAVANLTEMASNLESLQKLLLKKAVYVDDETFARASLCSEQARTIKV
XP_038886855.1 uncharacterized protein LOC120077075 isoform X1 [Benincasa hispida]3.7e-2296.61Show/hide
Query:  MEDKGKGTDRWNGAVANLTEMASNLESLQKLLLKKAVYVDDETFARASLCSEQARTIKV
        MEDKGKGTDRW+GAVANLTEMASNLESLQKLLLKKAVYVDDETFARASLCS+QARTIKV
Subjt:  MEDKGKGTDRWNGAVANLTEMASNLESLQKLLLKKAVYVDDETFARASLCSEQARTIKV
XP_038886856.1 uncharacterized protein LOC120077075 isoform X2 [Benincasa hispida]3.7e-2296.61Show/hide
Query:  MEDKGKGTDRWNGAVANLTEMASNLESLQKLLLKKAVYVDDETFARASLCSEQARTIKV
        MEDKGKGTDRW+GAVANLTEMASNLESLQKLLLKKAVYVDDETFARASLCS+QARTIKV
Subjt:  MEDKGKGTDRWNGAVANLTEMASNLESLQKLLLKKAVYVDDETFARASLCSEQARTIKV
TrEMBL top hitse value%identityAlignment
A0A0A0K2J2 Uncharacterized protein5.2e-2294.92Show/hide
Query:  MEDKGKGTDRWNGAVANLTEMASNLESLQKLLLKKAVYVDDETFARASLCSEQARTIKV
        MEDKGKGTDRW+GAVANLTEM SNL+SLQKLLLKKAVYVDDETFARASLCSEQARTIKV
Subjt:  MEDKGKGTDRWNGAVANLTEMASNLESLQKLLLKKAVYVDDETFARASLCSEQARTIKV
A0A6J1CLE5 uncharacterized protein LOC1110122421.8e-2296.61Show/hide
Query:  MEDKGKGTDRWNGAVANLTEMASNLESLQKLLLKKAVYVDDETFARASLCSEQARTIKV
        MEDKGKGTDRW+GAVANLTEMASNLESLQKLLLKKAVYVDDETFA+ASLCSEQARTIKV
Subjt:  MEDKGKGTDRWNGAVANLTEMASNLESLQKLLLKKAVYVDDETFARASLCSEQARTIKV
A0A6J1HG82 uncharacterized protein LOC111463800 isoform X25.2e-2293.22Show/hide
Query:  MEDKGKGTDRWNGAVANLTEMASNLESLQKLLLKKAVYVDDETFARASLCSEQARTIKV
        MEDKGKGTDRW+GAVAN+TEMASNLESLQK+L+KKAVYVDDETFARASLCSEQARTIKV
Subjt:  MEDKGKGTDRWNGAVANLTEMASNLESLQKLLLKKAVYVDDETFARASLCSEQARTIKV
A0A6J1HI40 uncharacterized protein LOC111463800 isoform X15.2e-2293.22Show/hide
Query:  MEDKGKGTDRWNGAVANLTEMASNLESLQKLLLKKAVYVDDETFARASLCSEQARTIKV
        MEDKGKGTDRW+GAVAN+TEMASNLESLQK+L+KKAVYVDDETFARASLCSEQARTIKV
Subjt:  MEDKGKGTDRWNGAVANLTEMASNLESLQKLLLKKAVYVDDETFARASLCSEQARTIKV
A0A6J1JEJ3 uncharacterized protein LOC1114861881.2e-2191.8Show/hide
Query:  MEDKGKGTDRWNGAVANLTEMASNLESLQKLLLKKAVYVDDETFARASLCSEQARTIKVSD
        MEDKGKGTDRW GAVANLTEMASNLE  QKLLLKKAVYVDDETFARASLCS+QARTIKV D
Subjt:  MEDKGKGTDRWNGAVANLTEMASNLESLQKLLLKKAVYVDDETFARASLCSEQARTIKVSD
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G64180.1 unknown protein1.1e-1670Show/hide
Query:  MEDKGKGTD-RWNGAVANLTEMASNLESLQKLLLKKAVYVDDETFARASLCSEQARTIKV
        ME++  G+D RW G++ N+TEMASNL+SLQKLLLKKAV+V+++TF+RASL SEQARTIKV
Subjt:  MEDKGKGTD-RWNGAVANLTEMASNLESLQKLLLKKAVYVDDETFARASLCSEQARTIKV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGACAAGGGCAAAGGAACAGACAGATGGAACGGTGCAGTAGCCAATCTCACAGAGATGGCATCCAACCTAGAGTCACTCCAGAAGCTTTTATTGAAGAAAGCCGT
CTATGTAGACGACGAGACGTTTGCCAGAGCTTCATTGTGCTCCGAACAAGCGAGGACGATCAAGGTATCTGATATATGGCTTGAAATTTCAAATTTGCTATGGAATGTGG
GAGAGTGGGAGATGAGTGATTGTGCAAAGATATAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGGACAAGGGCAAAGGAACAGACAGATGGAACGGTGCAGTAGCCAATCTCACAGAGATGGCATCCAACCTAGAGTCACTCCAGAAGCTTTTATTGAAGAAAGCCGT
CTATGTAGACGACGAGACGTTTGCCAGAGCTTCATTGTGCTCCGAACAAGCGAGGACGATCAAGGTATCTGATATATGGCTTGAAATTTCAAATTTGCTATGGAATGTGG
GAGAGTGGGAGATGAGTGATTGTGCAAAGATATAG
Protein sequenceShow/hide protein sequence
MEDKGKGTDRWNGAVANLTEMASNLESLQKLLLKKAVYVDDETFARASLCSEQARTIKVSDIWLEISNLLWNVGEWEMSDCAKI