; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg006187 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg006187
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionPHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein
Genome locationscaffold4:6347692..6348569
RNA-Seq ExpressionSpg006187
SyntenySpg006187
Gene Ontology termsGO:0006325 - chromatin organization (biological process)
GO:0007165 - signal transduction (biological process)
GO:0050790 - regulation of catalytic activity (biological process)
GO:0000159 - protein phosphatase type 2A complex (cellular component)
GO:0003682 - chromatin binding (molecular function)
GO:0016740 - transferase activity (molecular function)
GO:0019888 - protein phosphatase regulator activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040219.1 chromatin remodeling protein EBS-like isoform X1 [Cucumis melo var. makuwa]1.0e-4492Show/hide
Query:  MAKTKPGKKDLDSYTIKGTNKIVRPGDCVLMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYYWSEESIGGRRQFHGAKELFLSDHFDVQS--TVNVRC
        MAKTKPGKKDLDSYTIKGTNKIVRPGDCVLMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYY  EESIGGRRQFHGAKELFLSDHFDVQS  T+  +C
Subjt:  MAKTKPGKKDLDSYTIKGTNKIVRPGDCVLMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYYWSEESIGGRRQFHGAKELFLSDHFDVQS--TVNVRC

XP_008455467.1 PREDICTED: chromatin remodeling protein EBS-like isoform X1 [Cucumis melo]1.0e-4492Show/hide
Query:  MAKTKPGKKDLDSYTIKGTNKIVRPGDCVLMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYYWSEESIGGRRQFHGAKELFLSDHFDVQS--TVNVRC
        MAKTKPGKKDLDSYTIKGTNKIVRPGDCVLMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYY  EESIGGRRQFHGAKELFLSDHFDVQS  T+  +C
Subjt:  MAKTKPGKKDLDSYTIKGTNKIVRPGDCVLMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYYWSEESIGGRRQFHGAKELFLSDHFDVQS--TVNVRC

XP_022930734.1 chromatin remodeling protein EBS-like [Cucurbita moschata]1.0e-4492Show/hide
Query:  MAKTKPGKKDLDSYTIKGTNKIVRPGDCVLMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYYWSEESIGGRRQFHGAKELFLSDHFDVQS--TVNVRC
        MAKTKPGKKDLDSYTIKGTNKIVRPGDCVLMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYY  EESIGGRRQFHGAKELFLSDHFDVQS  T+  +C
Subjt:  MAKTKPGKKDLDSYTIKGTNKIVRPGDCVLMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYYWSEESIGGRRQFHGAKELFLSDHFDVQS--TVNVRC

XP_038888815.1 chromatin remodeling protein EBS-like isoform X1 [Benincasa hispida]1.0e-4492Show/hide
Query:  MAKTKPGKKDLDSYTIKGTNKIVRPGDCVLMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYYWSEESIGGRRQFHGAKELFLSDHFDVQS--TVNVRC
        MAKTKPGKKDLDSYTIKGTNKIVRPGDCVLMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYY  EESIGGRRQFHGAKELFLSDHFDVQS  T+  +C
Subjt:  MAKTKPGKKDLDSYTIKGTNKIVRPGDCVLMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYYWSEESIGGRRQFHGAKELFLSDHFDVQS--TVNVRC

XP_038888817.1 chromatin remodeling protein EBS-like isoform X2 [Benincasa hispida]1.0e-4492Show/hide
Query:  MAKTKPGKKDLDSYTIKGTNKIVRPGDCVLMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYYWSEESIGGRRQFHGAKELFLSDHFDVQS--TVNVRC
        MAKTKPGKKDLDSYTIKGTNKIVRPGDCVLMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYY  EESIGGRRQFHGAKELFLSDHFDVQS  T+  +C
Subjt:  MAKTKPGKKDLDSYTIKGTNKIVRPGDCVLMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYYWSEESIGGRRQFHGAKELFLSDHFDVQS--TVNVRC

TrEMBL top hitse value%identityAlignment
A0A1S3C280 chromatin remodeling protein EBS-like isoform X15.0e-4592Show/hide
Query:  MAKTKPGKKDLDSYTIKGTNKIVRPGDCVLMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYYWSEESIGGRRQFHGAKELFLSDHFDVQS--TVNVRC
        MAKTKPGKKDLDSYTIKGTNKIVRPGDCVLMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYY  EESIGGRRQFHGAKELFLSDHFDVQS  T+  +C
Subjt:  MAKTKPGKKDLDSYTIKGTNKIVRPGDCVLMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYYWSEESIGGRRQFHGAKELFLSDHFDVQS--TVNVRC

A0A5A7PF95 PHD finger family protein / bromo-adjacenthomology (BAH) domain-containing protein6.5e-4591Show/hide
Query:  MAKTKPGKKDLDSYTIKGTNKIVRPGDCVLMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYYWSEESIGGRRQFHGAKELFLSDHFDVQS--TVNVRC
        MAKTKPGKKDLDSYTIKGTNK+VRPGDCVLMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYY  EESIGGRRQFHGAKELFLSDHFDVQS  T+  +C
Subjt:  MAKTKPGKKDLDSYTIKGTNKIVRPGDCVLMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYYWSEESIGGRRQFHGAKELFLSDHFDVQS--TVNVRC

A0A5D3C9X7 Chromatin remodeling protein EBS-like isoform X15.0e-4592Show/hide
Query:  MAKTKPGKKDLDSYTIKGTNKIVRPGDCVLMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYYWSEESIGGRRQFHGAKELFLSDHFDVQS--TVNVRC
        MAKTKPGKKDLDSYTIKGTNKIVRPGDCVLMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYY  EESIGGRRQFHGAKELFLSDHFDVQS  T+  +C
Subjt:  MAKTKPGKKDLDSYTIKGTNKIVRPGDCVLMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYYWSEESIGGRRQFHGAKELFLSDHFDVQS--TVNVRC

A0A6J1ESB9 chromatin remodeling protein EBS-like5.0e-4592Show/hide
Query:  MAKTKPGKKDLDSYTIKGTNKIVRPGDCVLMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYYWSEESIGGRRQFHGAKELFLSDHFDVQS--TVNVRC
        MAKTKPGKKDLDSYTIKGTNKIVRPGDCVLMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYY  EESIGGRRQFHGAKELFLSDHFDVQS  T+  +C
Subjt:  MAKTKPGKKDLDSYTIKGTNKIVRPGDCVLMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYYWSEESIGGRRQFHGAKELFLSDHFDVQS--TVNVRC

A0A6J1JN00 chromatin remodeling protein EBS-like5.0e-4592Show/hide
Query:  MAKTKPGKKDLDSYTIKGTNKIVRPGDCVLMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYYWSEESIGGRRQFHGAKELFLSDHFDVQS--TVNVRC
        MAKTKPGKKDLDSYTIKGTNKIVRPGDCVLMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYY  EESIGGRRQFHGAKELFLSDHFDVQS  T+  +C
Subjt:  MAKTKPGKKDLDSYTIKGTNKIVRPGDCVLMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYYWSEESIGGRRQFHGAKELFLSDHFDVQS--TVNVRC

SwissProt top hitse value%identityAlignment
F4JGB7 Chromatin remodeling protein At4g042603.5e-2765.09Show/hide
Query:  AKTKPGKKDLD--SYTIKGTNKIVR-----PGDCVLMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYYWSEESIGGRRQFHGAKELFLSDHFDVQS--
        +K K GKKD+      I   N IV       GDCVLMRPSD+ K PYVARVEKIEAD RNNVKV  RWYY  EES GGRRQ HGAKELFLSDHFDVQS  
Subjt:  AKTKPGKKDLD--SYTIKGTNKIVR-----PGDCVLMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYYWSEESIGGRRQFHGAKELFLSDHFDVQS--

Query:  TVNVRC
        T+  +C
Subjt:  TVNVRC

F4JL28 Chromatin remodeling protein EBS1.8e-3978.79Show/hide
Query:  AKTKPGKKDLDSYTIKGTNKIVRPGDCVLMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYYWSEESIGGRRQFHGAKELFLSDHFDVQS--TVNVRC
        +K K G+K+LDSYTIKGTNK+VR GDCVLMRPSD+ KPPYVARVEKIEAD RNNVKV  RWYY  EES+GGRRQFHGAKELFLSDHFDVQS  T+  +C
Subjt:  AKTKPGKKDLDSYTIKGTNKIVRPGDCVLMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYYWSEESIGGRRQFHGAKELFLSDHFDVQS--TVNVRC

Q3UHR0 BAH and coiled-coil domain-containing protein 19.8e-0632.05Show/hide
Query:  VRPGDCVLMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYYWSEESIGGRRQFHGAKELFLSDHFDVQ--STVNVRC
        +R GDC +   +     PY+ R+E +     +N+ V+V+W+Y  EE+  G+RQ  G   L+ S H D     T++ +C
Subjt:  VRPGDCVLMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYYWSEESIGGRRQFHGAKELFLSDHFDVQ--STVNVRC

Q9FEN9 Chromatin remodeling protein SHL7.7e-2762.38Show/hide
Query:  MAKTKPGKKDLDSYTIKGTNKIVRPGDCVLMRPSDSDKPPYVARVEKIEADHR-NNVKVRVRWYYWSEESIGGRRQFHGAKELFLSDHFDVQS--TVNVR
        M K K  +K L SY +K  NK ++ GD VLMR S+  KP YVARVE IE D R ++ KVRVRWYY  EESIGGRRQFHGAKE+FLSDHFD QS  T+  +
Subjt:  MAKTKPGKKDLDSYTIKGTNKIVRPGDCVLMRPSDSDKPPYVARVEKIEADHR-NNVKVRVRWYYWSEESIGGRRQFHGAKELFLSDHFDVQS--TVNVR

Query:  C
        C
Subjt:  C

Q9P281 BAH and coiled-coil domain-containing protein 19.8e-0632.05Show/hide
Query:  VRPGDCVLMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYYWSEESIGGRRQFHGAKELFLSDHFDVQ--STVNVRC
        +R GDC +   +     PY+ R+E +     +N+ V+V+W+Y  EE+  G+RQ  G   L+ S H D     T++ +C
Subjt:  VRPGDCVLMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYYWSEESIGGRRQFHGAKELFLSDHFDVQ--STVNVRC

Arabidopsis top hitse value%identityAlignment
AT4G04260.1 Bromo-adjacent homology (BAH) domain-containing protein1.7e-2477.14Show/hide
Query:  MRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYYWSEESIGGRRQFHGAKELFLSDHFDVQS--TVNVRC
        MRPSD+ K PYVARVEKIEAD RNNVKV  RWYY  EES GGRRQ HGAKELFLSDHFDVQS  T+  +C
Subjt:  MRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYYWSEESIGGRRQFHGAKELFLSDHFDVQS--TVNVRC

AT4G22140.1 PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein1.3e-4078.79Show/hide
Query:  AKTKPGKKDLDSYTIKGTNKIVRPGDCVLMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYYWSEESIGGRRQFHGAKELFLSDHFDVQS--TVNVRC
        +K K G+K+LDSYTIKGTNK+VR GDCVLMRPSD+ KPPYVARVEKIEAD RNNVKV  RWYY  EES+GGRRQFHGAKELFLSDHFDVQS  T+  +C
Subjt:  AKTKPGKKDLDSYTIKGTNKIVRPGDCVLMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYYWSEESIGGRRQFHGAKELFLSDHFDVQS--TVNVRC

AT4G22140.2 PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein1.3e-4078.79Show/hide
Query:  AKTKPGKKDLDSYTIKGTNKIVRPGDCVLMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYYWSEESIGGRRQFHGAKELFLSDHFDVQS--TVNVRC
        +K K G+K+LDSYTIKGTNK+VR GDCVLMRPSD+ KPPYVARVEKIEAD RNNVKV  RWYY  EES+GGRRQFHGAKELFLSDHFDVQS  T+  +C
Subjt:  AKTKPGKKDLDSYTIKGTNKIVRPGDCVLMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYYWSEESIGGRRQFHGAKELFLSDHFDVQS--TVNVRC

AT4G39100.1 PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein5.5e-2862.38Show/hide
Query:  MAKTKPGKKDLDSYTIKGTNKIVRPGDCVLMRPSDSDKPPYVARVEKIEADHR-NNVKVRVRWYYWSEESIGGRRQFHGAKELFLSDHFDVQS--TVNVR
        M K K  +K L SY +K  NK ++ GD VLMR S+  KP YVARVE IE D R ++ KVRVRWYY  EESIGGRRQFHGAKE+FLSDHFD QS  T+  +
Subjt:  MAKTKPGKKDLDSYTIKGTNKIVRPGDCVLMRPSDSDKPPYVARVEKIEADHR-NNVKVRVRWYYWSEESIGGRRQFHGAKELFLSDHFDVQS--TVNVR

Query:  C
        C
Subjt:  C

AT4G39100.2 PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein5.5e-2862.38Show/hide
Query:  MAKTKPGKKDLDSYTIKGTNKIVRPGDCVLMRPSDSDKPPYVARVEKIEADHR-NNVKVRVRWYYWSEESIGGRRQFHGAKELFLSDHFDVQS--TVNVR
        M K K  +K L SY +K  NK ++ GD VLMR S+  KP YVARVE IE D R ++ KVRVRWYY  EESIGGRRQFHGAKE+FLSDHFD QS  T+  +
Subjt:  MAKTKPGKKDLDSYTIKGTNKIVRPGDCVLMRPSDSDKPPYVARVEKIEADHR-NNVKVRVRWYYWSEESIGGRRQFHGAKELFLSDHFDVQS--TVNVR

Query:  C
        C
Subjt:  C


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAAGACTAAACCCGGGAAGAAAGATCTTGATTCATACACCATCAAAGGCACCAACAAAATTGTTCGACCTGGTGATTGTGTGTTAATGCGACCGTCGGACTCCGA
TAAGCCTCCATACGTTGCTCGCGTTGAAAAAATTGAAGCTGATCATCGGAACAATGTGAAGGTTCGGGTTCGGTGGTATTATTGGTCGGAAGAATCGATTGGAGGACGGA
GGCAGTTCCACGGGGCTAAGGAGCTTTTTCTCTCCGATCATTTTGATGTTCAGAGTACTGTAAATGTGAGATGCCATACAACCCCGATGACCTTATGGTTCAGTGTATGG
GTTGCAAAGATTGGTAAGTTCCTTGTTTTCTTAAACGCCTACTGTAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAAGACTAAACCCGGGAAGAAAGATCTTGATTCATACACCATCAAAGGCACCAACAAAATTGTTCGACCTGGTGATTGTGTGTTAATGCGACCGTCGGACTCCGA
TAAGCCTCCATACGTTGCTCGCGTTGAAAAAATTGAAGCTGATCATCGGAACAATGTGAAGGTTCGGGTTCGGTGGTATTATTGGTCGGAAGAATCGATTGGAGGACGGA
GGCAGTTCCACGGGGCTAAGGAGCTTTTTCTCTCCGATCATTTTGATGTTCAGAGTACTGTAAATGTGAGATGCCATACAACCCCGATGACCTTATGGTTCAGTGTATGG
GTTGCAAAGATTGGTAAGTTCCTTGTTTTCTTAAACGCCTACTGTAATTGA
Protein sequenceShow/hide protein sequence
MAKTKPGKKDLDSYTIKGTNKIVRPGDCVLMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYYWSEESIGGRRQFHGAKELFLSDHFDVQSTVNVRCHTTPMTLWFSVW
VAKIGKFLVFLNAYCN