; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg006199 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg006199
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionChlorophyll a/b-binding family protein
Genome locationscaffold4:4624789..4631242
RNA-Seq ExpressionSpg006199
SyntenySpg006199
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048752.1 hypothetical protein E6C27_scaffold43G00600 [Cucumis melo var. makuwa]1.5e-3473.23Show/hide
Query:  MGRHSSEPTMVGTSIALLQERFRRLQKDKQRREKKELLNLLSDSNRVDALTIHL--EPNGSSTSRDLDSDSLSLGLNLQ-NAGKQV--HIHEARLMPGVT
        MGRH SEPTMVGTSIALLQERFR+LQK+KQ+RE+KELLNLL +SNRVDA  +HL  EPNGS T R LDS+SLSLGLNL+ N GKQV   IHEAR +P  T
Subjt:  MGRHSSEPTMVGTSIALLQERFRRLQKDKQRREKKELLNLLSDSNRVDALTIHL--EPNGSSTSRDLDSDSLSLGLNLQ-NAGKQV--HIHEARLMPGVT

Query:  KFWPGNSVTTSTLRSFDSPDVDTTLHL
        KF P NS   STLRSFD+ +VDTTLHL
Subjt:  KFWPGNSVTTSTLRSFDSPDVDTTLHL

KAE8646145.1 hypothetical protein Csa_016195, partial [Cucumis sativus]7.2e-3481.9Show/hide
Query:  MGRHSSEPTMVGTSIALLQERFRRLQKDKQRREKKELLNLLSDSNRVDALTIHLEPNGSSTSRDLDSDSLSLGLNLQ-NAGKQV--HIHEARLMPGVTKF
        MGRH+SEPTMVGTSIALLQERFR+LQK+KQRRE+KELLNLL +SNRVDA  +HLEPNGSSTSRDLDS+SLSLGLNL+ NAGKQV   IHEAR MPG TKF
Subjt:  MGRHSSEPTMVGTSIALLQERFRRLQKDKQRREKKELLNLLSDSNRVDALTIHLEPNGSSTSRDLDSDSLSLGLNLQ-NAGKQV--HIHEARLMPGVTKF

Query:  WPGNS
          GNS
Subjt:  WPGNS

KAG6572236.1 hypothetical protein SDJN03_28964, partial [Cucurbita argyrosperma subsp. sororia]6.6e-2762.5Show/hide
Query:  LQMGRHSSEPTMVGTSIALLQERFRRLQKDKQRREKKELLNLLSDSNRVDALTIHLEPNGSSTSRDLDSDSLSLGLNLQNAGKQVHIHEARLMPGVTKFW
        +QM RHSSEP +VGTSIALLQERFR+LQK+K RREKKE++ LLSDSN +            STSRDL  +SLSLGLNL NAGKQV  HE RLMPG TK  
Subjt:  LQMGRHSSEPTMVGTSIALLQERFRRLQKDKQRREKKELLNLLSDSNRVDALTIHLEPNGSSTSRDLDSDSLSLGLNLQNAGKQVHIHEARLMPGVTKFW

Query:  PGNSVTTSTLRSFDSP----DVDTTLHL
        P       T RS+D+P    DVDTTLHL
Subjt:  PGNSVTTSTLRSFDSP----DVDTTLHL

KAG6589104.1 hypothetical protein SDJN03_17669, partial [Cucurbita argyrosperma subsp. sororia]1.1e-2678.26Show/hide
Query:  MGRHSSEPTMVGTSIALLQERFRRLQKDKQRREKKELLNLLSDSNRVDALTI-HLEPNGSSTSRDLDSDSLSLGLNLQNAGKQVHIHEARLM
        MGRHSSE TM+GTSIALLQERFR+LQKDKQRREKKELL+LLSDSNRV+  +I HLE N SS SRDL+ DSLSLGLN  +AGKQV IHEAR +
Subjt:  MGRHSSEPTMVGTSIALLQERFRRLQKDKQRREKKELLNLLSDSNRVDALTI-HLEPNGSSTSRDLDSDSLSLGLNLQNAGKQVHIHEARLM

XP_023916992.1 uncharacterized protein LOC112028527 [Quercus suber]1.5e-1847.66Show/hide
Query:  MGRHSSEPTMVGTSIALLQERFRRLQKDKQRREKKELLNLLSDSNRVDALT------IHLEPNGSSTSRDLDSDSLSLGLNLQNAGKQVHIHEARLMPGV
        MGR S++PTMV +SIALLQERFR+L+K K+RRE+KELLNL +++ R+   T      +  +P  ++ +R    DS SL LNLQ   KQ  + +A   P +
Subjt:  MGRHSSEPTMVGTSIALLQERFRRLQKDKQRREKKELLNLLSDSNRVDALT------IHLEPNGSSTSRDLDSDSLSLGLNLQNAGKQVHIHEARLMPGV

Query:  TKFWPGNSVTTSTLRSFDSPDVDTTLHL
        T  WP ++   ST RSF++ DVDT+LHL
Subjt:  TKFWPGNSVTTSTLRSFDSPDVDTTLHL

TrEMBL top hitse value%identityAlignment
A0A0A0K617 Uncharacterized protein7.1e-4380.8Show/hide
Query:  MGRHSSEPTMVGTSIALLQERFRRLQKDKQRREKKELLNLLSDSNRVDALTIHLEPNGSSTSRDLDSDSLSLGLNLQ-NAGKQV--HIHEARLMPGVTKF
        MGRH+SEPTMVGTSIALLQERFR+LQK+KQRRE+KELLNLL +SNRVDA  +HLEPNGSSTSRDLDS+SLSLGLNL+ NAGKQV   IHEAR MPG TKF
Subjt:  MGRHSSEPTMVGTSIALLQERFRRLQKDKQRREKKELLNLLSDSNRVDALTIHLEPNGSSTSRDLDSDSLSLGLNLQ-NAGKQV--HIHEARLMPGVTKF

Query:  WPGNSVTTSTLRSFDSPDVDTTLHL
          GNS   ST RSFDSP+VDTTLHL
Subjt:  WPGNSVTTSTLRSFDSPDVDTTLHL

A0A1Q3CDN4 Uncharacterized protein1.5e-1642.86Show/hide
Query:  MGRHSSEPTMVGTSIALLQERFRRLQKDKQRREKKELLNLLSDSNRV----DALTIHLEPNGSSTSRDLDSDSLSLGLNLQNAGKQVHIHEARLMPGVTK
        MG+ S +P+MV TSIALLQERF +LQ++K++R ++ELL + S S  +    ++      P      R    +SLSLGLNLQN   +  ++ A   P +T 
Subjt:  MGRHSSEPTMVGTSIALLQERFRRLQKDKQRREKKELLNLLSDSNRV----DALTIHLEPNGSSTSRDLDSDSLSLGLNLQNAGKQVHIHEARLMPGVTK

Query:  FWPGNSVTTSTLRSFDSPDVDTTLHL
        FWP ++ T +T R F++ DVDT+LHL
Subjt:  FWPGNSVTTSTLRSFDSPDVDTTLHL

A0A2N9FNY6 Uncharacterized protein3.5e-1849.61Show/hide
Query:  MGRHSSEPTMVGTSIALLQERFRRLQKDKQRREKKELLNLLSDSNRVDALTIHLEPNGSS-------TSRDLDSDSLSLGLNLQNAGKQVHIHEARLMPG
        MGR S++PTMV +SIALLQERFR+L+K K+RRE+KELL L +++ R+   T H EP+  S         R    DS SLGLNLQ   KQ    +A  MP 
Subjt:  MGRHSSEPTMVGTSIALLQERFRRLQKDKQRREKKELLNLLSDSNRVDALTIHLEPNGSS-------TSRDLDSDSLSLGLNLQNAGKQVHIHEARLMPG

Query:  VTKFWPGNSVTTSTLRSFDSPDVDTTLHL
        +   WP  +   ST RSF++ DVDT+LHL
Subjt:  VTKFWPGNSVTTSTLRSFDSPDVDTTLHL

A0A5D3E685 Uncharacterized protein7.1e-3573.23Show/hide
Query:  MGRHSSEPTMVGTSIALLQERFRRLQKDKQRREKKELLNLLSDSNRVDALTIHL--EPNGSSTSRDLDSDSLSLGLNLQ-NAGKQV--HIHEARLMPGVT
        MGRH SEPTMVGTSIALLQERFR+LQK+KQ+RE+KELLNLL +SNRVDA  +HL  EPNGS T R LDS+SLSLGLNL+ N GKQV   IHEAR +P  T
Subjt:  MGRHSSEPTMVGTSIALLQERFRRLQKDKQRREKKELLNLLSDSNRVDALTIHL--EPNGSSTSRDLDSDSLSLGLNLQ-NAGKQV--HIHEARLMPGVT

Query:  KFWPGNSVTTSTLRSFDSPDVDTTLHL
        KF P NS   STLRSFD+ +VDTTLHL
Subjt:  KFWPGNSVTTSTLRSFDSPDVDTTLHL

A0A7N2M9I5 Uncharacterized protein8.7e-1746.09Show/hide
Query:  MGRHSSEPTMVGTSIALLQERFRRLQKDKQRREKKELLNLLSDSNRVDALT------IHLEPNGSSTSRDLDSDSLSLGLNLQNAGKQVHIHEARLMPGV
        M R S++ TMV +SIALLQERFR+L+K K+RRE+KELLNL +++ R+   T      +  +P  ++ +R    DS SL LNLQ   KQ  + +A   P +
Subjt:  MGRHSSEPTMVGTSIALLQERFRRLQKDKQRREKKELLNLLSDSNRVDALT------IHLEPNGSSTSRDLDSDSLSLGLNLQNAGKQVHIHEARLMPGV

Query:  TKFWPGNSVTTSTLRSFDSPDVDTTLHL
        T  WP  +   ST RSF++ DVDT+LHL
Subjt:  TKFWPGNSVTTSTLRSFDSPDVDTTLHL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACCCGGGTCTAATGGGATCCAACATGTCAACGAATTTACCTGATGACATTTTCCATCCTGAATGGCAGCAACAATGTGTATTGCTGTTATTTATTAACGTGTTGGA
GATGATATTGCTTTACAAGAAGCTTCTAAAGGTAGTACCGAAAGAATGCTGCCGTGAAGCAGGAAGTGACAATCCCCTTGGCAGTGTTCTGCAAATGGGTAGGCACAGTA
GTGAACCCACCATGGTTGGTACCTCCATAGCTTTGTTACAGGAAAGGTTCAGGCGGTTGCAGAAAGACAAGCAAAGGAGAGAGAAGAAGGAGCTTCTTAACCTGTTATCC
GATTCAAATAGGGTTGATGCCTTGACAATTCATTTAGAACCAAATGGCTCGTCGACCTCAAGAGATTTGGATTCTGATTCCCTTTCCCTTGGCCTGAACTTGCAGAATGC
AGGTAAGCAAGTTCATATCCATGAAGCCAGGTTGATGCCTGGTGTGACCAAGTTTTGGCCCGGAAATTCAGTCACGACAAGTACGTTAAGAAGTTTCGATAGTCCAGACG
TGGATACTACTCTTCATCTATAG
mRNA sequenceShow/hide mRNA sequence
ATGGACCCGGGTCTAATGGGATCCAACATGTCAACGAATTTACCTGATGACATTTTCCATCCTGAATGGCAGCAACAATGTGTATTGCTGTTATTTATTAACGTGTTGGA
GATGATATTGCTTTACAAGAAGCTTCTAAAGGTAGTACCGAAAGAATGCTGCCGTGAAGCAGGAAGTGACAATCCCCTTGGCAGTGTTCTGCAAATGGGTAGGCACAGTA
GTGAACCCACCATGGTTGGTACCTCCATAGCTTTGTTACAGGAAAGGTTCAGGCGGTTGCAGAAAGACAAGCAAAGGAGAGAGAAGAAGGAGCTTCTTAACCTGTTATCC
GATTCAAATAGGGTTGATGCCTTGACAATTCATTTAGAACCAAATGGCTCGTCGACCTCAAGAGATTTGGATTCTGATTCCCTTTCCCTTGGCCTGAACTTGCAGAATGC
AGGTAAGCAAGTTCATATCCATGAAGCCAGGTTGATGCCTGGTGTGACCAAGTTTTGGCCCGGAAATTCAGTCACGACAAGTACGTTAAGAAGTTTCGATAGTCCAGACG
TGGATACTACTCTTCATCTATAG
Protein sequenceShow/hide protein sequence
MDPGLMGSNMSTNLPDDIFHPEWQQQCVLLLFINVLEMILLYKKLLKVVPKECCREAGSDNPLGSVLQMGRHSSEPTMVGTSIALLQERFRRLQKDKQRREKKELLNLLS
DSNRVDALTIHLEPNGSSTSRDLDSDSLSLGLNLQNAGKQVHIHEARLMPGVTKFWPGNSVTTSTLRSFDSPDVDTTLHL