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Spg006205 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg006205
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCalcium-binding EF-hand family protein
Genome locationscaffold4:6014514..6014930
RNA-Seq ExpressionSpg006205
SyntenySpg006205
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589130.1 hypothetical protein SDJN03_17695, partial [Cucurbita argyrosperma subsp. sororia]1.2e-5987.59Show/hide
Query:  MSVEILDGATIVNFVEDDEAFGATIRERFSHLDIDRDGALSYGEMLRELQSLRVFETHFGIDAKLDPDELSSVYGSLFLQFDRDCNGKVDLGEFMAETKK
        MSVEILDGATIVNFVEDDE FGA +RERFSHLDID DG LSY EMLRELQSLRVFETHFGID K DPDELSSVYGSLFLQFDRDCNGKVD+GEFM ETKK
Subjt:  MSVEILDGATIVNFVEDDEAFGATIRERFSHLDIDRDGALSYGEMLRELQSLRVFETHFGIDAKLDPDELSSVYGSLFLQFDRDCNGKVDLGEFMAETKK

Query:  MMLAMANGIGLSPVQMLLEENSFLKKAVDRESTKVVA
        MM+AMANGIG SPVQM+LEENS LK+AV+RESTKV A
Subjt:  MMLAMANGIGLSPVQMLLEENSFLKKAVDRESTKVVA

XP_004144527.1 uncharacterized protein LOC101208564 [Cucumis sativus]7.3e-6087.68Show/hide
Query:  MSVEILDGATIVNFVEDDEAFGATIRERFSHLDIDRDGALSYGEMLRELQSLRVFETHFGIDAKLDPDELSSVYGSLFLQFDRDCNGKVDLGEFMAETKK
        MSVEIL+ ATI+NFVED+EAF   IRERFSHLDIDRDG L YGEML+ELQSLRV ETHFGID K DP+ELSSVYGSLFLQFDRDCNGKVDLGEFM ETKK
Subjt:  MSVEILDGATIVNFVEDDEAFGATIRERFSHLDIDRDGALSYGEMLRELQSLRVFETHFGIDAKLDPDELSSVYGSLFLQFDRDCNGKVDLGEFMAETKK

Query:  MMLAMANGIGLSPVQMLLEENSFLKKAVDRESTKVVAA
        MMLAMANGIGLSPVQMLLEENSFLKKAVDRESTK+ AA
Subjt:  MMLAMANGIGLSPVQMLLEENSFLKKAVDRESTKVVAA

XP_008455503.1 PREDICTED: uncharacterized protein LOC103495655 [Cucumis melo]5.1e-6189.13Show/hide
Query:  MSVEILDGATIVNFVEDDEAFGATIRERFSHLDIDRDGALSYGEMLRELQSLRVFETHFGIDAKLDPDELSSVYGSLFLQFDRDCNGKVDLGEFMAETKK
        MSVEILD ATIVNFVED+EAF   IRERFSHLD+DRDG L YGEML+ELQSLRVFETHFGID K DP+ELSSVY SLFLQFDRDCNGKVDLGEFMAETKK
Subjt:  MSVEILDGATIVNFVEDDEAFGATIRERFSHLDIDRDGALSYGEMLRELQSLRVFETHFGIDAKLDPDELSSVYGSLFLQFDRDCNGKVDLGEFMAETKK

Query:  MMLAMANGIGLSPVQMLLEENSFLKKAVDRESTKVVAA
        MMLAMANGIGLSPVQMLLEENSFLKKAVDRESTK+ AA
Subjt:  MMLAMANGIGLSPVQMLLEENSFLKKAVDRESTKVVAA

XP_023529818.1 uncharacterized protein LOC111792532 [Cucurbita pepo subsp. pepo]9.5e-6088.32Show/hide
Query:  MSVEILDGATIVNFVEDDEAFGATIRERFSHLDIDRDGALSYGEMLRELQSLRVFETHFGIDAKLDPDELSSVYGSLFLQFDRDCNGKVDLGEFMAETKK
        MSVEILDGATIVNFVEDDE FGA +RERFSHLDID DG LSY EMLRELQSLRVFETHFGID K DPDELSSVYGSLFLQFDRDCNGKVD+GEFM ETKK
Subjt:  MSVEILDGATIVNFVEDDEAFGATIRERFSHLDIDRDGALSYGEMLRELQSLRVFETHFGIDAKLDPDELSSVYGSLFLQFDRDCNGKVDLGEFMAETKK

Query:  MMLAMANGIGLSPVQMLLEENSFLKKAVDRESTKVVA
        MM+AMANGIGL PVQM+LEENS LKKAV+RESTKV A
Subjt:  MMLAMANGIGLSPVQMLLEENSFLKKAVDRESTKVVA

XP_038888629.1 uncharacterized protein LOC120078427 [Benincasa hispida]1.1e-6088.41Show/hide
Query:  MSVEILDGATIVNFVEDDEAFGATIRERFSHLDIDRDGALSYGEMLRELQSLRVFETHFGIDAKLDPDELSSVYGSLFLQFDRDCNGKVDLGEFMAETKK
        MSVEILD ATIVNFVED+EAF  +IRERFSHLD+DRDG L YGEML+ELQSLRV ETHFGID K DPDELSSVYGSLF QFDRDCNGKVDLGEFMAETKK
Subjt:  MSVEILDGATIVNFVEDDEAFGATIRERFSHLDIDRDGALSYGEMLRELQSLRVFETHFGIDAKLDPDELSSVYGSLFLQFDRDCNGKVDLGEFMAETKK

Query:  MMLAMANGIGLSPVQMLLEENSFLKKAVDRESTKVVAA
        MMLAMANGIG SPVQMLLEENSFLKKAVDRESTK+ AA
Subjt:  MMLAMANGIGLSPVQMLLEENSFLKKAVDRESTKVVAA

TrEMBL top hitse value%identityAlignment
A0A0A0K1Y0 Calcium ion binding protein3.5e-6087.68Show/hide
Query:  MSVEILDGATIVNFVEDDEAFGATIRERFSHLDIDRDGALSYGEMLRELQSLRVFETHFGIDAKLDPDELSSVYGSLFLQFDRDCNGKVDLGEFMAETKK
        MSVEIL+ ATI+NFVED+EAF   IRERFSHLDIDRDG L YGEML+ELQSLRV ETHFGID K DP+ELSSVYGSLFLQFDRDCNGKVDLGEFM ETKK
Subjt:  MSVEILDGATIVNFVEDDEAFGATIRERFSHLDIDRDGALSYGEMLRELQSLRVFETHFGIDAKLDPDELSSVYGSLFLQFDRDCNGKVDLGEFMAETKK

Query:  MMLAMANGIGLSPVQMLLEENSFLKKAVDRESTKVVAA
        MMLAMANGIGLSPVQMLLEENSFLKKAVDRESTK+ AA
Subjt:  MMLAMANGIGLSPVQMLLEENSFLKKAVDRESTKVVAA

A0A1S3C1T0 uncharacterized protein LOC1034956552.4e-6189.13Show/hide
Query:  MSVEILDGATIVNFVEDDEAFGATIRERFSHLDIDRDGALSYGEMLRELQSLRVFETHFGIDAKLDPDELSSVYGSLFLQFDRDCNGKVDLGEFMAETKK
        MSVEILD ATIVNFVED+EAF   IRERFSHLD+DRDG L YGEML+ELQSLRVFETHFGID K DP+ELSSVY SLFLQFDRDCNGKVDLGEFMAETKK
Subjt:  MSVEILDGATIVNFVEDDEAFGATIRERFSHLDIDRDGALSYGEMLRELQSLRVFETHFGIDAKLDPDELSSVYGSLFLQFDRDCNGKVDLGEFMAETKK

Query:  MMLAMANGIGLSPVQMLLEENSFLKKAVDRESTKVVAA
        MMLAMANGIGLSPVQMLLEENSFLKKAVDRESTK+ AA
Subjt:  MMLAMANGIGLSPVQMLLEENSFLKKAVDRESTKVVAA

A0A5D3DDG8 Calcium-binding EF-hand family protein2.4e-6189.13Show/hide
Query:  MSVEILDGATIVNFVEDDEAFGATIRERFSHLDIDRDGALSYGEMLRELQSLRVFETHFGIDAKLDPDELSSVYGSLFLQFDRDCNGKVDLGEFMAETKK
        MSVEILD ATIVNFVED+EAF   IRERFSHLD+DRDG L YGEML+ELQSLRVFETHFGID K DP+ELSSVY SLFLQFDRDCNGKVDLGEFMAETKK
Subjt:  MSVEILDGATIVNFVEDDEAFGATIRERFSHLDIDRDGALSYGEMLRELQSLRVFETHFGIDAKLDPDELSSVYGSLFLQFDRDCNGKVDLGEFMAETKK

Query:  MMLAMANGIGLSPVQMLLEENSFLKKAVDRESTKVVAA
        MMLAMANGIGLSPVQMLLEENSFLKKAVDRESTK+ AA
Subjt:  MMLAMANGIGLSPVQMLLEENSFLKKAVDRESTKVVAA

A0A6J1EXF9 uncharacterized protein LOC1114370611.0e-5987.59Show/hide
Query:  MSVEILDGATIVNFVEDDEAFGATIRERFSHLDIDRDGALSYGEMLRELQSLRVFETHFGIDAKLDPDELSSVYGSLFLQFDRDCNGKVDLGEFMAETKK
        MSVEILD ATIVNFVEDDE FGA +RERFSHLDID DG LSY EMLRELQSLRVFETHFGID K DPDELSSVYGSLFLQFDRDC+GKVD+GEFM ETKK
Subjt:  MSVEILDGATIVNFVEDDEAFGATIRERFSHLDIDRDGALSYGEMLRELQSLRVFETHFGIDAKLDPDELSSVYGSLFLQFDRDCNGKVDLGEFMAETKK

Query:  MMLAMANGIGLSPVQMLLEENSFLKKAVDRESTKVVA
        MM+AMANGIG SPVQM+LEENSFLKKAV+RESTKV A
Subjt:  MMLAMANGIGLSPVQMLLEENSFLKKAVDRESTKVVA

A0A6J1JEK7 uncharacterized protein LOC1114862005.1e-5987.59Show/hide
Query:  MSVEILDGATIVNFVEDDEAFGATIRERFSHLDIDRDGALSYGEMLRELQSLRVFETHFGIDAKLDPDELSSVYGSLFLQFDRDCNGKVDLGEFMAETKK
        MSVEILDGATIVNFVEDDE FGA +RERFSHLDID DG LSY EMLRELQSLRVFETHFGID K DPDELSSVYGSLFLQFDRD +GKVD+GEFM ETKK
Subjt:  MSVEILDGATIVNFVEDDEAFGATIRERFSHLDIDRDGALSYGEMLRELQSLRVFETHFGIDAKLDPDELSSVYGSLFLQFDRDCNGKVDLGEFMAETKK

Query:  MMLAMANGIGLSPVQMLLEENSFLKKAVDRESTKVVA
        MM+AMANGIGLSPVQM+LEENS LKKAV+RESTKV A
Subjt:  MMLAMANGIGLSPVQMLLEENSFLKKAVDRESTKVVA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G54530.1 Calcium-binding EF hand family protein3.3e-1030.23Show/hide
Query:  ILDGATIVNFVEDDEAFGATIRERFSHLDIDRDGALSYGEMLRELQSLRVFETHFGIDAKLDP-DELSSVYGSLFLQFDRDCNGKVDLGEFMAETKKMML
        ++   T++ F+ D ++F +   + F  LD+D++G LS  E+ + L ++        +++++ P DE  +VY ++F +F  D   K +  + +AE   ++ 
Subjt:  ILDGATIVNFVEDDEAFGATIRERFSHLDIDRDGALSYGEMLRELQSLRVFETHFGIDAKLDP-DELSSVYGSLFLQFDRDCNGKVDLGEFMAETKKMML

Query:  AMANGIGLSPVQMLLEENSFLKKAVDRES
        AMA GIG SPV M++  +  + KAV  ES
Subjt:  AMANGIGLSPVQMLLEENSFLKKAVDRES

AT2G44310.1 Calcium-binding EF-hand family protein2.0e-3144.29Show/hide
Query:  MSVEILDGATIVNFVEDDEAFGATIRERFSHLDIDRDGALSYGEMLRELQSLRVFETHFGIDAKLDPDELSSVYGSLFLQFDRDCNGKVDLGEFMAETKK
        M V ++DG+T+ +FV+D+E F  ++ ERF+ LD+++DG LS  E+ +  +S+R+ E+HFG+D     DEL+++Y S+F +FD D +G VDL EF +E KK
Subjt:  MSVEILDGATIVNFVEDDEAFGATIRERFSHLDIDRDGALSYGEMLRELQSLRVFETHFGIDAKLDPDELSSVYGSLFLQFDRDCNGKVDLGEFMAETKK

Query:  MMLAMANGIGLSPVQMLL--EENSFLKKAVDRESTKVVAA
        ++LA+A+G+G  P+ M+L  ++++FLKKA D E++K+  A
Subjt:  MMLAMANGIGLSPVQMLL--EENSFLKKAVDRESTKVVAA

AT4G38810.2 Calcium-binding EF-hand family protein3.1e-0826.4Show/hide
Query:  EILDGATIVNFVEDDEAFGATIRERFSHLDIDRDGALSYGEMLRELQSLRVFETHFGIDAKLDPDELSSVYGSLFLQFDRDCNGKVDLGEFMAETKKMML
        ++LDG+ IV  VE+++ F   + ++F  LD D DG LS  E+   +  +       G+ A+    +   +Y  +  +F      KV   EF      ++L
Subjt:  EILDGATIVNFVEDDEAFGATIRERFSHLDIDRDGALSYGEMLRELQSLRVFETHFGIDAKLDPDELSSVYGSLFLQFDRDCNGKVDLGEFMAETKKMML

Query:  AMANGIGLSPVQMLLEENSFLKKAV
         MA G+   P+ +L  +   L + V
Subjt:  AMANGIGLSPVQMLLEENSFLKKAV

AT5G28830.1 calcium-binding EF hand family protein4.6e-0421.49Show/hide
Query:  VEILDGATIVNFVEDDEAFGATIRERFSHLDIDRDGALSYGEMLRELQSLRVFETHFGIDAKLDPDELSSVYGSLFLQFDRDCNGKVDLGEFMAETKKMM
        V ILDG  +  F+ED++ F       F+ LD +  G L   E+ + L        H G++  + P     +   +  + D D + ++   +F    ++++
Subjt:  VEILDGATIVNFVEDDEAFGATIRERFSHLDIDRDGALSYGEMLRELQSLRVFETHFGIDAKLDPDELSSVYGSLFLQFDRDCNGKVDLGEFMAETKKMM

Query:  LAMANGIGLSPVQMLLEENSF
          +A+ +   P+ ++L    F
Subjt:  LAMANGIGLSPVQMLLEENSF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGTAGAAATTTTGGATGGTGCCACCATTGTCAACTTCGTGGAAGACGATGAAGCTTTTGGTGCAACAATTAGAGAGCGTTTCAGTCACCTCGACATCGATAGAGA
CGGCGCTCTATCGTATGGAGAGATGTTGAGAGAGTTGCAGAGTCTTAGAGTGTTCGAGACTCATTTCGGAATCGATGCGAAACTCGATCCGGACGAGCTTTCTTCGGTTT
ACGGATCGTTATTTTTGCAGTTCGATCGGGATTGCAATGGAAAAGTTGATCTAGGTGAGTTCATGGCAGAAACCAAGAAGATGATGCTGGCCATGGCCAATGGAATAGGG
CTTTCGCCGGTTCAAATGTTGTTGGAAGAAAATAGTTTTTTGAAGAAAGCAGTGGACAGAGAATCTACCAAAGTTGTAGCTGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTGTAGAAATTTTGGATGGTGCCACCATTGTCAACTTCGTGGAAGACGATGAAGCTTTTGGTGCAACAATTAGAGAGCGTTTCAGTCACCTCGACATCGATAGAGA
CGGCGCTCTATCGTATGGAGAGATGTTGAGAGAGTTGCAGAGTCTTAGAGTGTTCGAGACTCATTTCGGAATCGATGCGAAACTCGATCCGGACGAGCTTTCTTCGGTTT
ACGGATCGTTATTTTTGCAGTTCGATCGGGATTGCAATGGAAAAGTTGATCTAGGTGAGTTCATGGCAGAAACCAAGAAGATGATGCTGGCCATGGCCAATGGAATAGGG
CTTTCGCCGGTTCAAATGTTGTTGGAAGAAAATAGTTTTTTGAAGAAAGCAGTGGACAGAGAATCTACCAAAGTTGTAGCTGCTTGA
Protein sequenceShow/hide protein sequence
MSVEILDGATIVNFVEDDEAFGATIRERFSHLDIDRDGALSYGEMLRELQSLRVFETHFGIDAKLDPDELSSVYGSLFLQFDRDCNGKVDLGEFMAETKKMMLAMANGIG
LSPVQMLLEENSFLKKAVDRESTKVVAA