CuGenDBv2

Gene ID	Spg006214
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Transposon TX1 uncharacterized 149 kDa protein
Genome location	scaffold4:3113893..3117997
RNA-Seq Expression	Spg006214
Synteny	Spg006214
Gene Ontology terms	GO:0050789 - regulation of biological process (biological process)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

CAN69126.1 hypothetical protein VITISV_008195 [Vitis vinifera]

7.3e-32

40.44

Show/hide

Query:  LDRITSDHYPISLSLGKNRWGPSPFRFHNVWLTHQSFSATVDQWWKASPSFGWPGHGFIQKLKGLKKELKLWNQTVFGNQKDQRDRLSRELSVIDSKEDR
        L R TSDH+PI L     +WGP+PFRF N+WL H SF     +WW      GW GH F++KL+ +K +LK WN+T FG    ++  +   L+  DS E  
Subjt:  LDRITSDHYPISLSLGKNRWGPSPFRFHNVWLTHQSFSATVDQWWKASPSFGWPGHGFIQKLKGLKKELKLWNQTVFGNQKDQRDRLSRELSVIDSKEDR

Query:  GEISEQDISRRTSIKAELFSLAVNEEIMWRQRCKSKWFMEGDVNSAFFHRLVAANRRKCSIHEI--LSVMAMERPHAEKGKIL
        G +S++ + +R   K EL  L + EEI WRQ+ + KW  EGD NS FFH++    R +  I E+   S + +  P + K +IL
Subjt:  GEISEQDISRRTSIKAELFSLAVNEEIMWRQRCKSKWFMEGDVNSAFFHRLVAANRRKCSIHEI--LSVMAMERPHAEKGKIL

RVW35206.1 hypothetical protein CK203_101901 [Vitis vinifera]

2.5e-32

40.35

Show/hide

Query:  WYVSARRLDRITSDHYPISLSLGKNRWGPSPFRFHNVWLTHQSFSATVDQWWKASPSFGWPGHGFIQKLKGLKKELKLWNQTVFGNQKDQRDRLSRELSV
        W +    L R TSDH+PI L     +WGP+PFRF N+WL H SF     +WW+     GW GH F++KL+ +K +LK+WN+  FG    +++ +  +L  
Subjt:  WYVSARRLDRITSDHYPISLSLGKNRWGPSPFRFHNVWLTHQSFSATVDQWWKASPSFGWPGHGFIQKLKGLKKELKLWNQTVFGNQKDQRDRLSRELSV

Query:  IDSKEDRGEISEQDISRRTSIKAELFSLAVNEEIMWRQRCKSKWFMEGDVNSAFFHRLVAANRRKCSIHEI
         DS E  G +S + +++R   K EL  L + EEI WRQ+ + KW  EGD NS FFH++    R +  I E+
Subjt:  IDSKEDRGEISEQDISRRTSIKAELFSLAVNEEIMWRQRCKSKWFMEGDVNSAFFHRLVAANRRKCSIHEI

RVW90400.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]

7.3e-32

40.44

Show/hide

Query:  LDRITSDHYPISLSLGKNRWGPSPFRFHNVWLTHQSFSATVDQWWKASPSFGWPGHGFIQKLKGLKKELKLWNQTVFGNQKDQRDRLSRELSVIDSKEDR
        L R TSDH+PI L     +WGP+PFRF N+WL H SF     +WW      GW GH F++KL+ +K +LK WN+T FG    ++  +   L+  DS E  
Subjt:  LDRITSDHYPISLSLGKNRWGPSPFRFHNVWLTHQSFSATVDQWWKASPSFGWPGHGFIQKLKGLKKELKLWNQTVFGNQKDQRDRLSRELSVIDSKEDR

Query:  GEISEQDISRRTSIKAELFSLAVNEEIMWRQRCKSKWFMEGDVNSAFFHRLVAANRRKCSIHEI--LSVMAMERPHAEKGKIL
        G +S + + +R   K EL  L + EEI WRQ+ + KW  EGD NS FFH++    R +  I E+   S + +  P + K +IL
Subjt:  GEISEQDISRRTSIKAELFSLAVNEEIMWRQRCKSKWFMEGDVNSAFFHRLVAANRRKCSIHEI--LSVMAMERPHAEKGKIL

RVW91038.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]

7.3e-32

40.44

Show/hide

Query:  LDRITSDHYPISLSLGKNRWGPSPFRFHNVWLTHQSFSATVDQWWKASPSFGWPGHGFIQKLKGLKKELKLWNQTVFGNQKDQRDRLSRELSVIDSKEDR
        L R TSDH+PI L     +WGP+PFRF N+WL H SF     +WW      GW GH F++KL+ +K +LK WN+T FG    ++  +   L+  DS E  
Subjt:  LDRITSDHYPISLSLGKNRWGPSPFRFHNVWLTHQSFSATVDQWWKASPSFGWPGHGFIQKLKGLKKELKLWNQTVFGNQKDQRDRLSRELSVIDSKEDR

Query:  GEISEQDISRRTSIKAELFSLAVNEEIMWRQRCKSKWFMEGDVNSAFFHRLVAANRRKCSIHEI--LSVMAMERPHAEKGKIL
        G +S++ + +R   K EL  L + EEI WRQ+ + KW  EGD NS FFH++    R +  I E+   S + +  P + K +IL
Subjt:  GEISEQDISRRTSIKAELFSLAVNEEIMWRQRCKSKWFMEGDVNSAFFHRLVAANRRKCSIHEI--LSVMAMERPHAEKGKIL

XP_022158956.1 uncharacterized protein LOC111025405 [Momordica charantia]

2.2e-36

44.38

Show/hide

Query:  ARRLDRITSDHYPISLSLGKNRWGPSPFRFHNVWLTHQSFSATVDQWWKASPSFGWPGHGFIQKLKGLKKELKLWNQTVFGNQKDQRDRLSRELSVIDSK
        A+R+ R TSDH+PI L  G+N WG +PFRF N+WL+H++F   ++ WW   P  GWPGHG + KLK LK  +KLW    F     Q++ L+  ++ +D  
Subjt:  ARRLDRITSDHYPISLSLGKNRWGPSPFRFHNVWLTHQSFSATVDQWWKASPSFGWPGHGFIQKLKGLKKELKLWNQTVFGNQKDQRDRLSRELSVIDSK

Query:  EDRGEISEQDISRRTSIKAELFSLAVNEEIMWRQRCKSKWFMEGDVNSAFFHRLVAANRRKCSIHEILS
        E    ++      R   K +L S+   EE  WRQRCK KW  EGD N+ FFHR +A  RR+  I EILS
Subjt:  EDRGEISEQDISRRTSIKAELFSLAVNEEIMWRQRCKSKWFMEGDVNSAFFHRLVAANRRKCSIHEILS

TrEMBL top hits

e value

%identity

Alignment

A0A438DIM3 Uncharacterized protein

1.2e-32

40.35

Show/hide

Query:  WYVSARRLDRITSDHYPISLSLGKNRWGPSPFRFHNVWLTHQSFSATVDQWWKASPSFGWPGHGFIQKLKGLKKELKLWNQTVFGNQKDQRDRLSRELSV
        W +    L R TSDH+PI L     +WGP+PFRF N+WL H SF     +WW+     GW GH F++KL+ +K +LK+WN+  FG    +++ +  +L  
Subjt:  WYVSARRLDRITSDHYPISLSLGKNRWGPSPFRFHNVWLTHQSFSATVDQWWKASPSFGWPGHGFIQKLKGLKKELKLWNQTVFGNQKDQRDRLSRELSV

Query:  IDSKEDRGEISEQDISRRTSIKAELFSLAVNEEIMWRQRCKSKWFMEGDVNSAFFHRLVAANRRKCSIHEI
         DS E  G +S + +++R   K EL  L + EEI WRQ+ + KW  EGD NS FFH++    R +  I E+
Subjt:  IDSKEDRGEISEQDISRRTSIKAELFSLAVNEEIMWRQRCKSKWFMEGDVNSAFFHRLVAANRRKCSIHEI

A0A438FW30 Transposon TX1 uncharacterized 149 kDa protein

3.6e-32

39.77

Show/hide

Query:  LDRITSDHYPISLSLGKNRWGPSPFRFHNVWLTHQSFSATVDQWWKASPSFGWPGHGFIQKLKGLKKELKLWNQTVFGNQKDQRDRLSRELSVIDSKEDR
        L R TSDH+PI +      WGP+PFRF N+WL H +F      WW      GW GH F+++L+ +K +LK WN++ FG  K+++  +  +L+  D+ E  
Subjt:  LDRITSDHYPISLSLGKNRWGPSPFRFHNVWLTHQSFSATVDQWWKASPSFGWPGHGFIQKLKGLKKELKLWNQTVFGNQKDQRDRLSRELSVIDSKEDR

Query:  GEISEQDISRRTSIKAELFSLAVNEEIMWRQRCKSKWFMEGDVNSAFFHRLVAANRRKCSIHEILSVMAMERPHAE
        G ++   IS+R S K EL  L + EEI WRQ+ K KW  EGD NS F+H++  A R +  I E+ +   +   +AE
Subjt:  GEISEQDISRRTSIKAELFSLAVNEEIMWRQRCKSKWFMEGDVNSAFFHRLVAANRRKCSIHEILSVMAMERPHAE

A0A438I2T6 Transposon TX1 uncharacterized 149 kDa protein

3.6e-32

40.44

Show/hide

Query:  LDRITSDHYPISLSLGKNRWGPSPFRFHNVWLTHQSFSATVDQWWKASPSFGWPGHGFIQKLKGLKKELKLWNQTVFGNQKDQRDRLSRELSVIDSKEDR
        L R TSDH+PI L     +WGP+PFRF N+WL H SF     +WW      GW GH F++KL+ +K +LK WN+T FG    ++  +   L+  DS E  
Subjt:  LDRITSDHYPISLSLGKNRWGPSPFRFHNVWLTHQSFSATVDQWWKASPSFGWPGHGFIQKLKGLKKELKLWNQTVFGNQKDQRDRLSRELSVIDSKEDR

Query:  GEISEQDISRRTSIKAELFSLAVNEEIMWRQRCKSKWFMEGDVNSAFFHRLVAANRRKCSIHEI--LSVMAMERPHAEKGKIL
        G +S++ + +R   K EL  L + EEI WRQ+ + KW  EGD NS FFH++    R +  I E+   S + +  P + K +IL
Subjt:  GEISEQDISRRTSIKAELFSLAVNEEIMWRQRCKSKWFMEGDVNSAFFHRLVAANRRKCSIHEI--LSVMAMERPHAEKGKIL

A0A6J1E2G6 uncharacterized protein LOC111025405

1.1e-36

44.38

Show/hide

Query:  ARRLDRITSDHYPISLSLGKNRWGPSPFRFHNVWLTHQSFSATVDQWWKASPSFGWPGHGFIQKLKGLKKELKLWNQTVFGNQKDQRDRLSRELSVIDSK
        A+R+ R TSDH+PI L  G+N WG +PFRF N+WL+H++F   ++ WW   P  GWPGHG + KLK LK  +KLW    F     Q++ L+  ++ +D  
Subjt:  ARRLDRITSDHYPISLSLGKNRWGPSPFRFHNVWLTHQSFSATVDQWWKASPSFGWPGHGFIQKLKGLKKELKLWNQTVFGNQKDQRDRLSRELSVIDSK

Query:  EDRGEISEQDISRRTSIKAELFSLAVNEEIMWRQRCKSKWFMEGDVNSAFFHRLVAANRRKCSIHEILS
        E    ++      R   K +L S+   EE  WRQRCK KW  EGD N+ FFHR +A  RR+  I EILS
Subjt:  EDRGEISEQDISRRTSIKAELFSLAVNEEIMWRQRCKSKWFMEGDVNSAFFHRLVAANRRKCSIHEILS

A5AK27 Reverse transcriptase domain-containing protein

3.6e-32

40.44

Show/hide

Query:  LDRITSDHYPISLSLGKNRWGPSPFRFHNVWLTHQSFSATVDQWWKASPSFGWPGHGFIQKLKGLKKELKLWNQTVFGNQKDQRDRLSRELSVIDSKEDR
        L R TSDH+PI L     +WGP+PFRF N+WL H SF     +WW      GW GH F++KL+ +K +LK WN+T FG    ++  +   L+  DS E  
Subjt:  LDRITSDHYPISLSLGKNRWGPSPFRFHNVWLTHQSFSATVDQWWKASPSFGWPGHGFIQKLKGLKKELKLWNQTVFGNQKDQRDRLSRELSVIDSKEDR

Query:  GEISEQDISRRTSIKAELFSLAVNEEIMWRQRCKSKWFMEGDVNSAFFHRLVAANRRKCSIHEI--LSVMAMERPHAEKGKIL
        G +S++ + +R   K EL  L + EEI WRQ+ + KW  EGD NS FFH++    R +  I E+   S + +  P + K +IL
Subjt:  GEISEQDISRRTSIKAELFSLAVNEEIMWRQRCKSKWFMEGDVNSAFFHRLVAANRRKCSIHEI--LSVMAMERPHAEKGKIL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G43760.1 DNAse I-like superfamily protein

3.5e-08

27.85

Show/hide

Query:  SDHYPISLSL-GKNRWGPSPFRFHNVWLTHQSFSATVDQWWKASPSFGWPGHGFIQKLKGLKKELKLWNQTVFGN----QKDQRDRLSRELSVIDSKEDR
        SDH P  + L    +     FR+ +   TH +F  ++   W+     G       + LK  KK  KL N+  FGN     K+  D L    S + +    
Subjt:  SDHYPISLSL-GKNRWGPSPFRFHNVWLTHQSFSATVDQWWKASPSFGWPGHGFIQKLKGLKKELKLWNQTVFGN----QKDQRDRLSRELSVIDSKEDR

Query:  GEISEQDISRRTSIKAELFSLAVNEEIMWRQRCKSKWFMEGDVNSAFFHRLVAANRRK
             + ++R+   K   F+ A+  E  +RQ+ + KW  +GD N+ FFH+++ AN+ K
Subjt:  GEISEQDISRRTSIKAELFSLAVNEEIMWRQRCKSKWFMEGDVNSAFFHRLVAANRRK

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAACCCAAATCCCCAAAATCCTCGTCCACAAGCCACCAACCAGCCTCCAGTAAACCCCAAAATAGTCAGCAACCTATCCTTCATTCCCAGTCCTCCCAATACCGTGT
TAACAGGCCCACTCACAAAAGCCCAAACCCGCCAATCCCCCACCAACAAAGCTCTCCCCAAAGGCCCAATCCACCCCATGAAAACCTGCAAGATAGGAAAAAGCCCATTA
TGATCAACAATAAAAAGACCTATCTTCTCACTGGTACTGTACACTCCACCAACACCGAACTCCCCATATCCGATTCGGAAGGCTCTTCCCCTTGCACGACAGCCATGGTT
GACTCCCCATCTCAGAACCACCATAAAGCCATTATCCAAGCAGCTTCCCCACCAACTATCCGCAACCTCTTCGAGCCACAAGTTGACGAACGACCATATCTCGAAGAACC
TATCCCCCTGCGTAGGGAAGAACCCACTTATCCGCACAACCAGAACCACAAAACTGCTCTCACCGAAGTGGAAATAGAAGAAGAAGAGTCCAACGAAGATTGGAAAAATG
ATCCTGACGAAACTGACCCGGTGGTCTACTTGCCCTACCTTTTCCCTTGGTTAGCTGAGCATGGAATGTGTATCATGCCAATGCCGGGGCGACACAAGACCTCAAGTGCC
ACAAAGAAGAAGGCTAAATGGTATGTCTCAGCCCGTAGGCTTGATCGAATCACCTCAGACCACTACCCCATCAGCCTCTCATTGGGTAAAAATCGTTGGGGCCCATCTCC
CTTTAGATTCCACAATGTTTGGCTCACCCACCAATCCTTTTCTGCCACAGTCGATCAATGGTGGAAAGCATCTCCTTCTTTCGGGTGGCCAGGGCATGGGTTCATCCAAA
AACTAAAAGGCCTTAAGAAAGAGCTCAAGCTATGGAACCAGACAGTGTTTGGCAATCAAAAGGATCAGCGTGATAGACTGAGCAGAGAACTCTCTGTCATTGACTCGAAA
GAAGACAGAGGAGAGATATCCGAACAAGACATATCCAGAAGAACAAGCATCAAGGCAGAATTGTTCTCTTTAGCAGTTAATGAGGAAATCATGTGGCGCCAAAGATGTAA
GTCAAAGTGGTTTATGGAAGGGGATGTTAACTCAGCTTTTTTTCACCGCTTGGTTGCTGCAAATCGCCGAAAGTGCTCCATTCATGAGATTTTATCAGTCATGGCTATGG
AAAGGCCCCATGCCGAAAAAGGTAAAATTCTTTCTATGGGAGCTCAGCCACGAATGTATAAATACAGCCGATCTCATACAAAGGAGAAATCCGGGGACAACCCTTTCCCT
AAATTGCTGCTGCCTATGTTACAAAGATTCAGAGTCTCAAGTCCATCTCTTCAGTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MEPKSPKSSSTSHQPASSKPQNSQQPILHSQSSQYRVNRPTHKSPNPPIPHQQSSPQRPNPPHENLQDRKKPIMINNKKTYLLTGTVHSTNTELPISDSEGSSPCTTAMV
DSPSQNHHKAIIQAASPPTIRNLFEPQVDERPYLEEPIPLRREEPTYPHNQNHKTALTEVEIEEEESNEDWKNDPDETDPVVYLPYLFPWLAEHGMCIMPMPGRHKTSSA
TKKKAKWYVSARRLDRITSDHYPISLSLGKNRWGPSPFRFHNVWLTHQSFSATVDQWWKASPSFGWPGHGFIQKLKGLKKELKLWNQTVFGNQKDQRDRLSRELSVIDSK
EDRGEISEQDISRRTSIKAELFSLAVNEEIMWRQRCKSKWFMEGDVNSAFFHRLVAANRRKCSIHEILSVMAMERPHAEKGKILSMGAQPRMYKYSRSHTKEKSGDNPFP
KLLLPMLQRFRVSSPSLQ

Spg006214 (gene) of Sponge gourd (cylindrica) v1 genome