; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg006217 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg006217
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionPolyamine-modulated factor 1/Kinetochore protein NNF
Genome locationscaffold4:3870307..3876638
RNA-Seq ExpressionSpg006217
SyntenySpg006217
Gene Ontology termsGO:0007049 - cell cycle (biological process)
GO:0007059 - chromosome segregation (biological process)
GO:0051301 - cell division (biological process)
GO:0000818 - nuclear MIS12/MIND complex (cellular component)
InterPro domainsIPR007128 - Nuclear MIS12/MIND complex subunit PMF1/Nnf1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7015109.1 hypothetical protein SDJN02_22742 [Cucurbita argyrosperma subsp. argyrosperma]3.7e-3782.35Show/hide
Query:  CVRFVGLILDNVEQLLEEQDLDPLYSKKTNIMDIANYQSMTKKNEIQHLKDTLKTAEEQNRHIQACIDVLRKGVQDASGMADAVEKLRNRCNAYATNGVD
        C   VGL+LDNVEQLLEEQDLDPLYSKKTNIM+IANY SMTKKNEIQHLKD LKTAEEQNRH+Q  ID+LRKGVQDAS M DAVEKLRNRC AYA +GV 
Subjt:  CVRFVGLILDNVEQLLEEQDLDPLYSKKTNIMDIANYQSMTKKNEIQHLKDTLKTAEEQNRHIQACIDVLRKGVQDASGMADAVEKLRNRCNAYATNGVD

Query:  GT
         T
Subjt:  GT

XP_022931290.1 uncharacterized protein LOC111437518 isoform X1 [Cucurbita moschata]1.1e-3684.69Show/hide
Query:  VGLILDNVEQLLEEQDLDPLYSKKTNIMDIANYQSMTKKNEIQHLKDTLKTAEEQNRHIQACIDVLRKGVQDASGMADAVEKLRNRCNAYATNGVDGT
        VGL+LDNVEQLLEEQDLDPLYSKKTNIM+IANY SMTKKNEIQHLKD LKTAEEQNRH+Q  ID+LRKGVQDAS M DAVEKLRNRC AYA +GV  T
Subjt:  VGLILDNVEQLLEEQDLDPLYSKKTNIMDIANYQSMTKKNEIQHLKDTLKTAEEQNRHIQACIDVLRKGVQDASGMADAVEKLRNRCNAYATNGVDGT

XP_022931291.1 uncharacterized protein LOC111437518 isoform X2 [Cucurbita moschata]4.8e-3760.9Show/hide
Query:  YDFGARISSSSFHSGYNFFAWKHRGNAPGLLTNCDHLLLALACKQLE------CVRF-VGLILDNVEQLLEEQDLDPLYSKKTNIMDIANYQSMTKKNEI
        ++ G  +SSS      +F     +     LLT+C   ++      +E      CV   VGL+LDNVEQLLEEQDLDPLYSKKTNIM+IANY SMTKKNEI
Subjt:  YDFGARISSSSFHSGYNFFAWKHRGNAPGLLTNCDHLLLALACKQLE------CVRF-VGLILDNVEQLLEEQDLDPLYSKKTNIMDIANYQSMTKKNEI

Query:  QHLKDTLKTAEEQNRHIQACIDVLRKGVQDASGMADAVEKLRNRCNAYATNGVDGT
        QHLKD LKTAEEQNRH+Q  ID+LRKGVQDAS M DAVEKLRNRC AYA +GV  T
Subjt:  QHLKDTLKTAEEQNRHIQACIDVLRKGVQDASGMADAVEKLRNRCNAYATNGVDGT

XP_022985333.1 uncharacterized protein LOC111483373 isoform X2 [Cucurbita maxima]6.3e-3760.9Show/hide
Query:  YDFGARISSSSFHSGYNFFAWKHRGNAPGLLTNCDHLLLALACKQLE------CVRF-VGLILDNVEQLLEEQDLDPLYSKKTNIMDIANYQSMTKKNEI
        ++ G  +SSS      +F     +     LLT+C   ++      +E      CV   VGL+LDNVEQLLEEQDLDPLYSKKTNIM+IANY SMTKKNEI
Subjt:  YDFGARISSSSFHSGYNFFAWKHRGNAPGLLTNCDHLLLALACKQLE------CVRF-VGLILDNVEQLLEEQDLDPLYSKKTNIMDIANYQSMTKKNEI

Query:  QHLKDTLKTAEEQNRHIQACIDVLRKGVQDASGMADAVEKLRNRCNAYATNGVDGT
        QHLKD LKTAEEQNRH+Q  ID+LRKGVQDAS M DAVEKLRNRC AYA +GV  T
Subjt:  QHLKDTLKTAEEQNRHIQACIDVLRKGVQDASGMADAVEKLRNRCNAYATNGVDGT

XP_023527503.1 uncharacterized protein LOC111790708 [Cucurbita pepo subsp. pepo]4.8e-3784Show/hide
Query:  VGLILDNVEQLLEEQDLDPLYSKKTNIMDIANYQSMTKKNEIQHLKDTLKTAEEQNRHIQACIDVLRKGVQDASGMADAVEKLRNRCNAYATNGVDGTCD
        VG +LDNVEQLLEEQDLDPLYSKKTNIMDIANY SMT+KNEIQHLKD LKT+EEQNRHIQA IDVL+KGV+DASGMADAVEKLR RC A  T+G +GTCD
Subjt:  VGLILDNVEQLLEEQDLDPLYSKKTNIMDIANYQSMTKKNEIQHLKDTLKTAEEQNRHIQACIDVLRKGVQDASGMADAVEKLRNRCNAYATNGVDGTCD

TrEMBL top hitse value%identityAlignment
A0A6J1ETA0 uncharacterized protein LOC111437518 isoform X22.3e-3760.9Show/hide
Query:  YDFGARISSSSFHSGYNFFAWKHRGNAPGLLTNCDHLLLALACKQLE------CVRF-VGLILDNVEQLLEEQDLDPLYSKKTNIMDIANYQSMTKKNEI
        ++ G  +SSS      +F     +     LLT+C   ++      +E      CV   VGL+LDNVEQLLEEQDLDPLYSKKTNIM+IANY SMTKKNEI
Subjt:  YDFGARISSSSFHSGYNFFAWKHRGNAPGLLTNCDHLLLALACKQLE------CVRF-VGLILDNVEQLLEEQDLDPLYSKKTNIMDIANYQSMTKKNEI

Query:  QHLKDTLKTAEEQNRHIQACIDVLRKGVQDASGMADAVEKLRNRCNAYATNGVDGT
        QHLKD LKTAEEQNRH+Q  ID+LRKGVQDAS M DAVEKLRNRC AYA +GV  T
Subjt:  QHLKDTLKTAEEQNRHIQACIDVLRKGVQDASGMADAVEKLRNRCNAYATNGVDGT

A0A6J1EZ15 uncharacterized protein LOC111437518 isoform X15.2e-3784.69Show/hide
Query:  VGLILDNVEQLLEEQDLDPLYSKKTNIMDIANYQSMTKKNEIQHLKDTLKTAEEQNRHIQACIDVLRKGVQDASGMADAVEKLRNRCNAYATNGVDGT
        VGL+LDNVEQLLEEQDLDPLYSKKTNIM+IANY SMTKKNEIQHLKD LKTAEEQNRH+Q  ID+LRKGVQDAS M DAVEKLRNRC AYA +GV  T
Subjt:  VGLILDNVEQLLEEQDLDPLYSKKTNIMDIANYQSMTKKNEIQHLKDTLKTAEEQNRHIQACIDVLRKGVQDASGMADAVEKLRNRCNAYATNGVDGT

A0A6J1IY03 uncharacterized protein LOC1114816541.2e-3683Show/hide
Query:  VGLILDNVEQLLEEQDLDPLYSKKTNIMDIANYQSMTKKNEIQHLKDTLKTAEEQNRHIQACIDVLRKGVQDASGMADAVEKLRNRCNAYATNGVDGTCD
        VG +LDNVEQLLEEQDLDPLYSKKTNIMDIA+Y S+TKKNEIQHLKD LKT+EEQNRHIQA IDVL+KGV+DASGMADAVEKLR RC A A +G +GTCD
Subjt:  VGLILDNVEQLLEEQDLDPLYSKKTNIMDIANYQSMTKKNEIQHLKDTLKTAEEQNRHIQACIDVLRKGVQDASGMADAVEKLRNRCNAYATNGVDGTCD

A0A6J1J4K9 uncharacterized protein LOC111483373 isoform X15.2e-3784.69Show/hide
Query:  VGLILDNVEQLLEEQDLDPLYSKKTNIMDIANYQSMTKKNEIQHLKDTLKTAEEQNRHIQACIDVLRKGVQDASGMADAVEKLRNRCNAYATNGVDGT
        VGL+LDNVEQLLEEQDLDPLYSKKTNIM+IANY SMTKKNEIQHLKD LKTAEEQNRH+Q  ID+LRKGVQDAS M DAVEKLRNRC AYA +GV  T
Subjt:  VGLILDNVEQLLEEQDLDPLYSKKTNIMDIANYQSMTKKNEIQHLKDTLKTAEEQNRHIQACIDVLRKGVQDASGMADAVEKLRNRCNAYATNGVDGT

A0A6J1JDB6 uncharacterized protein LOC111483373 isoform X23.1e-3760.9Show/hide
Query:  YDFGARISSSSFHSGYNFFAWKHRGNAPGLLTNCDHLLLALACKQLE------CVRF-VGLILDNVEQLLEEQDLDPLYSKKTNIMDIANYQSMTKKNEI
        ++ G  +SSS      +F     +     LLT+C   ++      +E      CV   VGL+LDNVEQLLEEQDLDPLYSKKTNIM+IANY SMTKKNEI
Subjt:  YDFGARISSSSFHSGYNFFAWKHRGNAPGLLTNCDHLLLALACKQLE------CVRF-VGLILDNVEQLLEEQDLDPLYSKKTNIMDIANYQSMTKKNEI

Query:  QHLKDTLKTAEEQNRHIQACIDVLRKGVQDASGMADAVEKLRNRCNAYATNGVDGT
        QHLKD LKTAEEQNRH+Q  ID+LRKGVQDAS M DAVEKLRNRC AYA +GV  T
Subjt:  QHLKDTLKTAEEQNRHIQACIDVLRKGVQDASGMADAVEKLRNRCNAYATNGVDGT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G19350.1 embryo defective 30061.6e-1754.44Show/hide
Query:  VGLILDNVEQLLEEQDLDPLYSKKTNIMDIANYQSMTKKNEIQHLKDTLKTAEEQNRHIQACIDVLRKGVQDASGMADAVEKLRNRCNAY
        VG ILD VE+L+EEQ LDPL+S KT++M IA   + +KKNEIQ L   L+ AEEQNR  +A I +L+K  QD SG AD +EKL    + Y
Subjt:  VGLILDNVEQLLEEQDLDPLYSKKTNIMDIANYQSMTKKNEIQHLKDTLKTAEEQNRHIQACIDVLRKGVQDASGMADAVEKLRNRCNAY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGATTTTCCCTTCGTTTCAGACCGGAATCGAAGGGGAATAGCAGCGCGAGGATAGAGCTTTCGTTGGAGAAGGAGGTGCTCGCCGGAGAGAAAGAAAACTGTGGGTC
TGGTCTTTGCGCGCGGTGGGTCTTCGCTTCACGCGTGAGATGTAGTCGGAGGGAGGAAGATTGCGTGCGGTTCGTTGGAGAAGGGGATCGAGAGGGAGGGCTGAACCAAG
AGTTAAATGTTAGCGTAGAATTTAGCAAGATAGGGTTGGGGATCGAAGTGGACAAACGTTTTGAACATGGAGAAGAAGCGCGAGATTGGTACTCCGGTGAGCTCAAGCCA
CATCGATCTGAAAAAGTCGTTCAGGCTCGCTGTTCGTTCTCTCCTCACTTCCTGTTCCAGGGAGGAGTTTCGGGAATGCTTTTCGAGATTTACGACTTCGGAGCAAGAAT
ATCTTCATCGTCTTTTCATTCAGGTTATAACTTCTTTGCATGGAAACATAGAGGTAATGCTCCTGGTTTGTTAACTAATTGTGATCATTTACTTTTAGCTCTTGCTTGCA
AGCAACTTGAATGTGTCAGATTCGTAGGACTTATACTTGATAATGTTGAACAACTTTTGGAAGAACAGGATCTAGACCCATTGTATTCTAAGAAGACTAATATAATGGAT
ATTGCTAATTATCAGTCCATGACAAAGAAGAATGAGATCCAGCACTTGAAGGACACGTTGAAAACGGCTGAGGAACAGAACCGGCATATTCAAGCCTGTATCGATGTCCT
CAGAAAAGGAGTGCAAGACGCCTCGGGCATGGCAGATGCTGTTGAGAAGCTAAGAAACAGATGCAATGCTTATGCAACTAATGGCGTCGACGGGACCTGCGATATGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGATTTTCCCTTCGTTTCAGACCGGAATCGAAGGGGAATAGCAGCGCGAGGATAGAGCTTTCGTTGGAGAAGGAGGTGCTCGCCGGAGAGAAAGAAAACTGTGGGTC
TGGTCTTTGCGCGCGGTGGGTCTTCGCTTCACGCGTGAGATGTAGTCGGAGGGAGGAAGATTGCGTGCGGTTCGTTGGAGAAGGGGATCGAGAGGGAGGGCTGAACCAAG
AGTTAAATGTTAGCGTAGAATTTAGCAAGATAGGGTTGGGGATCGAAGTGGACAAACGTTTTGAACATGGAGAAGAAGCGCGAGATTGGTACTCCGGTGAGCTCAAGCCA
CATCGATCTGAAAAAGTCGTTCAGGCTCGCTGTTCGTTCTCTCCTCACTTCCTGTTCCAGGGAGGAGTTTCGGGAATGCTTTTCGAGATTTACGACTTCGGAGCAAGAAT
ATCTTCATCGTCTTTTCATTCAGGTTATAACTTCTTTGCATGGAAACATAGAGGTAATGCTCCTGGTTTGTTAACTAATTGTGATCATTTACTTTTAGCTCTTGCTTGCA
AGCAACTTGAATGTGTCAGATTCGTAGGACTTATACTTGATAATGTTGAACAACTTTTGGAAGAACAGGATCTAGACCCATTGTATTCTAAGAAGACTAATATAATGGAT
ATTGCTAATTATCAGTCCATGACAAAGAAGAATGAGATCCAGCACTTGAAGGACACGTTGAAAACGGCTGAGGAACAGAACCGGCATATTCAAGCCTGTATCGATGTCCT
CAGAAAAGGAGTGCAAGACGCCTCGGGCATGGCAGATGCTGTTGAGAAGCTAAGAAACAGATGCAATGCTTATGCAACTAATGGCGTCGACGGGACCTGCGATATGTAA
Protein sequenceShow/hide protein sequence
MRFSLRFRPESKGNSSARIELSLEKEVLAGEKENCGSGLCARWVFASRVRCSRREEDCVRFVGEGDREGGLNQELNVSVEFSKIGLGIEVDKRFEHGEEARDWYSGELKP
HRSEKVVQARCSFSPHFLFQGGVSGMLFEIYDFGARISSSSFHSGYNFFAWKHRGNAPGLLTNCDHLLLALACKQLECVRFVGLILDNVEQLLEEQDLDPLYSKKTNIMD
IANYQSMTKKNEIQHLKDTLKTAEEQNRHIQACIDVLRKGVQDASGMADAVEKLRNRCNAYATNGVDGTCDM