CuGenDBv2

Gene ID	Spg006223
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Nuclear transcription factor Y subunit C
Genome location	scaffold4:3608183..3608974
RNA-Seq Expression	Spg006223
Synteny	Spg006223
Gene Ontology terms	GO:0045944 - positive regulation of transcription by RNA polymerase II (biological process) GO:0005634 - nucleus (cellular component) GO:0001228 - DNA-binding transcription activator activity, RNA polymerase II-specific (molecular function) GO:0003677 - DNA binding (molecular function) GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domains	IPR007125 - Histone H2A/H2B/H3 IPR009072 - Histone-fold

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004136852.1 nuclear transcription factor Y subunit C-2 [Cucumis sativus]

6.5e-134

96.6

Show/hide

Query:  MDQSER---QQQSQQPAGGVGAGQLSYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
        MDQSER   QQQSQQPAGGVGAGQL YSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
Subjt:  MDQSER---QQQSQQPAGGVGAGQLSYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKAS+PVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG

Query:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGAASQQPRPPMPFMPWPHTQTQQQQQTQQQSD
        SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGA +QQPRP MPFMPWPHTQ QQQQQTQQQSD
Subjt:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGAASQQPRPPMPFMPWPHTQTQQQQQTQQQSD

XP_022157652.1 nuclear transcription factor Y subunit C-2 [Momordica charantia]

6.8e-131

94.74

Show/hide

Query:  MDQSER---QQQSQQPAGGVGAGQLSYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
        MDQSER   QQQSQQPAGGVGAGQL YSNPY+T  MVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
Subjt:  MDQSER---QQQSQQPAGGVGAGQLSYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG

Query:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGAASQQPRPPMPFMPWPHTQTQQQQQTQQQSDA
        SPADLPYYYVP QHPV A GMIMGKQLDQANMYG  +QQPRPPMPFMPWPHTQ QQQQQTQQQSDA
Subjt:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGAASQQPRPPMPFMPWPHTQTQQQQQTQQQSDA

XP_022927856.1 nuclear transcription factor Y subunit C-2-like [Cucurbita moschata]

2.4e-128

93.31

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Query:  MDQSER---QQQSQQPAGGVGAGQLSYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
        MDQSER   QQQSQQ AGGVGAGQL YSNPYQTAPM ASGTPAITIPPTQ PSSFSNSPHQLA+QQAQHFH QQQQQQQQQLQ+FWANQMQEIEQTTDFK
Subjt:  MDQSER---QQQSQQPAGGVGAGQLSYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG

Query:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGAASQQPRPPMPFMPWPHTQT---QQQQQTQQQSDA
        SPADLPYYYVPSQHPV ATGMIMGKQLDQANMYGA +QQPRPP+PFMPWPHTQ    QQQQQTQQQSDA
Subjt:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGAASQQPRPPMPFMPWPHTQT---QQQQQTQQQSDA

XP_022988890.1 nuclear transcription factor Y subunit C-2-like [Cucurbita maxima]

8.3e-129

93.68

Show/hide

Query:  MDQSER---QQQSQQPAGGVGAGQLSYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
        MDQSER   QQQSQQ AGGVGAGQL YSNPYQTAPM ASGTPAITIPPTQ PSSFSNSPHQLA+QQAQHFH QQQQQQQQQLQMFWANQMQEIEQTTDFK
Subjt:  MDQSER---QQQSQQPAGGVGAGQLSYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG

Query:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGAASQQPRPPMPFMPWPHTQT---QQQQQTQQQSDA
        SPADLPYYYVPSQHPV ATGMIMGKQLDQANMYGA +QQPRPP+PFMPWPHTQ    QQQQQTQQQSDA
Subjt:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGAASQQPRPPMPFMPWPHTQT---QQQQQTQQQSDA

XP_038888434.1 nuclear transcription factor Y subunit C-2-like [Benincasa hispida]

2.1e-132

95.49

Show/hide

Query:  MDQSER---QQQSQQPAGGVGAGQLSYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
        MDQSER    QQSQQPAG VGAGQL YSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
Subjt:  MDQSER---QQQSQQPAGGVGAGQLSYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG

Query:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGAASQQPRPPMPFMPWPHTQTQQQQQTQQQSDA
        SPADLPYYYVPSQHPVGATGMIMGKQLDQ NMYG  +QQPRP MPFMPWPHTQ QQQQQTQQQSDA
Subjt:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGAASQQPRPPMPFMPWPHTQTQQQQQTQQQSDA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K5U1 Histone domain-containing protein

3.2e-134

96.6

Show/hide

Query:  MDQSER---QQQSQQPAGGVGAGQLSYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
        MDQSER   QQQSQQPAGGVGAGQL YSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
Subjt:  MDQSER---QQQSQQPAGGVGAGQLSYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKAS+PVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG

Query:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGAASQQPRPPMPFMPWPHTQTQQQQQTQQQSD
        SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGA +QQPRP MPFMPWPHTQ QQQQQTQQQSD
Subjt:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGAASQQPRPPMPFMPWPHTQTQQQQQTQQQSD

A0A1S3C190 nuclear transcription factor Y subunit C-2

3.2e-134

96.6

Show/hide

Query:  MDQSER---QQQSQQPAGGVGAGQLSYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
        MDQSER   QQQSQQPAGGVGAGQL YSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
Subjt:  MDQSER---QQQSQQPAGGVGAGQLSYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKAS+PVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG

Query:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGAASQQPRPPMPFMPWPHTQTQQQQQTQQQSD
        SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGA +QQPRP MPFMPWPHTQ QQQQQTQQQSD
Subjt:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGAASQQPRPPMPFMPWPHTQTQQQQQTQQQSD

A0A5A7SLP2 Nuclear transcription factor Y subunit C-2

3.2e-134

96.6

Show/hide

Query:  MDQSER---QQQSQQPAGGVGAGQLSYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
        MDQSER   QQQSQQPAGGVGAGQL YSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
Subjt:  MDQSER---QQQSQQPAGGVGAGQLSYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKAS+PVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG

Query:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGAASQQPRPPMPFMPWPHTQTQQQQQTQQQSD
        SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGA +QQPRP MPFMPWPHTQ QQQQQTQQQSD
Subjt:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGAASQQPRPPMPFMPWPHTQTQQQQQTQQQSD

A0A6J1DV19 nuclear transcription factor Y subunit C-2

3.3e-131

94.74

Show/hide

Query:  MDQSER---QQQSQQPAGGVGAGQLSYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
        MDQSER   QQQSQQPAGGVGAGQL YSNPY+T  MVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
Subjt:  MDQSER---QQQSQQPAGGVGAGQLSYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG

Query:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGAASQQPRPPMPFMPWPHTQTQQQQQTQQQSDA
        SPADLPYYYVP QHPV A GMIMGKQLDQANMYG  +QQPRPPMPFMPWPHTQ QQQQQTQQQSDA
Subjt:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGAASQQPRPPMPFMPWPHTQTQQQQQTQQQSDA

A0A6J1JII4 nuclear transcription factor Y subunit C-2-like

4.0e-129

93.68

Show/hide

Query:  MDQSER---QQQSQQPAGGVGAGQLSYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
        MDQSER   QQQSQQ AGGVGAGQL YSNPYQTAPM ASGTPAITIPPTQ PSSFSNSPHQLA+QQAQHFH QQQQQQQQQLQMFWANQMQEIEQTTDFK
Subjt:  MDQSER---QQQSQQPAGGVGAGQLSYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG

Query:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGAASQQPRPPMPFMPWPHTQT---QQQQQTQQQSDA
        SPADLPYYYVPSQHPV ATGMIMGKQLDQANMYGA +QQPRPP+PFMPWPHTQ    QQQQQTQQQSDA
Subjt:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGAASQQPRPPMPFMPWPHTQT---QQQQQTQQQSDA

SwissProt top hits

e value

%identity

Alignment

Q655V5 Nuclear transcription factor Y subunit C-4

1.5e-64

Show/hide

Query:  QPAGGVGAGQLSYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSP------HQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLAR
        QPA GV AG       Y+ A  V +  PA+    +QP  SF  +P      HQL YQQAQ FH Q QQQQQ+QLQ FWA ++ +IEQTTDFKNHSLPLAR
Subjt:  QPAGGVGAGQLSYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSP------HQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLAR

Query:  IKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPAD-LPY
        IKKIMKADEDVRMISAEAPVIFAKACE+FILELTLRSW+HTEENKRRTLQKNDIAAAI+RTD++DFLVDI+PRD+LKEEG+G+ +A +P +G PAD  PY
Subjt:  IKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPAD-LPY

Query:  -YYVPSQHPVGATGMIMGKQLDQANMYGAASQQPRPPMPFMPWPHTQTQQQQ-QTQQQSD
         YYVP Q   GA G+  G Q                  P   W   Q QQ++   +QQSD
Subjt:  -YYVPSQHPVGATGMIMGKQLDQANMYGAASQQPRPPMPFMPWPHTQTQQQQ-QTQQQSD

Q8L4B2 Nuclear transcription factor Y subunit C-9

6.1e-58

58.06

Show/hide

Query:  AGQLSY-SNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQ--QQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADED
        +G ++Y +NPYQT PM    T A T+      +  +  P QLA+ Q     HQQQQQQQ  QQLQ FW NQ +EIE+TTDFKNHSLPLARIKKIMKADED
Subjt:  AGQLSY-SNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQ--QQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADED

Query:  VRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASIPVVGSPADLPYYYVPS-QHPV
        VRMISAEAPV+FA+ACEMFILELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E LG I + ++P   + A  PY Y+P+   P+
Subjt:  VRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASIPVVGSPADLPYYYVPS-QHPV

Query:  GATGMIMGKQLDQANMYGAASQQPRPPMPFMPWPHTQTQQQQQTQQQS
        G  GM+MG      N  GA      PP P+M  P  Q Q   Q  Q++
Subjt:  GATGMIMGKQLDQANMYGAASQQPRPPMPFMPWPHTQTQQQQQTQQQS

Q8LCG7 Nuclear transcription factor Y subunit C-2

1.1e-67

70.42

Show/hide

Query:  MDQSERQQQSQQPAGGVGAGQLSYSNP--YQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKN
        M+QSE  QQ QQ       G + Y  P  YQ+ P+                    N+   +A+QQA HFHH  QQQQQQQLQMFWANQMQEIE TTDFKN
Subjt:  MDQSERQQQSQQPAGGVGAGQLSYSNP--YQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKN

Query:  HSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIP-VVG
        H+LPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLR+WIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG+TK +IP VVG
Subjt:  HSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIP-VVG

Query:  SPADLPYYYVPSQ
        SP   PYYY+  Q
Subjt:  SPADLPYYYVPSQ

Q9SMP0 Nuclear transcription factor Y subunit C-1

9.1e-54

61.75

Show/hide

Query:  AITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELT
        A  IPP  P ++ S +    +Y       H   QQQQQQLQ+FW  Q QEIEQ  DFKNH LPLARIKKIMKADEDVRMISAEAP++FAKACE+FILELT
Subjt:  AITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELT

Query:  LRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPVGATGMIMGK
        +RSW+H EENKRRTLQKNDIAAAI+RTD+FDFLVDI+PRDE+K+E   +    + V  + + +PYYY P   P G  GM++G+
Subjt:  LRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPVGATGMIMGK

Q9ZVL3 Nuclear transcription factor Y subunit C-3

2.9e-52

54.69

Show/hide

Query:  QQSQQPAGGVGAGQLSYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIK
        QQ Q  A   G      SNPYQT  M            T P  S   + HQ+        H QQQQQ  QQLQ FW  Q +EIE+TTDFKNHSLPLARIK
Subjt:  QQSQQPAGGVGAGQLSYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIK

Query:  KIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADLPYYYV
        KIMKADEDVRMISAEAPV+FA+ACEMFILELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E LG   A      + A  PY Y+
Subjt:  KIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADLPYYYV

Query:  -PSQHPVGATGMIMGKQLDQANMYGAASQQPRPPMPFMPWPHTQTQQQQQTQQQSD
         P   P+G  GM+MG         GA      PP P+M  P    QQ    QQ  D
Subjt:  -PSQHPVGATGMIMGKQLDQANMYGAASQQPRPPMPFMPWPHTQTQQQQQTQQQSD

Arabidopsis top hits

e value

%identity

Alignment

AT1G08970.1 nuclear factor Y, subunit C9

4.3e-59

58.06

Show/hide

Query:  AGQLSY-SNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQ--QQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADED
        +G ++Y +NPYQT PM    T A T+      +  +  P QLA+ Q     HQQQQQQQ  QQLQ FW NQ +EIE+TTDFKNHSLPLARIKKIMKADED
Subjt:  AGQLSY-SNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQ--QQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADED

Query:  VRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASIPVVGSPADLPYYYVPS-QHPV
        VRMISAEAPV+FA+ACEMFILELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E LG I + ++P   + A  PY Y+P+   P+
Subjt:  VRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASIPVVGSPADLPYYYVPS-QHPV

Query:  GATGMIMGKQLDQANMYGAASQQPRPPMPFMPWPHTQTQQQQQTQQQS
        G  GM+MG      N  GA      PP P+M  P  Q Q   Q  Q++
Subjt:  GATGMIMGKQLDQANMYGAASQQPRPPMPFMPWPHTQTQQQQQTQQQS

AT1G08970.3 nuclear factor Y, subunit C9

4.3e-59

58.06

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Query:  AGQLSY-SNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQ--QQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADED
        +G ++Y +NPYQT PM    T A T+      +  +  P QLA+ Q     HQQQQQQQ  QQLQ FW NQ +EIE+TTDFKNHSLPLARIKKIMKADED
Subjt:  AGQLSY-SNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQ--QQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADED

Query:  VRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASIPVVGSPADLPYYYVPS-QHPV
        VRMISAEAPV+FA+ACEMFILELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E LG I + ++P   + A  PY Y+P+   P+
Subjt:  VRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASIPVVGSPADLPYYYVPS-QHPV

Query:  GATGMIMGKQLDQANMYGAASQQPRPPMPFMPWPHTQTQQQQQTQQQS
        G  GM+MG      N  GA      PP P+M  P  Q Q   Q  Q++
Subjt:  GATGMIMGKQLDQANMYGAASQQPRPPMPFMPWPHTQTQQQQQTQQQS

AT1G08970.4 nuclear factor Y, subunit C9

4.3e-59

58.06

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Query:  AGQLSY-SNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQ--QQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADED
        +G ++Y +NPYQT PM    T A T+      +  +  P QLA+ Q     HQQQQQQQ  QQLQ FW NQ +EIE+TTDFKNHSLPLARIKKIMKADED
Subjt:  AGQLSY-SNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQ--QQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADED

Query:  VRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASIPVVGSPADLPYYYVPS-QHPV
        VRMISAEAPV+FA+ACEMFILELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E LG I + ++P   + A  PY Y+P+   P+
Subjt:  VRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASIPVVGSPADLPYYYVPS-QHPV

Query:  GATGMIMGKQLDQANMYGAASQQPRPPMPFMPWPHTQTQQQQQTQQQS
        G  GM+MG      N  GA      PP P+M  P  Q Q   Q  Q++
Subjt:  GATGMIMGKQLDQANMYGAASQQPRPPMPFMPWPHTQTQQQQQTQQQS

AT1G56170.1 nuclear factor Y, subunit C2

7.8e-69

70.42

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Query:  MDQSERQQQSQQPAGGVGAGQLSYSNP--YQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKN
        M+QSE  QQ QQ       G + Y  P  YQ+ P+                    N+   +A+QQA HFHH  QQQQQQQLQMFWANQMQEIE TTDFKN
Subjt:  MDQSERQQQSQQPAGGVGAGQLSYSNP--YQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKN

Query:  HSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIP-VVG
        H+LPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLR+WIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG+TK +IP VVG
Subjt:  HSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIP-VVG

Query:  SPADLPYYYVPSQ
        SP   PYYY+  Q
Subjt:  SPADLPYYYVPSQ

AT1G56170.2 nuclear factor Y, subunit C2

7.8e-69

70.42

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Query:  MDQSERQQQSQQPAGGVGAGQLSYSNP--YQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKN
        M+QSE  QQ QQ       G + Y  P  YQ+ P+                    N+   +A+QQA HFHH  QQQQQQQLQMFWANQMQEIE TTDFKN
Subjt:  MDQSERQQQSQQPAGGVGAGQLSYSNP--YQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKN

Query:  HSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIP-VVG
        H+LPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLR+WIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG+TK +IP VVG
Subjt:  HSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIP-VVG

Query:  SPADLPYYYVPSQ
        SP   PYYY+  Q
Subjt:  SPADLPYYYVPSQ

Sequences

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CDS sequence

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ATGGATCAATCAGAGCGTCAGCAACAATCACAGCAGCCTGCAGGTGGCGTCGGTGCAGGCCAGTTATCATATTCTAATCCTTACCAAACGGCGCCAATGGTCGCCTCCGG
AACTCCTGCTATTACGATTCCCCCAACTCAGCCACCGTCCAGTTTTTCTAATTCTCCGCATCAGCTTGCCTATCAGCAAGCTCAGCACTTTCACCACCAGCAGCAACAGC
AGCAGCAGCAACAGCTCCAAATGTTTTGGGCAAACCAAATGCAAGAGATTGAACAAACAACTGACTTTAAGAACCACAGTCTCCCCCTCGCCCGAATCAAGAAAATAATG
AAAGCGGATGAAGACGTCCGAATGATTTCAGCTGAAGCACCAGTTATATTCGCAAAGGCATGTGAAATGTTCATCTTGGAGTTGACTCTGCGATCCTGGATTCATACAGA
AGAGAACAAAAGGAGAACCTTACAGAAGAATGATATTGCAGCTGCAATTTCACGGACCGATGTCTTTGATTTCTTGGTCGATATTATTCCTAGAGACGAACTGAAAGAGG
AAGGCCTCGGAATCACAAAAGCTTCCATTCCCGTAGTCGGTTCCCCTGCTGATCTTCCTTATTACTATGTTCCATCCCAGCATCCAGTGGGTGCTACAGGTATGATCATG
GGGAAGCAATTAGATCAAGCAAACATGTACGGTGCTGCTTCCCAACAGCCCCGACCACCGATGCCTTTCATGCCATGGCCGCACACTCAAACTCAGCAGCAGCAACAAAC
TCAGCAGCAAAGTGATGCATAG

mRNA sequence

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Protein sequence

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MDQSERQQQSQQPAGGVGAGQLSYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIM
KADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPVGATGMIM
GKQLDQANMYGAASQQPRPPMPFMPWPHTQTQQQQQTQQQSDA

Spg006223 (gene) of Sponge gourd (cylindrica) v1 genome