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Spg006227 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg006227
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionglycine-rich protein-like
Genome locationscaffold4:5816238..5817672
RNA-Seq ExpressionSpg006227
SyntenySpg006227
Gene Ontology termsNA
InterPro domainsIPR010800 - Glycine rich protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589124.1 hypothetical protein SDJN03_17689, partial [Cucurbita argyrosperma subsp. sororia]7.3e-1961.22Show/hide
Query:  MSSKAFLVLGLLFTIVVLLSSEEVMATARDLKSVDEAMMETNGDGVEGVKRRFGGGHHGHRHHRHCHHGCCGHHHGRCSRCCSF---AGEAVDAEPNN
        M+SKAF++LGLLF +V+LLSSEE  ATAR LKSV+EA+METNGDG+E  KRRFGGGHHGHRHH   HH     H   C   CS      E   A+PNN
Subjt:  MSSKAFLVLGLLFTIVVLLSSEEVMATARDLKSVDEAMMETNGDGVEGVKRRFGGGHHGHRHHRHCHHGCCGHHHGRCSRCCSF---AGEAVDAEPNN

XP_022930749.1 glycine-rich protein DC7.1-like [Cucurbita moschata]1.5e-1963.27Show/hide
Query:  MSSKAFLVLGLLFTIVVLLSSEEVMATARDLKSVDEAMMETNGDGVEGVKRRFGGGHHGHRHHRHCHHGCCGHHHGRCSRCCSF---AGEAVDAEPNN
        M+SKAF++LGLLFTIV+LLSSEE  ATAR LKSV+EA+METNGDG+E  KRRFGGGHHGHRHH   HH     H   C   CS      E   A+PNN
Subjt:  MSSKAFLVLGLLFTIVVLLSSEEVMATARDLKSVDEAMMETNGDGVEGVKRRFGGGHHGHRHHRHCHHGCCGHHHGRCSRCCSF---AGEAVDAEPNN

XP_022989495.1 glycine-rich protein DC7.1-like [Cucurbita maxima]4.3e-1960.2Show/hide
Query:  MSSKAFLVLGLLFTIVVLLSSEEVMATARDLKSVDEAMMETNGDGVEGVKRRFGGGHHGHRHHRHCHHGCCGHHHGRCSRCCSF---AGEAVDAEPNN
        M+SKAF++LGLLF +V+LLSSEE  ATAR LKSV+EA+METNGDG+E  KRRFGGGHHGH+HH         HHH  C   CS      E   A+PNN
Subjt:  MSSKAFLVLGLLFTIVVLLSSEEVMATARDLKSVDEAMMETNGDGVEGVKRRFGGGHHGHRHHRHCHHGCCGHHHGRCSRCCSF---AGEAVDAEPNN

XP_023529828.1 glycine-rich protein DC7.1-like [Cucurbita pepo subsp. pepo]2.1e-1860.2Show/hide
Query:  MSSKAFLVLGLLFTIVVLLSSEEVMATARDLKSVDEAMMETNGDGVEGVKRRFGGGHHGHRHHRHCHHGCCGHHHGRCSRCCSF---AGEAVDAEPNN
        M+SKAF++LGLLF +V+LLSSEE  ATAR LKSV+E +METNGDG+E  KRRFGGGHHGHRHH   HH     H   C   CS      E   A+PNN
Subjt:  MSSKAFLVLGLLFTIVVLLSSEEVMATARDLKSVDEAMMETNGDGVEGVKRRFGGGHHGHRHHRHCHHGCCGHHHGRCSRCCSF---AGEAVDAEPNN

XP_038888674.1 glycine-rich protein-like [Benincasa hispida]1.0e-2878.72Show/hide
Query:  MSSKAFLVLGLLFTIVVLLSSEEVMATARDLKSVDEAMMETNGDGVEGVKRRFGGGHHGHRHHRHCHHGCCGHHH-GRCSRCCSFAGEAVDAEP
        MSSKAF+ LG LF +VVLLSSEEV A A DLKSV++AMMETNG G E VKRRF  GHHG   HRHCHHGCCGHHH G CSRCCSFAGEAVDAEP
Subjt:  MSSKAFLVLGLLFTIVVLLSSEEVMATARDLKSVDEAMMETNGDGVEGVKRRFGGGHHGHRHHRHCHHGCCGHHH-GRCSRCCSFAGEAVDAEP

TrEMBL top hitse value%identityAlignment
A0A0A0K5A1 Uncharacterized protein2.4e-0751.92Show/hide
Query:  MSSKAFLVLGLLFTIVVLLSSEEVMATARDLKSVDEAMMETNGDGVEGVKRRFGGGHHGHRHH---RHCHHGCCGHHHGRCSRCCSFAGEA--VD----A
        MSSK+F++LGLLF  VVL SSE +  TARD K + EA MET    V+ V+R   GG H          C+ GCC    GRC RCCSFAGEA  VD    A
Subjt:  MSSKAFLVLGLLFTIVVLLSSEEVMATARDLKSVDEAMMETNGDGVEGVKRRFGGGHHGHRHH---RHCHHGCCGHHHGRCSRCCSFAGEA--VD----A

Query:  EPNN
        +PNN
Subjt:  EPNN

A0A6J1C3E0 glycine-rich protein DC7.1-like2.9e-1358.82Show/hide
Query:  MSSKAFLVLGLLFTIVVLLSSEEVMATARDLKSVDEAMMETNGDGVEGVKRRFGGGHHGHRHHRHCHHGCCGHHHGRCSRCCSFA--GEAVDAE-----P
        MSSK  + LGLLF +VVLLSSEEV ATARDLKSV+E M ETN +G+E  KR   G HH HR  RHCH     HHH      CSFA   EAVD E     P
Subjt:  MSSKAFLVLGLLFTIVVLLSSEEVMATARDLKSVDEAMMETNGDGVEGVKRRFGGGHHGHRHHRHCHHGCCGHHHGRCSRCCSFA--GEAVDAE-----P

Query:  NN
        NN
Subjt:  NN

A0A6J1C3T3 glycine-rich protein 3 short isoform-like2.6e-1449.21Show/hide
Query:  MSSKAFLVLGLLFTIVVLLSSEEVMATARDLKSVDEAMMETNGDGVEGVK-------------------RRFGGGHHGHRHH--------------RHCH
        M+SKAF++LGLLF +VVLLSS+    TARDLK   E +MET  DGVE  K                    R+GGG+ GH  H              RHCH
Subjt:  MSSKAFLVLGLLFTIVVLLSSEEVMATARDLKSVDEAMMETNGDGVEGVK-------------------RRFGGGHHGHRHH--------------RHCH

Query:  HGCCGHHHGRCSRCCSFAGEAVDAEP
        HGCCG +HG C RCCS+AGEAVD EP
Subjt:  HGCCGHHHGRCSRCCSFAGEAVDAEP

A0A6J1ESD5 glycine-rich protein DC7.1-like7.2e-2063.27Show/hide
Query:  MSSKAFLVLGLLFTIVVLLSSEEVMATARDLKSVDEAMMETNGDGVEGVKRRFGGGHHGHRHHRHCHHGCCGHHHGRCSRCCSF---AGEAVDAEPNN
        M+SKAF++LGLLFTIV+LLSSEE  ATAR LKSV+EA+METNGDG+E  KRRFGGGHHGHRHH   HH     H   C   CS      E   A+PNN
Subjt:  MSSKAFLVLGLLFTIVVLLSSEEVMATARDLKSVDEAMMETNGDGVEGVKRRFGGGHHGHRHHRHCHHGCCGHHHGRCSRCCSF---AGEAVDAEPNN

A0A6J1JMI7 glycine-rich protein DC7.1-like2.1e-1960.2Show/hide
Query:  MSSKAFLVLGLLFTIVVLLSSEEVMATARDLKSVDEAMMETNGDGVEGVKRRFGGGHHGHRHHRHCHHGCCGHHHGRCSRCCSF---AGEAVDAEPNN
        M+SKAF++LGLLF +V+LLSSEE  ATAR LKSV+EA+METNGDG+E  KRRFGGGHHGH+HH         HHH  C   CS      E   A+PNN
Subjt:  MSSKAFLVLGLLFTIVVLLSSEEVMATARDLKSVDEAMMETNGDGVEGVKRRFGGGHHGHRHHRHCHHGCCGHHHGRCSRCCSF---AGEAVDAEPNN

SwissProt top hitse value%identityAlignment
P23137 Glycine-rich protein1.6e-0538.39Show/hide
Query:  MSSKAFLVLGLLFTIVVLLSSE----EVMATARDLKSVDE---------AMMETNGDGVEGVKRRFGGGHHGHRHHRHCHHGCCGHHHGRCSRCCSFAGE
        M SKAFL LGL      L+SSE    E+  T+  +K   E            +  GDG  G  R  GGG +     R C +GCC   +  C RCCS+AGE
Subjt:  MSSKAFLVLGLLFTIVVLLSSE----EVMATARDLKSVDE---------AMMETNGDGVEGVKRRFGGGHHGHRHHRHCHHGCCGHHHGRCSRCCSFAGE

Query:  AVD----AEPNN
        A+D    A+P+N
Subjt:  AVD----AEPNN

Arabidopsis top hitse value%identityAlignment
AT2G05520.1 glycine-rich protein 35.4e-0445.28Show/hide
Query:  GDGVEGVKRRFGGGHHGHRHHRHCHHGCCGHHHGRCSRCCSFAGEAVDAEPNN
        G   +G   R GGG  G     +C HGCC   +  CSRCCS+AGEAV  +P +
Subjt:  GDGVEGVKRRFGGGHHGHRHHRHCHHGCCGHHHGRCSRCCSFAGEAVDAEPNN

AT2G05520.2 glycine-rich protein 35.4e-0445.28Show/hide
Query:  GDGVEGVKRRFGGGHHGHRHHRHCHHGCCGHHHGRCSRCCSFAGEAVDAEPNN
        G   +G   R GGG  G     +C HGCC   +  CSRCCS+AGEAV  +P +
Subjt:  GDGVEGVKRRFGGGHHGHRHHRHCHHGCCGHHHGRCSRCCSFAGEAVDAEPNN

AT2G05520.5 glycine-rich protein 31.9e-0430.63Show/hide
Query:  MSSKAFLVLGLLFTIVVLLSSEEVMATARDLKSVDEAMMETNGDGVEGVKRRFGGGHH---GHRHH-------------RHCHHGCCGHHHGRCSRCCSF
        M+SKA ++LGL   ++V+       +   + +S +    +  G G  G     GGG +   G R+               +C HGCC   +  CSRCCS+
Subjt:  MSSKAFLVLGLLFTIVVLLSSEEVMATARDLKSVDEAMMETNGDGVEGVKRRFGGGHH---GHRHH-------------RHCHHGCCGHHHGRCSRCCSF

Query:  AGEAVDAEPNN
        AGEAV  +P +
Subjt:  AGEAVDAEPNN

AT2G05520.6 glycine-rich protein 35.4e-0431.93Show/hide
Query:  MSSKAFLVLGLLFTIVVLLSSEEVMATARDLKSVDEAMME-------------TNGDGVEGVKRRF--GGGHH---------GHRHHRHCHHGCCGHHHG
        M+SKA ++LGL    V+L+ SE   A++  + S  +  ++              NG G +G    +  GGG +         G     +C HGCC   + 
Subjt:  MSSKAFLVLGLLFTIVVLLSSEEVMATARDLKSVDEAMME-------------TNGDGVEGVKRRF--GGGHH---------GHRHHRHCHHGCCGHHHG

Query:  RCSRCCSFAGEAVDAEPNN
         CSRCCS+AGEAV  +P +
Subjt:  RCSRCCSFAGEAVDAEPNN

AT2G05530.1 Glycine-rich protein family6.4e-0533.33Show/hide
Query:  MSSKAFLVLGLLFTIVVLLSSEEVMATARDLKSVDEAMMET-------------------------NGDGVEGVKRRFGGGHHGHRHHRHCHHGCCGHHH
        M+SKA ++ GL     VLL   EV A +  +KS     ++                          NG G  G     GGGH G   H +C +GCC   +
Subjt:  MSSKAFLVLGLLFTIVVLLSSEEVMATARDLKSVDEAMMET-------------------------NGDGVEGVKRRFGGGHHGHRHHRHCHHGCCGHHH

Query:  GRCSRCCSFAGEAVDAEPNN
          CSRCCS+AGEAV  +P +
Subjt:  GRCSRCCSFAGEAVDAEPNN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTCCAAAGCTTTCCTTGTCCTCGGTCTCCTTTTCACTATCGTCGTCCTCCTCTCCTCGGAGGAGGTTATGGCTACTGCGAGAGACTTGAAAAGCGTCGACGAAGC
CATGATGGAGACTAATGGAGATGGAGTTGAGGGCGTGAAGCGTCGTTTCGGCGGAGGCCACCACGGGCACAGGCACCACCGCCATTGCCACCACGGTTGTTGCGGTCACC
ACCACGGCCGTTGCAGTAGGTGCTGCAGCTTTGCTGGTGAGGCTGTTGATGCAGAGCCTAACAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTCCAAAGCTTTCCTTGTCCTCGGTCTCCTTTTCACTATCGTCGTCCTCCTCTCCTCGGAGGAGGTTATGGCTACTGCGAGAGACTTGAAAAGCGTCGACGAAGC
CATGATGGAGACTAATGGAGATGGAGTTGAGGGCGTGAAGCGTCGTTTCGGCGGAGGCCACCACGGGCACAGGCACCACCGCCATTGCCACCACGGTTGTTGCGGTCACC
ACCACGGCCGTTGCAGTAGGTGCTGCAGCTTTGCTGGTGAGGCTGTTGATGCAGAGCCTAACAACTGA
Protein sequenceShow/hide protein sequence
MSSKAFLVLGLLFTIVVLLSSEEVMATARDLKSVDEAMMETNGDGVEGVKRRFGGGHHGHRHHRHCHHGCCGHHHGRCSRCCSFAGEAVDAEPNN